Basic Information

Insect: Pogonomyrmex californicus
Gene Symbol: Zfy2_1
Assembly: GCA_017141365.1
Location: JAEVLP010004623.1:50-6731[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.3 4.8e+02 2.4 3.2 1 23 46 68 46 68 0.96

2 15 0.00051 0.076 14.4 0.3 2 23 74 95 73 95 0.97

3 15 0.034 5.1 8.7 7.2 2 23 383 405 382 405 0.96

4 15 2.1 3.1e+02 3.0 1.0 1 23 472 494 472 494 0.82

5 15 4.2 6.3e+02 2.1 1.3 2 23 671 692 670 692 0.88

6 15 0.11 16 7.1 0.1 3 23 709 729 707 729 0.97

7 15 0.0092 1.4 10.5 0.3 1 23 737 759 737 759 0.98

8 15 0.15 23 6.6 1.0 2 23 857 878 856 878 0.95

9 15 0.12 18 6.9 0.7 3 23 890 910 888 910 0.96

10 15 0.00086 0.13 13.7 0.4 1 23 987 1009 987 1009 0.98

11 15 0.033 4.9 8.7 0.3 1 23 1085 1107 1085 1107 0.97

12 15 2.5e-05 0.0038 18.5 0.7 1 23 1113 1135 1113 1135 0.97

13 15 0.0049 0.73 11.3 2.6 1 23 1203 1225 1203 1225 0.97

14 15 0.0008 0.12 13.8 1.7 1 23 1231 1253 1231 1253 0.99

15 15 0.42 62 5.2 0.6 2 23 1349 1370 1348 1370 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.3	4.8e+02	2.4	3.2	1	23	46	68	46	68	0.96
2	15	0.00051	0.076	14.4	0.3	2	23	74	95	73	95	0.97
3	15	0.034	5.1	8.7	7.2	2	23	383	405	382	405	0.96
4	15	2.1	3.1e+02	3.0	1.0	1	23	472	494	472	494	0.82
5	15	4.2	6.3e+02	2.1	1.3	2	23	671	692	670	692	0.88
6	15	0.11	16	7.1	0.1	3	23	709	729	707	729	0.97
7	15	0.0092	1.4	10.5	0.3	1	23	737	759	737	759	0.98
8	15	0.15	23	6.6	1.0	2	23	857	878	856	878	0.95
9	15	0.12	18	6.9	0.7	3	23	890	910	888	910	0.96
10	15	0.00086	0.13	13.7	0.4	1	23	987	1009	987	1009	0.98
11	15	0.033	4.9	8.7	0.3	1	23	1085	1107	1085	1107	0.97
12	15	2.5e-05	0.0038	18.5	0.7	1	23	1113	1135	1113	1135	0.97
13	15	0.0049	0.73	11.3	2.6	1	23	1203	1225	1203	1225	0.97
14	15	0.0008	0.12	13.8	1.7	1	23	1231	1253	1231	1253	0.99
15	15	0.42	62	5.2	0.6	2	23	1349	1370	1348	1370	0.97

Sequence Information

Coding Sequence: ATGACGAGCTTAGAGACACGAGGCAAAAACGGGCACAGTCCAGTCGAAAATCATTGCCCTGCGTGTTCGTATGTCGCATTGAACGTGAAAGATCTTGAAAATCACCAAAGACTGCATCATTTGAAAAGAAAATTCTTTCGATGCGCAAAATGCGATTACGTGACCCACATCAGAGCGCGTTATACTAAGCATGTTAAATATCATTCTATGCCGATGATCAAGTGCGATGCTTGTGATTTTAGTTCAGCGTATAAGTGGAATCTAGAAAGACACATGCGGAATCATGGAGGTGGAGGTGCTTTCAAATGTCGTGCATGTAATTTTACTGCTGATATCCGTCAGAGCTTAACGGTGCATGAGTCGTATCATCATGACCCACCTGTGGGTCAGGTCAACCGCAAAAGTAATAACGCTTTCGAACGTAAGCCACGAAATAGTCCAAAACGTTACAATCAGGTTGGAGCCAGTGATTTTCGAGAAGCATTAAGTAAAACCGGAAGCACAACCACGTCGGCTGGTTCTACTGATTCCTTTGTATCAGATCACTCGTTAATTTCGATAGACGATAAGAAAAGCGCCCTGGCTAACGCGGAGTGTATTGCGTTAAAATGCGAGGAAAAAGGTTGCCAATTTATAACAGCCTGGGACTCCGAGATGCAGCGTCACTTAGCGGAATCCCATTCTTCGGTTGTTCCTTCGAAGCCGAGAAAACCACTGCCAATGTTAATTCCACTAAGCCTAGCGAGTACGCCAAAGTCCAATAATACGTTCAGTGGTATGAGTAGCAATGGGCCACCTACGACTCTATTGAAGGTTCCGCGCGTCAGAGTAAGACCTGAGCTGGCGCAAATTGCAAGAGATACAGAACTAGCTAAGATGTATGGGAATAAAGAGGCTGCGAATTCGAAGAGGAATCTCAATACCGCGGCTGGAATATTTGAGAGAAAGAATGCCTCCTTTTTCGATAAATTGAAAGAGAAACTAACAACGACAGCGACGTCGATTAATAACGGTGTGCCGGAGGTAGCCGTAAGTAGTGAGAACGACTTGAAATGCTGGTGTACGTTTAAAGCTAGTAGCATGGAAGAGCTGGCCTGCCACAAACAGACACACCACACTGCGCTCAGCGTGTCCATGGGTACGACTCGTTGCCCTAAGTGTAGAAGACGTTGCAAGAGTACGACTGATCTTCAAATGCATATGCAATCCTGCCATTCGCGCAACGACACAACGTCGTCCATCAATAGTAGTTTAGAGAAAGTAACAAATCGTTCGGATATCCGCATGACTTCGTACCGTGACGAATACTCTCCGTTTTCATCGCAAACGGATTGGGATGCGAATCTCAGAGGACTAAATTCTTCTGGATCTTCGTTTGAAGGTGGTTCGACACATCCGAGCGGGCGACGGGTATTCAAATGTCCCCATTGTCCATTTTGGGCTTCCACCGCAAGTCGCTTTCACGTACATATAGTCGGTCATTTAAACCGAAAGCCATTCGAGTGTTCAATGTGCGCGTATCGTTCTAACTGGCGATGGGACATCACAAAACATATTAAGCTTAAAGCGGCTAAAGACGCAGTGCATACGAGCGCCAGAGTGCTCATGACGGATGAGACAGGTCGACGGAATTATTCCAAATATAACAAATATCTCGCACAGGTAGAACATCAATCGTGGGATGAAGATCGTATGGAGCAACGTAGCATAGAAGAAACGAACTCTGAAGAATTGTCGACAAAATTGTTGATTGTAGGCAATAAGGAGTATACTTCAACAACTGGTCCAACGTCACAATCTCCCGTTACAATTTTACCATCGAACGAGGCAAATCAAAATAATCATAATGTGGACGTGAGTCTGCGACCTCCACCGCCGCTCAAAGCAGCGATTAGAAGTCGTGGACAATCTTTATTGAAGAATAGTCCTATCACGATGCACATACAAACTCCTAGTGGCGGTGGCGCGGTTTCTATATCTCCTGCGATAGATGAGAAACGCACTCAGTGGAAATGTAAACGTTGTAATTATCGAGATTTCAACAAAGATAATGTACTATTGCATGTTAAATCTCACTATGAATCTGTTGATCAAGAGTCTATTGAAGAAAGGAATCCATTTGGTTGTGAGGACTGTCCGTTTTCAGCATCGGATGCTGCTACTCTGTCCCTTCACAGGATGAACCATCGGCCGAATTTAGAAGCTATATTTAAATGCTATCTTTGTCCATACTACGTTAGTACAAAGGCAGAACTGTTGGATCACGCTAGACTTCATGGGGAAGAGCTAGCAGCTATGCATCAGCAGAATATGGAATGTTCGTCACCAAATTCCAAGAGTAAATTGCAACAAGTTTCAATTTCTGAAGGAAGTGGTTCTCGAGCAAAGGATGAATCATCTATAGAACAAGTAATTCAGATAACATCGCGTAACAACGCAACGATGGCTTCAAAGACTCAACCACCACCACCACCACTACCACCGTCACTTCTTCTGGACACCCGGGCTCTTCCGGATGCTCCACTGGTTTGGGTATCGCGGTTAGATGGTACCTTGACGAAAATGCTCAAGTGTCGTCATTGTCCCTACATCTCGTCACGACGTGCCGAAGTGCGCGATCACGAGACGATGCACGTTGACGTTCCAACTCAGGGCCCCCTAATCGCCTGTACAGACTGTAGCTTTACTTGTTCGCGTCGAGAAGTTATGATTGCGCACACAGAAATGCACGCGGGATCTCTGGGTACTGTTCACTGTCTTGTGGATGAAACGCGACCTGACTCTCAACAGGTGAGCGACCTAGCTACCCTGCTTGGTATGACACACACTCCGGTACTAGGCACCGAGCCCGATCTTCGAGACTCGCGTTTGGTACACTGCTGTGACAAATGCCCGGCACGGTTCCTGTGCGAAAAAGAGTTGCGCATTCACTTGCGATACCACACAACAGAACTGGCGTATTCATGCCAATGGTGTTCATACGCAGCACGACAACCATCCCATCTGCTAGCTCATCAGAAGGCACATTCGACAGAGTATCAAGAACGCACCAAGTATCTGTTGTCTTTATATGGTCACTCGCAACGTTACCCACCGCCTGCTACAGCGTGCGTCGAAACAGAGAATCGGGAGAGCAATGATAACACATCAAATGTTGCATGGATCGTTGTTGAAATCAATGAGAATTCAAACAATTCTTATAACAATGTTAATAATGCCTCTTCAACTGTTCAAAGAACCGGGAATCAAGTGTTTACATGCGCTAAGTGTCCAGCACGATATTTCAAACTCGATGCCCTAGAGTACCACATGACGCTGCATGGCTCAAATAACCGATTCAAATGTAACGATTGTGACTACTCGTCGAAAACAGCACAAAATCTGTTAAAACATCAGGTTGTTCATCGACGGCACGGTGAGACTGGTGAAGCGGTTGCGGAATCATCTACAGCCGCTGCCACTTCCGCTGCTGACCGCACCTTGACATCCTCCCCGGGATCACCAATTCAGTCGCCACCTGATCCACAATTCGGTATCTTTATGCGCGGCAATCCAAATTTTGTTTATCCAGGTTACTTACGGAATGGTCGTCTAAAGGAAAAACGTTACAAGTGCCACAAATGTCCGTCCGCTTTCGAAAAGCGTGAACAATATAGAGTTCATCTGACTTTGCACGGCGCCAAACAGCGCTATCGTTGCGATACGTGCGACTATTCGGTCAAATACTATGCGAATTACATACAGCATCTGAAGAAGCATCAAGCGAATGCGGAAGCTCAAGCGTCGCGGAGACAATTCGAAGATGATCGGATCTCGGTGGATAGCGATAGCATCGCCGATATATCCGCATCAGTTTCGTCACGTAAATCGTCGCGATCATCCGCTGCTGCTGGTAGCGCGCTCGCGATGTTGCCTGCCGCTAACGCGTCCAACGTTAATAACAACGCTACCTTACAGACATCCAATCAGGATAAGCAAAGCGTGTTGTTGATGCAAAAGAAAGGCATTATTCCATCAACGGGTGAAACCGATGCGGAGACGATCCGTTGTCAAAGTTGTCCGTTCTCCACCACCGACAAGGATGTCATGGACGCACATAAACGTCGCCATGGCATCGAGCGTATGACTCCGCCATGCCCTCATTGTGACTACATTCCGCGAAAAGATGAGAACATTGGTGAGCATGTTAGACTCCATTTCACGAGATTATACAAGCCCGAATCCTATCTTATTGTCGAATTGCTGACGTTGACGATGGAAAAGATACATGTGAACAACAAGGACGAGAAGAGTGGTCAACGATTGAAGGAATTATTGTTTAAAGAATGCGCCGATGGTAGATTTCTGCCGCTTACCGAATCGATAAATTCTGTTTCTCTAAGTACTTCTTCGACCATGAAGGCTGTTAAGGAAAAAGTCATTGTAGATCCGAACACAGGCGAGACCAAGCACCGTCTCGCGTAA
Protein Sequence: MTSLETRGKNGHSPVENHCPACSYVALNVKDLENHQRLHHLKRKFFRCAKCDYVTHIRARYTKHVKYHSMPMIKCDACDFSSAYKWNLERHMRNHGGGGAFKCRACNFTADIRQSLTVHESYHHDPPVGQVNRKSNNAFERKPRNSPKRYNQVGASDFREALSKTGSTTTSAGSTDSFVSDHSLISIDDKKSALANAECIALKCEEKGCQFITAWDSEMQRHLAESHSSVVPSKPRKPLPMLIPLSLASTPKSNNTFSGMSSNGPPTTLLKVPRVRVRPELAQIARDTELAKMYGNKEAANSKRNLNTAAGIFERKNASFFDKLKEKLTTTATSINNGVPEVAVSSENDLKCWCTFKASSMEELACHKQTHHTALSVSMGTTRCPKCRRRCKSTTDLQMHMQSCHSRNDTTSSINSSLEKVTNRSDIRMTSYRDEYSPFSSQTDWDANLRGLNSSGSSFEGGSTHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSMCAYRSNWRWDITKHIKLKAAKDAVHTSARVLMTDETGRRNYSKYNKYLAQVEHQSWDEDRMEQRSIEETNSEELSTKLLIVGNKEYTSTTGPTSQSPVTILPSNEANQNNHNVDVSLRPPPPLKAAIRSRGQSLLKNSPITMHIQTPSGGGAVSISPAIDEKRTQWKCKRCNYRDFNKDNVLLHVKSHYESVDQESIEERNPFGCEDCPFSASDAATLSLHRMNHRPNLEAIFKCYLCPYYVSTKAELLDHARLHGEELAAMHQQNMECSSPNSKSKLQQVSISEGSGSRAKDESSIEQVIQITSRNNATMASKTQPPPPPLPPSLLLDTRALPDAPLVWVSRLDGTLTKMLKCRHCPYISSRRAEVRDHETMHVDVPTQGPLIACTDCSFTCSRREVMIAHTEMHAGSLGTVHCLVDETRPDSQQVSDLATLLGMTHTPVLGTEPDLRDSRLVHCCDKCPARFLCEKELRIHLRYHTTELAYSCQWCSYAARQPSHLLAHQKAHSTEYQERTKYLLSLYGHSQRYPPPATACVETENRESNDNTSNVAWIVVEINENSNNSYNNVNNASSTVQRTGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCNDCDYSSKTAQNLLKHQVVHRRHGETGEAVAESSTAAATSAADRTLTSSPGSPIQSPPDPQFGIFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRQFEDDRISVDSDSIADISASVSSRKSSRSSAAAGSALAMLPAANASNVNNNATLQTSNQDKQSVLLMQKKGIIPSTGETDAETIRCQSCPFSTTDKDVMDAHKRRHGIERMTPPCPHCDYIPRKDENIGEHVRLHFTRLYKPESYLIVELLTLTMEKIHVNNKDEKSGQRLKELLFKECADGRFLPLTESINSVSLSTSSTMKAVKEKVIVDPNTGETKHRLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00127818;
90% Identity: iTF_01228626;
80% Identity: -