Basic Information

Insect: Pogonomyrmex californicus
Gene Symbol: ZBTB41
Assembly: GCA_017141365.1
Location: JAEVLP010004822.1:67140-68962[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 5.2e-05 0.0078 17.5 0.5 1 23 84 106 84 106 0.95

2 12 1.8e-05 0.0027 18.9 0.5 2 23 113 134 113 134 0.97

3 12 4.5e-06 0.00067 20.9 5.8 1 23 167 189 167 189 0.95

4 12 0.00038 0.056 14.8 4.6 2 23 195 216 194 216 0.97

5 12 0.00045 0.067 14.6 0.2 1 23 221 243 221 243 0.98

6 12 2.3e-06 0.00035 21.8 2.1 1 23 251 273 251 273 0.98

7 12 0.18 27 6.4 3.0 1 23 279 302 279 302 0.94

8 12 0.00012 0.017 16.4 0.3 3 23 315 335 313 335 0.96

9 12 6.5e-07 9.6e-05 23.5 1.8 1 23 341 363 341 363 0.96

10 12 1.7e-08 2.5e-06 28.5 0.2 1 23 369 391 369 391 0.98

11 12 2.6e-07 3.9e-05 24.8 1.0 1 23 397 419 397 419 0.98

12 12 0.00032 0.048 15.0 0.8 1 21 425 445 425 446 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	5.2e-05	0.0078	17.5	0.5	1	23	84	106	84	106	0.95
2	12	1.8e-05	0.0027	18.9	0.5	2	23	113	134	113	134	0.97
3	12	4.5e-06	0.00067	20.9	5.8	1	23	167	189	167	189	0.95
4	12	0.00038	0.056	14.8	4.6	2	23	195	216	194	216	0.97
5	12	0.00045	0.067	14.6	0.2	1	23	221	243	221	243	0.98
6	12	2.3e-06	0.00035	21.8	2.1	1	23	251	273	251	273	0.98
7	12	0.18	27	6.4	3.0	1	23	279	302	279	302	0.94
8	12	0.00012	0.017	16.4	0.3	3	23	315	335	313	335	0.96
9	12	6.5e-07	9.6e-05	23.5	1.8	1	23	341	363	341	363	0.96
10	12	1.7e-08	2.5e-06	28.5	0.2	1	23	369	391	369	391	0.98
11	12	2.6e-07	3.9e-05	24.8	1.0	1	23	397	419	397	419	0.98
12	12	0.00032	0.048	15.0	0.8	1	21	425	445	425	446	0.96

Sequence Information

Coding Sequence: ATGTTTCCATTTTTATTTTTGAAGAATGATTTAACGTACAGCCAACTACCGTTTTCCGAAGACTATTACCCGGTGTTCTCTAAACTCGATCTGATGAAGAAGAACGGAGAACCCACCAAGTCCCCGTCAAAGTGCTCGGAACCGACGGCAGATACGACCGATGAGACAGCAGCCTCAACGAATCCCGAACAAGATGCCATAAAGCAAGAGGTAAATGATGAGGATGATGAGGAAGATCATCCTTTGGTGTATCACTGCTCGGTTTGTGGTGTCTTCTTTGCCTCGCAATCCTTGTTGACCAATCATGAGATCGAGCACAAAGGTAAGCGGAAGAACACGTGTGCCCAATGTGGCCGAGTCTTCAGAACCGGTATCAGTCTTCGCAAACACATGAAGGCACATGCGGTACGTAAAAGCAGTCGTAAAGGCAATTCTTCCGGAGTGTCCGGCCGTACGGCGTCATTGAAGAAAGTGAAAAAGGAGAAGCCCGAAGTGGAATTTCTTTGCAAGACGTGTAACAAGGTCTTCCGGCACAAGAGCAATTATCAGAAGCATTTGTTGCGCCACACGGTAGGCGATCTCCCCTGCAAGCATTGCTCCAAGAAGTTCCGGTTGTTTCGCGACCTAACGAGACATGAGAAGACGCATTTTCTACCGAGCTATACGTGCAAAGAGTGTGATTATGAAACTACCGTTCTAGCTGCTTTGAGCATCCACATGACGCGACACATGGACAAGGCAGACTTACCGTTCAAGTGCAACGAATGCGACAAGCGTTTCCGGAAGAAGCTCGATCTTCAGGAGCACTATAACATTCACTCGGGCGAGAAGCCATTCGTCTGTCAGCTCTGCAACAACGCTTTCTATTTGAGACGACAACTCTCCGCGCATTGCAGACGCAACCATCCCGAGCTGAAGGCCAACAAAGTGACCAGCACCGCCTGTGACATTTGCGGTCGTGTACTGGCTACGAAAAGATCACTTTTCCGTCACAAGGAAAGTCACAATCCGACGAAATTGTACCTCTGTGACTACTGTGGAAAGAGTCTTAGTAGTGCTGAACATCTGAAGAAGCACAGGCGGATCCACACCGGGGAGAAACCATACGTCTGTGATATCTGCGGAAAGGGTTTCACCGACTCCGAAAATCTGAGAATGCACAGGAGGGTGCACACGGGGGAGAAACCGTATAAATGCGATCAATGCCCGAAGGCGTTCTCGCAGAGGTCAACGTTGACGATTCACAAACGCGGACACACCGGGGAACGACCTTACGTTTGCCAAATTTGCCAACGTGGATTCTCTTGCCAGGGCAACTTGACGGCACACCAGAAGTCTACATGTGTTTAA
Protein Sequence: MFPFLFLKNDLTYSQLPFSEDYYPVFSKLDLMKKNGEPTKSPSKCSEPTADTTDETAASTNPEQDAIKQEVNDEDDEEDHPLVYHCSVCGVFFASQSLLTNHEIEHKGKRKNTCAQCGRVFRTGISLRKHMKAHAVRKSSRKGNSSGVSGRTASLKKVKKEKPEVEFLCKTCNKVFRHKSNYQKHLLRHTVGDLPCKHCSKKFRLFRDLTRHEKTHFLPSYTCKECDYETTVLAALSIHMTRHMDKADLPFKCNECDKRFRKKLDLQEHYNIHSGEKPFVCQLCNNAFYLRRQLSAHCRRNHPELKANKVTSTACDICGRVLATKRSLFRHKESHNPTKLYLCDYCGKSLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMHRRVHTGEKPYKCDQCPKAFSQRSTLTIHKRGHTGERPYVCQICQRGFSCQGNLTAHQKSTCV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00015547;
90% Identity: iTF_01354776;
80% Identity: -