Pcal019190.1
Basic Information
- Insect
- Pogonomyrmex californicus
- Gene Symbol
- -
- Assembly
- GCA_017141365.1
- Location
- JAEVLP010004950.1:52002-57814[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6 7.7e+03 -2.0 0.0 21 31 959 969 949 973 0.81 2 2 2.9e-09 6.3e-06 27.1 0.2 2 46 1314 1360 1313 1360 0.93
Sequence Information
- Coding Sequence
- ATGGAAGAAACGAATAAACTTACACGGAACGATGTCGACATATCGGCACCTTCTGTTCCTTTAACTGAATCACCCAGGAAATGCAACTTGTCATTTTCAATTAACTTTGACTTCAACGATGTTAATAGCGAAAACTCGACCGATTCCGAAAATGCAGATCTACAAATTGATATATCCGAGGTGGATAATTATGAGCCATCCAGTAAGCACAAGAGAGAGGCTGTTGAAGAAGCATCAGTACTTAATGAAATGGAAGAAGAGATTGAGAGACAACTCGATGCTAAAGCTGCCAAAACTAACTTAACTGCCACTAACGTTAAAAATATATTGAAACATGTAATTCCTTATGAACATTTAATGACAATGGTACAAAAATGGCTTCAAGACACAGAAAATGATGTTAACATTGGTCCTAAACTCACAAGAGCTAAAGCTAAAAAATTAGCAGCTGCAAAAGTCAGTATACCATGGCCTATTACTACAGCACAACAGACTTCTTCGGAAGTGCAAGCTTTGATTCAGGAGGAATTATCAGAAGATTCATCTGACGAGGAATATAATCCTGAACATGATAAACAGAGTGACGATGATAGGGAAGTAGAAAATATAATAAATAGTGATATAGAGTCACAGCTGTTGATGTCATCAAATAATAAGAATTTGGCTTCTTCTGAACAACAAACATCACCACAAATACAATATGATTCTGAAGGAATTTTTAAAATACCAGTTGTTCCTCCTGTTTCGATGGAAGAAGAAAGTATTGGTCAAAGAACACGTTCCAAATTTTCTTTGAGTGAAACTTCTTTGGAGGAAATAGAACAAGCATTTATACCACCTGATATAACTGCTGATATGACTGAGGATTGGGATTGTGAACTTGATGAAGATTGGGATAATTTTTTGAAAGAATTTACGCAACCTTTGACACAAGAACTAGCTGTAGAGGATGATCCGGAAGCAGATCCAGAATATAACATCTTGGAGGATGAAGAAACAGATTTATTGGATAAAGAAGAACTTAGGACGGATAGAGCAGTAGAAGTTCCTCGTAAGGAACAATATGATTTAATTGCAGAATTACTTGAATTAACTCCAATGTTTTCAACACAAGAACAAGAAGTGTCAAAAAAGAAGAAAGTTTTAGATAATATAACACCACCAATTGAAAATAGCACTATGAATTGCTCTGTGGCACATCTTTTACCAGTAGTTACAGAACCTGAATTGCCAAAATTGATCAATCCTGAACAACGTCTTCTATTAGCCACACAATTTCAGCAACACGTACAATTGATGGCACAACATTTTCTTTTACCGTCGATACCTTTCAGAAATGGCGTTAAACAAAATACAAAGTCTACATACTTAAAATCGGAAGAAACTTTAATTGCATTAGGTATAGAACAATTCTTACCATACGTTGCATCTATACCAAGAAAATTTCATTCAAAAAAAATGCAGTTGATTGATGCAACTCAACTTATTAGCGATTACCTGCTACCATGTAGAGACGCACGAGGAATGTTTCATCATATTAACAAACGTCGCGCTTCTAAAGATGAAAATCCAATCAAGCATTATTTTGAAAAAGGTTGCGCGCCTAAAATAATACATTACATAATACTTGAAAATAAACTTAAAGCTCCAAAGGATCAACCCATAGAACTTTTACCTGTAAGATGGCAAATGTATTTTCAAAAAAAACATAGAAATAATTCGGTAAAAAATAAAGATATATTTGATTCGTATCATAATTTTAATAAAGAAGACATTAACATGAATGCAATAATAAAATCGTATCCTAGTATTCCTAAAAATCATCTATTACGAAATCCAATTGTAAATATGTTACCAAAAATATTACCTGCAACTTCAAATCCAAAAGCTTCAGCTAAGATTGATAATTCTACTACACAAAGTTTTAAACTCGATAGCAGTGATAAAAAAATATCCGATAATAATACACAAAATATAGAAATTCATAAAAAGAAAACAGTATATAAAACGCATACAAATGTTTGCTCTTTAAAAGCAAATACTTCAGATGTAAAACTAACACAAACAGATAAATCATCAGATGTAAATAACACAAAATTAAATATTATATTACCTAGAAATTTAAAAATATCCAAAGAAAAAGAATCACAACAAATATCATTAGGATCACCACAAATACGAAAGACCACACCACGATTAGCAAAAACACGAAGTGCTCAAAATATGAAATTGATGGCACAAGCTTTAGGCTCAAAGAATTCGTCTAATTGCACTTTAAAATCTAAAGAAAAAGATATTATAGATAAGAACATTGATGAGCATTGTAGTTCATCAAAAGTTGATAACGAAGAAGAAATAGCAGAATTAATGTTAGCCAGTACTACGATAATAAAAGATCCTATAAGTAGAAAAAAAGCTAAGCAAACTAGAGAATTGGAAATTATCAAAAGATTATTAAAAGCTGAGAACCCGTTGAATGAAGAAGAACGTGAAGCAAAATTTGCAGCGTCGTATCTTCAGAAATTGCACTTAACATTGGAATCTAATAATCCAGAAACATTTAAGGCTGTGATAAAGTTATATTTGGATTACAGTGAAAAGTTAGAAAGTATTAATCGTATAGATGTTAATCCATCATTTTCTGAAGAATTAACAAATAAACAGATATTACAAGATACTGCAATGAAAAAAGACATATTAATTATTCAATTATACCAAGAGATCTGTAAAAAATTACAAAATTATCCAGAAATATGTACAGATTTTCTGTTATTTTTAAAACCACATCAAGCTGCAATGATTGGTAAATCTATAGAATATATGATGTTACAAAAGATGAATGATTTCGTTCATGTTGCACAAATATATTTTGCTAAGCAACCATCACGGATAGCAAAAATGATGCAAGCAATTACACAACTTTCATCTGATCCACATACAACTTTAGAAAATGTTCATACTGTTATAAGTTCTGTCTTTAAAGGTCATCCGCTCGTTATGGATTTATTCTTGCAAATTCTCCCTACTGCAAAACCTCCTGAAAGTTTATTTGCGCCTCATATGTTTGAAAACATGACGTGTCCATTAGGACCTTATGATAAAAATATGACTTACACTGAAAATGCATCAGAACTATATGAAAATATAGAATTATCAACGACAACATGTCAGGAAGACCCATATGGTGGAGAGAATTGTAAATGCGATTGTCACAATACGGATGATGCAAATTCAAAAAATAGTTCTGAACATTGTGTTTCCTGTGGCACACGATTTCTGAATGGAAAAATTTATCTTCAAACTCTTGAAGGATTACGACCTGCCAAAATTACATTTCCTGGGGAAGATCGGGAGAAATTAGAAAATATTGCACGTATATCGTTAAAGATTGCTGATAAAGCTATTCCATCAATTTCGTCTAAGAAACGACGGAAATCATCAAAAAATGAATCTAATCACGAAGATATTTCAAGTCAAAGAGAGAAACAATGCACTACAAGCTCACCGTTAAAAGATAACGAAGATAATGAAAAGGCAGTAACCAAATCTAAAAGAAATGTCAAATTTACACTCAAAACTGATCCAAAAAAAATTTTTAAAAGAATAAGTACTGAAGATCATGTAATTCCTGATAAAAGAATGCGTATGACTCAATACAAAAGTAAACGAGAAAAAAAGACTGAAGAAAGTGATGTTTTATCAGAACGAAATGAGTCTGATATTGTAAAACAAGAAAAAATAAATGAACTTACGGAGACGAAAACTAACAATTATATACAATTGTCAATGCAAGACGATTCGTTGAACACTGAATTAATTACAAAAACACAAATTTCTCCAAGTACAAGCAATAGTACTGGTTGTAATTTGAATAATAAAAATATAGAAGCAGGAATAATGGAAACTAATATGCAATCAAAATCTAATTTAATTAACAATAAACCATGGACACGTCAAGAAGATATGATATTGCTGCAAAGTATAAAAAAGGAATACTCAGAAAATTCATTCCTATTGATTAGCAAAAAATTAGAGAATCGTACTATTCATCAAGTGAAAGAGAGATGCCAAACTTTGCTTTCTTTATTGCAGAAAATGATGTAA
- Protein Sequence
- MEETNKLTRNDVDISAPSVPLTESPRKCNLSFSINFDFNDVNSENSTDSENADLQIDISEVDNYEPSSKHKREAVEEASVLNEMEEEIERQLDAKAAKTNLTATNVKNILKHVIPYEHLMTMVQKWLQDTENDVNIGPKLTRAKAKKLAAAKVSIPWPITTAQQTSSEVQALIQEELSEDSSDEEYNPEHDKQSDDDREVENIINSDIESQLLMSSNNKNLASSEQQTSPQIQYDSEGIFKIPVVPPVSMEEESIGQRTRSKFSLSETSLEEIEQAFIPPDITADMTEDWDCELDEDWDNFLKEFTQPLTQELAVEDDPEADPEYNILEDEETDLLDKEELRTDRAVEVPRKEQYDLIAELLELTPMFSTQEQEVSKKKKVLDNITPPIENSTMNCSVAHLLPVVTEPELPKLINPEQRLLLATQFQQHVQLMAQHFLLPSIPFRNGVKQNTKSTYLKSEETLIALGIEQFLPYVASIPRKFHSKKMQLIDATQLISDYLLPCRDARGMFHHINKRRASKDENPIKHYFEKGCAPKIIHYIILENKLKAPKDQPIELLPVRWQMYFQKKHRNNSVKNKDIFDSYHNFNKEDINMNAIIKSYPSIPKNHLLRNPIVNMLPKILPATSNPKASAKIDNSTTQSFKLDSSDKKISDNNTQNIEIHKKKTVYKTHTNVCSLKANTSDVKLTQTDKSSDVNNTKLNIILPRNLKISKEKESQQISLGSPQIRKTTPRLAKTRSAQNMKLMAQALGSKNSSNCTLKSKEKDIIDKNIDEHCSSSKVDNEEEIAELMLASTTIIKDPISRKKAKQTRELEIIKRLLKAENPLNEEEREAKFAASYLQKLHLTLESNNPETFKAVIKLYLDYSEKLESINRIDVNPSFSEELTNKQILQDTAMKKDILIIQLYQEICKKLQNYPEICTDFLLFLKPHQAAMIGKSIEYMMLQKMNDFVHVAQIYFAKQPSRIAKMMQAITQLSSDPHTTLENVHTVISSVFKGHPLVMDLFLQILPTAKPPESLFAPHMFENMTCPLGPYDKNMTYTENASELYENIELSTTTCQEDPYGGENCKCDCHNTDDANSKNSSEHCVSCGTRFLNGKIYLQTLEGLRPAKITFPGEDREKLENIARISLKIADKAIPSISSKKRRKSSKNESNHEDISSQREKQCTTSSPLKDNEDNEKAVTKSKRNVKFTLKTDPKKIFKRISTEDHVIPDKRMRMTQYKSKREKKTEESDVLSERNESDIVKQEKINELTETKTNNYIQLSMQDDSLNTELITKTQISPSTSNSTGCNLNNKNIEAGIMETNMQSKSNLINNKPWTRQEDMILLQSIKKEYSENSFLLISKKLENRTIHQVKERCQTLLSLLQKMM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228314;
- 90% Identity
- iTF_01228314;
- 80% Identity
- -