Pcal027523.1
Basic Information
- Insect
- Pogonomyrmex californicus
- Gene Symbol
- ZNF541
- Assembly
- GCA_017141365.1
- Location
- JAEVLP010005010.1:28010-41815[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7 8e+03 -2.0 0.2 29 42 786 799 784 800 0.88 2 2 7.7e-10 1.7e-06 29.0 0.0 2 46 952 996 951 996 0.96
Sequence Information
- Coding Sequence
- ATGCAGATTGAATCTGACTGGTTACGGCCGGGGTTTTCAACGGCGCTGCTCTCGTTTCGAGCACCCGAGTTTTCACCGCGATACGCCTCCGCCCTACGCGTCCACCCTCTCGAACTCTCCTCGTCTCCTCTCCTTTCTACGCGTATTCGTTCGTGTTCGACCAGCGAGAGACCAGCGGGGGTACGCCGCGAAAGCCTCCATCCGGCAGTCAGCCCAACTTCCCGTGACCCGAGCTTTTTGCCCGGCCGCACGGAATTATTGAAAAGTTTCGATGGCCCCTTCGAATTCGTGGATATATACATAGCCAGATTAATGCACGTCGCAGGAGGGTGGGATACACGCGGCGGGGCTGAGGGGAATGAAACTGAGGGGAAAATTCATCGAGTTATAAGCAGAGTCTCGTTCATCGTGAAACCGCGCGCTGGTTGTTGTTTCGGGCGCGCGTCCACAGTGAGAGGAGTTAGTGACCGCGTTCAGGACGCGGAGAACAAGAAAAGCGAGAAGAAAGAGGTCGTCGGACCGCCTCTGCAGACAGCATCCGTCAGTGTGAGAGCGCTTATCGAGGAAAAGATCATTCAAAAAAGAACAACAGCAGTGGATGCAAATGGCAATCAGCAGTTTCGAACGAATACCACCGTCTTCACCACGCAAGCCGACGCCGTCTCGCAAGCCATTGCTGGCAAAACGAACTTCGCGGTTCCGGCTCCACCGCCCTTGGCAGCGGGGGAAAAGGTGCGTCGGCTTTCCGATGGTGAACACTTCCGGCATCCCAATGTCACCGTGAGTGCCCATGCGATTGTGCAAAAGCAGTTGCAGGAAGCGAAAACTCAGGCTCAGGCGCAAGCGCTTGCGGATATGATTCTAAAGGGTGCGAAAGTGGCTGTAAAGAGAACAACGTCCGATCCAGGACAAAGATTACACTTGACTTACCAGCAGCCCGTGCAATCGGCGACGACCAACCAACAACCGAATAATCAACAGCCACAGGCACAACCTGCGGTAACGGAAAATTTCACAATGACTGGATACGCCGAGGATGGCGGTTACTTCAGCCCAAGCCTGCAGGACGAGGTGTTTCAGCAGGTCACAACGGTTCCTGAAAGCGTGCTCCTGCACACGTCCCAGCTGGACTCGATTCAGTTTCAGACGGCCAGTCTGTTGCAAGAACAATCCACCGAACAGTTGCAGGATATCACGCTGGAGGACCGATATTCCTCGCAGCACACGGTCAATCCGGATCTTCAAGCATTGGTGAACTCACCATTGCCAGATTCTCTAGCCGAATTCAGTACTTATGCCGCGCAATACACAGAAAGTCCTCATACATTGCCAACCCAATCGCCTCTGCCATCGCCTTTAACGCGACACGATAGTCCAAGTTTCACGTATCCTACACCACCAGCCAGTCAGGAGGGTCTACTCACCGGAAGTCTGCCGTTGCTGAGTCCTCAGGAGGATCCGGAGAGCGTGAGGCATATGTCGTCGCCGCTCTCGGCAGCGTTTTATACCACTTCGATGTCGTCCGCCGCGGCCGTGGAGGAGGCACTGAACGAGGTGCTGCCGGGTGAATCCGAGGCGGACGCGGGTCTCTACGGGTCCGGTTCGCCTAATCCGCACTCGCCACTGCCAAGCCCATTGTCGGCGACGTCGGCGCCGTCGCCACTGCCGCCGTCCTCCGTCTCGTCGCCGGGAGCAATCACCTTCACCGGCACGAGCTTCCCCGTGTCGCCGCATCACGCGCTTCAAAGCCAGATGATGCCGAACTCGGAGGATCCGCTACTCTCCTCGACCTCGAAGGACTTTGCCGTTTCTGGTCGCAGGCGATTCGAGTTCCAATCGTACAAACTAATCACGAGTCAGAATCTGATGGATCTTGGCCTCGGGAACGGTAGTCTCGCCGGCATTGTCGTCGACAACAACGGCGAGTTTAAACTAATACAGACGGCGAGTCTGCAGAAGGCAAATGTACTCGTACAGGCAGGCTCTCTCAGTCCCGCACTCACGTTCAAGAAAGAGATCCGTCTGGCAACACCAAAAAACGAGCCTGTGACCGTAAATCTCGGTCCGAACGTTCAAACGGCAAATCAGCAGCAGTGCAACGCAGAACAGTTCAATCAACAGCAAATCGTCAACCCGGCCAAGTTTTTTGTTCAAACTAATCATGCGGCAAAGAATAATATCTTGAGACAAAAATCGACTGCCGGAAATTTACCAATACCTATTGATCAGATCAAGCAGGAGATGTTAGACGAGGATGTGTTTCTCAGTCCTGGTAGTTTACCCACCAACAGTCCCGTGCGACACTGTCGGAAGAGGCCACGTATGGACGGTGACCAATATGTCAATAGTTCGCATTCTTATCCATCAAGGTTGCGAAAAGCTTGCGACCGTCATTGGGACAGTAGCTACACACCACCGCCGATCTTAGATCCGTCTCGTCCCGGTCCGGGATTATACGCGAGACTGCATCAACACGAGAGAGATTCGGACTTCAGTTCCGATGATTCTCAAGGGAACGACGGTCCACCGCCGAGAATCAACATCGGTACAAGATATCAAGCCACAATACCTCCAATGGAGCACGATGGAGACAGAGGAAACGATGGGCCAGAAGCTGACCATCTTCTGTGGGATCCTGGCATAAACCATGTGCTTACAGACACTGAACTGGAGATGTACCTGCAGTTCGCGTGTTGTGCCGCGGTGCCAGGCGGTGGTAGAAACAAGGAGTATGCGCTTCATCTGTTACACATGTGCAAAGGGAATATCCATGAAGCGATGGTGAAATTGATGCGACCAACGCCTACACTACCAATGGAGCATCCACTGCTCAGTTACGAGTGCCACGAGTCCGACAGATGGACGTCACACGAAATGGACGCGTTCTATCAGGGACTGCTCAAGTACAACAAGGACTTTTCTGCGATTTCGCGAGACGTCGGTGCCAAGTCCGCGAAACAATGCGTGCAGTTCTACTATCTTTGGAAGAGGCTCTGTCCTGATGAGTACAAGAGGCTACGTATTTGTCATGGAAAAGTGAAAATCAAGAGCGAGATTAGAGATAGTAAGGATACCAAAGAACTACGCGATGCTATCGCGTCCGTGACAGAAATGGACTTCAGTGAAGACAAATCGATCCTTCACCGTACTCTGTTACAAACAAACGAAAGAGAAAATTCAGCGACTCTGACTACCAGCGAAGGAGAGCTGAGGTTATTCGCATATGACTGCCCAGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCGCCCAAATCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGCGCCTACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGTGCCCACATGAAATCTCACAGGCCAATACCATTGCCCGATTCAACGGGTCAGGAATCTAAGCGATCCATGCAACAGTCATCAAAAACGCAACAATCAATGCTGTTGCAGCCAAGCCAACAGCAACAGCAGCAGCAACAGCAGACGGACAATGCTACACCGCAAGCTCAAGACCATCAACAACAACTGTTGCCCGCGAGTATCAGTGACAGCAACACCAAAAATACAACACATTTATGCCACAATCCGACGAGACCCCCATAG
- Protein Sequence
- MQIESDWLRPGFSTALLSFRAPEFSPRYASALRVHPLELSSSPLLSTRIRSCSTSERPAGVRRESLHPAVSPTSRDPSFLPGRTELLKSFDGPFEFVDIYIARLMHVAGGWDTRGGAEGNETEGKIHRVISRVSFIVKPRAGCCFGRASTVRGVSDRVQDAENKKSEKKEVVGPPLQTASVSVRALIEEKIIQKRTTAVDANGNQQFRTNTTVFTTQADAVSQAIAGKTNFAVPAPPPLAAGEKVRRLSDGEHFRHPNVTVSAHAIVQKQLQEAKTQAQAQALADMILKGAKVAVKRTTSDPGQRLHLTYQQPVQSATTNQQPNNQQPQAQPAVTENFTMTGYAEDGGYFSPSLQDEVFQQVTTVPESVLLHTSQLDSIQFQTASLLQEQSTEQLQDITLEDRYSSQHTVNPDLQALVNSPLPDSLAEFSTYAAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPESVRHMSSPLSAAFYTTSMSSAAAVEEALNEVLPGESEADAGLYGSGSPNPHSPLPSPLSATSAPSPLPPSSVSSPGAITFTGTSFPVSPHHALQSQMMPNSEDPLLSSTSKDFAVSGRRRFEFQSYKLITSQNLMDLGLGNGSLAGIVVDNNGEFKLIQTASLQKANVLVQAGSLSPALTFKKEIRLATPKNEPVTVNLGPNVQTANQQQCNAEQFNQQQIVNPAKFFVQTNHAAKNNILRQKSTAGNLPIPIDQIKQEMLDEDVFLSPGSLPTNSPVRHCRKRPRMDGDQYVNSSHSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQHERDSDFSSDDSQGNDGPPPRINIGTRYQATIPPMEHDGDRGNDGPEADHLLWDPGINHVLTDTELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIHEAMVKLMRPTPTLPMEHPLLSYECHESDRWTSHEMDAFYQGLLKYNKDFSAISRDVGAKSAKQCVQFYYLWKRLCPDEYKRLRICHGKVKIKSEIRDSKDTKELRDAIASVTEMDFSEDKSILHRTLLQTNERENSATLTTSEGELRLFAYDCPDSFSGSVTVTMAGSTQTAQIGNTGHATVNTNSQTHTSSEQQLPAPTPLHYPCKICGKVFNKVKSRSAHMKSHRPIPLPDSTGQESKRSMQQSSKTQQSMLLQPSQQQQQQQQQTDNATPQAQDHQQQLLPASISDSNTKNTTHLCHNPTRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01122371;
- 90% Identity
- iTF_01407212;
- 80% Identity
- -