Pcal016887.1
Basic Information
- Insect
- Pogonomyrmex californicus
- Gene Symbol
- Ada2b
- Assembly
- GCA_017141365.1
- Location
- JAEVLP010006589.1:30226-34757[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-13 2.4e-10 41.3 0.4 1 37 66 103 66 108 0.96 2 2 0.8 1.7e+03 0.1 0.0 4 14 265 275 265 279 0.83
Sequence Information
- Coding Sequence
- ATGGCGGATCTATACGCGAATTACAACTGCACGTATTGTCAGGAGGACATCGCGGGTCTACGCGTCAAGTGTAACGAATGCCCTGACTTCGACCTTTGCCTGCAGTGTTTTTCCGCTGGCGCTGAAATCGGACAACATAAAAATAATCACGCTTATAAGTTTATGGATTCTGGTACCATTAACATATTCAATGGTCGTGGCAATTGGACTGCCAGAGAACAGTTGAGACTTCTGGATGCAATCGAACAATATGGATTTGGGAATTGGGAAGACATCAGCAAACATATCGAGAAGCGTACACCAGAAGAAGCGAAAGAAGAATATATTGCTAGATATCTTAACGGTAACATCGGAAAGCATACATGGCCACCCACGGATAGTTACGTACCAAATCTTACGGATCAAACGAAATCTGATCATGGTCCTTTGTCGCCTGATCTCACATCCAGATTACCGCCATTGGACATTACCCCGGAAGAAGCTGCGCAATTAGGTTATATGCCTCAACGAGATGATTTTGAGAGGGATTACAACCATGAAGCCGAATCTCTCGTTTCTTCGTTATCTTTGAACCCTGCTGAGGACGATGATCTTGATATCGCTCTTAAATTAGCGCAAGTTGATATGTATACCAGTAATCTTAGAGAACGAGCTAGACGAAAACGCGTCGTGAGAGATTATCAACTTGTATCTGCCTTCTTCTCATCATCCAGGAAAGACAAAGGAATAAAGAAAAAACAAACGAAAGAAGAAAAAGAATTTAGGGACAGAATGCGTGTATTCGCACAGTTTTACACAGCACAAGAGCACGAACAGTTCCTAACAAACCTCGAGAGAGAAAGAGAGTTGCGCTTACGGCTCTCGGAGCTTTATCGATATCGCGAGAATGGCATCACGAGACATGAAGAATGCGCTCATTTCGAGCAGGTTCTTGCGCAAACTCAAAGACAGAATGATACAGCGGATCATTGGAATGAAAAAAAATCTGGCAGCAGTGGGCCGTCCACACCAATACACCGCAGCACCTCAAAAAGAAGAGAAGAAGAAAAAAATTACTCTTCCACCGACCGAAAATACACTGCAAAGCAAGACTTGCCCAGCTCCACAACCAATCAAATCAGTCACAATCGGACGACGACTCTAACCAATCAATGGGCGGAGTCGGATAGCAACCCAAATACTTCCAATCAATCGACTTCCAGCCCCAGTTCCTCACAAGAAAAGAGTTACAGCAATGCTACTTCTACTCAAGAACGAGATATAGAATTGGAGGCTGCGTCTCATCTTTTAACGAAGCAAGAAAAATCCTTGTGTATTCAACTTGATCTAAAGCCGACTCAGTATTTGACGCAAAAGACATTGTTATTACAAGAATATTTAAACGGTAATAGGAGATCGAGTATTGTACCTCAATCAGAACCAGAAAGCAAAATTCTTCATTATCTAGTAACTAACGGTTGGATTACAGCCAGTTGA
- Protein Sequence
- MADLYANYNCTYCQEDIAGLRVKCNECPDFDLCLQCFSAGAEIGQHKNNHAYKFMDSGTINIFNGRGNWTAREQLRLLDAIEQYGFGNWEDISKHIEKRTPEEAKEEYIARYLNGNIGKHTWPPTDSYVPNLTDQTKSDHGPLSPDLTSRLPPLDITPEEAAQLGYMPQRDDFERDYNHEAESLVSSLSLNPAEDDDLDIALKLAQVDMYTSNLRERARRKRVVRDYQLVSAFFSSSRKDKGIKKKQTKEEKEFRDRMRVFAQFYTAQEHEQFLTNLERERELRLRLSELYRYRENGITRHEECAHFEQVLAQTQRQNDTADHWNEKKSGSSGPSTPIHRSTSKRREEEKNYSSTDRKYTAKQDLPSSTTNQISHNRTTTLTNQWAESDSNPNTSNQSTSSPSSSQEKSYSNATSTQERDIELEAASHLLTKQEKSLCIQLDLKPTQYLTQKTLLLQEYLNGNRRSSIVPQSEPESKILHYLVTNGWITAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00765507;
- 90% Identity
- iTF_01408128;
- 80% Identity
- iTF_01228952;