Basic Information

Insect: Pogonomyrmex californicus
Gene Symbol: Ncor2
Assembly: GCA_017141365.1
Location: JAEVLP010004691.1:29666-38799[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.6e-17 1e-13 52.1 0.6 3 45 165 207 163 208 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.6e-17	1e-13	52.1	0.6	3	45	165	207	163	208	0.95

Sequence Information

Coding Sequence: ATGGCGGTGGCGCATCGCATCGCATATGCACCATCTGATACAGGCGCATCGTCGCCTGAGGGTGGCAGACAAATAGGACCTCACGCCTGCACGGTATGTCAAAGTGTCGTCGAGGGAAGCGCGCACAGTCGCGCGTTACCACGTAGCCAGGCATGGCAGTATGGTCTGCGAGAGGATCAGGTATCAGCTGGTGCTCGCGTCTGCAACACCTGCCGATGCAAGGCCGTCCGAGGACGTTACACTGCCTGCCCACTGCCCGGCTGTCCGAATTTGAGCAGTTCGAAGTCGAGGGTGAAGCGATTGAGGGCATTGCCCTCCAAGTGGCTTGACTTGCCGCCGGAAATCCGGGAGCCAATCGCTCAAGAATTTCAGATACCAAACAGCGCGACGAAATGCTGCTCGGCCTGCTTTAGTCGCATATCGCGTCGTTTGGCTCCACATCTCGCCAGTGGTACCGAGGTATCCGAAGATGGTGCCGACGCGTTGTCACGCCAGTGGACGGATGAGGAACTTGAACAACTTCGTAGAGCGCTTCGGGAACACGGTACCAATTGGTCGAAGATCGCCGAGCAGATACCCAGCAAGACGAATCATCAATGCAAAAATTATTATTTTGCTTATCGGGAAAAGCTGAGTCTCGATCAAGTGGTGGCTGAATACTATGCTTCATTGGGAGAAGAACGAAGACCATGTCTTACTGATGAAGAGGAGAGTGGTAGCAGTACCAGTAGCTGCGATGAACTATTAGCTGTTCATGATTCGAGTGACACGGCTAGCGCAAGCAGTCCGGCCACGAATATGACGGGTAATAACGTAGCGTCAGGCACTGCGACATCATCGTCATTACCGATGTCTTTCCAACGATCTACTGAACAGAAACTTGGTGAGAAACTCTCGGATATAGCCGTTGTGGTATCCCTCGTACCACCTGGATCATCACATCAGTCTTCCAACAGTGGAACTACTACCACTGCATCCGGTGGTACTAGAGAGGAATATGATGACAGCTCTGCCACGGAGACAGCGGACGAAGGTCAGGGAGGTGCTGACATAGACAATGGCAGTATTGTGGTGACTCTGTCAACCCCCAACAATAACACAATGTCGTTGCAGCAACAGAGTCAACAGCAGAACCAACTTCCGCAGCCACCATCAATTGTTCATTCTCCACCTTCGACAACAAGTAATTCCAACCCGCTAACTGTCAAAGATCTCATGAGTGGTGTCATCGAGATGCAACTGAAACGTACTACACTAAACAGTCCAGCTGACAGTGGTTCATCAACATCTGACAATTCAGGCTTGATGACAATAACTAGTATCTTGAAGACAGATCATCGCAACGACATAACATATGTTCGTAACTACAAATCATCGTCGAATATGGCGAATATGGTGCTGTCTAATCCAAATTTAGCAACGCTCTCTGTTGTCTCGGGCCCTCATCATGCTCATCGCTCTGCTCCCAGTCCACAACAAATTGGCCAAATGCAGGCTACTATTACACCTTGTCCGCCGACTGTACCCAGCAGTCAGGCATCATCGGACTTGCCTAAAGAAGGTTTGGTCGTCATGCAAGTGCAACAGGCGCTTCGAGAAACAGAAGGAACGTTGGATTTGAGTATCAAAAAACCGAGAATACAACAAGATTATAATCATTCGCTACAGATTCACAAACCGCCGACGGTCACGCTCTATCGACCAGAACCGCCACCGGGCGCGTATTATCATCCTCACGCGCCTCATCCGGATCAAGGACGCGGTGCAAAGAGTCCGTTGATTTACAGTTCGTCACAACGACCGCAAGCACCTATTACACCTAAAATGAACAAAGTTAACGTACCACCACCTCATCCCAAGTTGTCTCCAAAATTGAGCAACATGGGCACACCGAGTCATAAAAGTGGTTCCATCACGCATGGTACGCCTGTGTCTACAGCGCGTTATGAGGGTCTGTTACAACAAATGACGCCGCCCGGTAATCCGGTTACTGGTGCCGCCCCGAACGCTAGCGAACGAGGCGGTGGTAGCTCCGTCAATGCCGGCTCCACTGTTCCAGGAGCGCCGAAGGATACAGGTGGTTCGATCACTCAAGGTACGCCGGTACTTCCGTTCGCAGTGGATAAACGCGGCACGCCCATGTATGATTATCATCGTAATATTCGACACTCGCCTGTTACGGGTGGAAGTAGCGTTCCACCACCACCTCCAGGACAGGGTCCCACAAGTCAAGCATCCCCGGTGGTGGTGAGTCACGGTGGCAGTCAGTATAATTCTTATTCCACTGCCGGGCGACCGCCACCTAGTTACTCGATGGAACAACAATTATCCAGTCGACAAATTATTATGAACGATTACATCACCAGTCAACAAATGCATGCACGCGCTCGTGGTAGCAATAGCAGTGGTGCATCCGCTGCTGGTGAGACAGCCGGTAAGAACGAACCGCCACCGCCACCGTCGTCTACCCTTTACTATGCCAGTACACCTCCTCCATCGCAGACACATACGCAACCGCGGCAAGGTGTCATCCAGAGGCATAATCCGCAAAAGCAGATGCATTACCCACCACCGCCACCTGGTCTGGAGGCATTCTCTAGTTTAGTGGATGTAGCAGTACAACAACCCAGTCTTCCGGTGCCACATCCACACAGTCATCCAACTGCATCCAGTAGCGGTGGTCACGAGGGTCTCGGCAAGACGATGGCGGATCGCTTGTTGGCCGATCGTTATGACAATAACCGAGCGTTCCGCGAACAAGAAATACGCATGCAGGAACATCGTATGGCTGCAATGCAGGCGGAACATAGATTGGCAGTGGCCGCTGCGGCGGCACAACATCAACGTGACCGAGATAGAGAGCGTGATCTTATTCATCTTCGGGAGAAAGAAGAACATCGTTTGCATCGCGAAAAGGAATTGCAACAGTTGGAGCACCGCCTTGCGGTACAACAGCAGCATCATCAACAACGTGAAAAAGATCTCCAGCAGCAAGAACATCGGCTCGCGCAGCAACGGGAGGATATGCATGTCGAGCATTCTGGTCTGTCCGTGCAACAAGTTCGAGAAAAGGATATCCAACATGAGCATCGGTTTAATGTACATCAACGAGATCGAGAGAAGGAGATACATCAGCAAATATTGGTTGCCGCTACTCAACGCGAGAAGGAGCACGAACATCGACTGGCTTCCTCCAGGCTTCAGCAGTCTCAGCAATCTCAGCAGCAGCAACAACAGTCGTCAACGTCGTCATCGTCTTCGTCACGACAGAATCAATCCTCCAGTCAACAGAATGACTCGTCAACTCTAACAGCCGCCAGTCTGATTGACGCTATCATTACGCATCAGATTAATCAGAGTGTTGAGAATGCCAGTGGAAGCGGATCCTCGGCCAATCAGCCAGTACGTGCTGGCGATCGCCTATTTCAGGGATTTCATCGCGAAACTTCGCAAGAACCTAATGGCATAGCCCACAGTCCCGCCGGTGAAGGCAGCGGTGGTGGAAACAGCGGAAACAGCGGAAGTGGCAATGGAAGTGGTAGCAAAGCGATCACTCTCGGCGAACATGTCGATCATATTGTCTCTAAAGATTATGGCCCGCCTCATTCATCGTATAGATCTTACACCGGATATCAAATATCTGACGATCAATGGAAGAGACGAAAAATTAACGAATCTGATTCGGTGAAGACCGGGGATGAGCGTCAGATAATACGCCCGGTTTCACCGCCGGAGGCAACTACCAATCATTACGGACGTCGCTTCTACGAATCGAGCACTGCCACATCCACTTCCGGAACTCCCTCCAACAAGCCGCATCAGATATCGCCATTCGATTATGTGAAGAACAAGATCGTTGAAGTGATGCGCACCGAGGACGACAAAGCTGGCGGCGGTAGCGGCAGCGGCGGCGGCGGCGACGGTGGTGCGAGTTCTGACAGGAATGGAGGCGGTAACTCCGTTGTCGTGTCCGAGAAGGATGAAAAGGGAGCCACTACCACCACGTTCTATCCATTTAGCGCGCTCGGGGTACACACGGGACCGCCACCCGCCCCACCACCCGCCACAGGTACATCCGCCTCCGTGACGAAATCGGAGCAGATGCAGGCCGAGCCGGCGCCGTTGCTCTCCTCGCAGTACGAGCCGCTATCAGATGAGGATTGA
Protein Sequence: MAVAHRIAYAPSDTGASSPEGGRQIGPHACTVCQSVVEGSAHSRALPRSQAWQYGLREDQVSAGARVCNTCRCKAVRGRYTACPLPGCPNLSSSKSRVKRLRALPSKWLDLPPEIREPIAQEFQIPNSATKCCSACFSRISRRLAPHLASGTEVSEDGADALSRQWTDEELEQLRRALREHGTNWSKIAEQIPSKTNHQCKNYYFAYREKLSLDQVVAEYYASLGEERRPCLTDEEESGSSTSSCDELLAVHDSSDTASASSPATNMTGNNVASGTATSSSLPMSFQRSTEQKLGEKLSDIAVVVSLVPPGSSHQSSNSGTTTTASGGTREEYDDSSATETADEGQGGADIDNGSIVVTLSTPNNNTMSLQQQSQQQNQLPQPPSIVHSPPSTTSNSNPLTVKDLMSGVIEMQLKRTTLNSPADSGSSTSDNSGLMTITSILKTDHRNDITYVRNYKSSSNMANMVLSNPNLATLSVVSGPHHAHRSAPSPQQIGQMQATITPCPPTVPSSQASSDLPKEGLVVMQVQQALRETEGTLDLSIKKPRIQQDYNHSLQIHKPPTVTLYRPEPPPGAYYHPHAPHPDQGRGAKSPLIYSSSQRPQAPITPKMNKVNVPPPHPKLSPKLSNMGTPSHKSGSITHGTPVSTARYEGLLQQMTPPGNPVTGAAPNASERGGGSSVNAGSTVPGAPKDTGGSITQGTPVLPFAVDKRGTPMYDYHRNIRHSPVTGGSSVPPPPPGQGPTSQASPVVVSHGGSQYNSYSTAGRPPPSYSMEQQLSSRQIIMNDYITSQQMHARARGSNSSGASAAGETAGKNEPPPPPSSTLYYASTPPPSQTHTQPRQGVIQRHNPQKQMHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPHSHPTASSSGGHEGLGKTMADRLLADRYDNNRAFREQEIRMQEHRMAAMQAEHRLAVAAAAAQHQRDRDRERDLIHLREKEEHRLHREKELQQLEHRLAVQQQHHQQREKDLQQQEHRLAQQREDMHVEHSGLSVQQVREKDIQHEHRFNVHQRDREKEIHQQILVAATQREKEHEHRLASSRLQQSQQSQQQQQQSSTSSSSSSRQNQSSSQQNDSSTLTAASLIDAIITHQINQSVENASGSGSSANQPVRAGDRLFQGFHRETSQEPNGIAHSPAGEGSGGGNSGNSGSGNGSGSKAITLGEHVDHIVSKDYGPPHSSYRSYTGYQISDDQWKRRKINESDSVKTGDERQIIRPVSPPEATTNHYGRRFYESSTATSTSGTPSNKPHQISPFDYVKNKIVEVMRTEDDKAGGGSGSGGGGDGGASSDRNGGGNSVVVSEKDEKGATTTTFYPFSALGVHTGPPPAPPPATGTSASVTKSEQMQAEPAPLLSSQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -