Pcal004310.1
Basic Information
- Insect
- Pogonomyrmex californicus
- Gene Symbol
- Cdc5l
- Assembly
- GCA_017141365.1
- Location
- JAEVLP010000001.1:17818-21734[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-10 7.9e-07 30.0 1.7 18 46 2 31 1 31 0.95 2 2 3.7e-12 7.9e-09 36.4 0.1 1 45 37 80 37 81 0.93
Sequence Information
- Coding Sequence
- ATGAAATATGGAAAAAATCAATGGAGCCGTATTGCATCTTTGTTACATCGAAAATCTGCCAAGCAGTGCAAGGCGCGTTGGTTTGAATGGTTAGATCCAAGCATAAAGAAGACCGAATGGAGCCGGGAAGAGGATGAAAAGTTGCTTCACCTTGCAAAGTTAATGCCCACCCAGTGGCGAACTATCGCACCTATTATTGGTAGAACAGCTGCGCAGTGTTTGGAAAGATATGAATATTTGCTTGATCAAGCGCAAAAGAAAGAGGAAGGAGATGATGCTGTTGATGATCCTCGCAAGCTTAAACCTGGTGAAATTGATCCTAATCCAGAAACAAAGCCAGCAAGGCCAGATCCTAAAGATATGGATGAAGATGAATTGGAAATGTTATCAGAGGCACGTGCTAGGTTGGCAAATACGCAGGGAAAAAAGGCAAAACGTAAAGCGCGTGAAAAACAGTTGGAGGAGGCACGTAGGCTCGCTGCTTTACAAAAGCGTAGAGAATTAAGAGCTGCTGGTATTACTGTGTCCCAAAAGAACAAACGCAAACGTGGTGTTAATTATAATACAGAAATACCGTTTGAGAAACGACCTGCGTCTGGTTTTTATGACACCTCCAATGAGCATGTTGATCCCCTAGCGATCGATTTTTCCCGAATGAGACAGCAGCATCTAGATGGTGAACTTCGACAAGAAAAGGAAGAAATGGAGCGCAGGAAAGATAAACAGAAATTAAAACAACGTAAAGAAAATGATATTCCTATGGGTATGCTTAACAATGAAGAACCTGTAAAGAAAAGAAGTAAGTTGGTCCTACCAGAGCCTCAGATCTCTGATCAAGAATTACAGCAAGTTGTGAAACTTGGCAGAGCTTCGGAGGTGGCTCGAGAAGTTGCTACTGAGAGCGGTGTTACACTCTCCGATAGTTTATTAGCTGATTATTCCTTACCTACGAATGCATCCGCAACGCCTCGTACACCAGCTGCTACGGATAGAATATTACAAGAAGCACAAAATGTCATGGCTCTTACACACGTAGATACACCACTGAAAGGTGGCTTGAATACTCCATTGAACAATCCTGATTTTACTGGCGTTGCACCTCCTACCAATGTTGTTGCTACGCCCAATACAATTTTAGCTACTCCATTTAGGTCGCAACGTAGCGATGGAACGCCGATGAATTCATTTAACACACCAGGCGGGGCATCAGTACGAACGCAAAATGGACTTTTAGCGGCAACGCCGGTTCGCGATAAACTTAATATAAATCCAGATGAAAGCATGGATGGCTCGGAAACTCCATTGATGCAGACGCAGGCAAAGAGCTCATTGCGCGCAGTATTGAGTTCCTTACCGGCGCCGTGTAACGATTATGAAATAGATATCTATGACGGGGAGATAAACGAGGAAGGTGCTGGTGCGCCTGTAACTGAGATGGTGGAGGATCAGGCGGATATCGATGCAAGACAGCAACAGGAATTACTAGAAGAAAAAAAAAGAGAATTGGCACGTAGATCGCAAGTAATACAAAGAGATTTACCACGACCTGCGGATATAAATATGAATATTTTAAGACCATATATGGACACGCCATTGACTGATTTGCAAAGGGCAGAAGAATTGATAAAGAGAGAAATGATCACAATGTTGCATTACGATGCACTGCAAAATCCAACACAGTCAAATCGAAAAAGTGCTGCAACATCGTTAGCTCAAGCTCAAACTTATTTAGAGCAACATCCATATAATATTTTTGAAGAGGATGAACTTATTAATGCTAAGAAAATGTTAACGGATGAGATGGCAGTTGTAAAGGAAGGAATGGCGCATGGAGAATTGAGCTTGGATGCCTATACTACTGTATGGGAGGAATGTCTGTCGCAGATTTTGTACCTCGAAACGCAAAAACGATATACCCGTGCGACTCTAGCCTCGAAAAAAGACAGAGTGGAAGCATGCGAGAGAAAATTAGAGGAAAATCGTATGCACATGACGGGGGAAGCTAAACGTGCTGCCAGAATGGAAAAGAAATTAAAAGTACTCACCGGAGGTTATCAAACTAGGACGCAGGTGCTGACGAAGCAGCTACATGATTTGTGGGAACAGATAGAGCAATCGCATCTCGAACTATCGACATTTAAGTTTTTGCAAACGCAGGAAGAGGCAGCGGTGCCGAGGAGGATAAACGCGCTTATGGAAGACGTGAATAGGCAGACAGAACGAGAACGCTCGTTGCAAATGCGATATGCTCAGCTGCAAGACCAGTTGCAGCAGTGTCGATTAAACGAGATGTCATCTTAG
- Protein Sequence
- MKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGDDAVDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGITVSQKNKRKRGVNYNTEIPFEKRPASGFYDTSNEHVDPLAIDFSRMRQQHLDGELRQEKEEMERRKDKQKLKQRKENDIPMGMLNNEEPVKKRSKLVLPEPQISDQELQQVVKLGRASEVAREVATESGVTLSDSLLADYSLPTNASATPRTPAATDRILQEAQNVMALTHVDTPLKGGLNTPLNNPDFTGVAPPTNVVATPNTILATPFRSQRSDGTPMNSFNTPGGASVRTQNGLLAATPVRDKLNINPDESMDGSETPLMQTQAKSSLRAVLSSLPAPCNDYEIDIYDGEINEEGAGAPVTEMVEDQADIDARQQQELLEEKKRELARRSQVIQRDLPRPADINMNILRPYMDTPLTDLQRAEELIKREMITMLHYDALQNPTQSNRKSAATSLAQAQTYLEQHPYNIFEEDELINAKKMLTDEMAVVKEGMAHGELSLDAYTTVWEECLSQILYLETQKRYTRATLASKKDRVEACERKLEENRMHMTGEAKRAARMEKKLKVLTGGYQTRTQVLTKQLHDLWEQIEQSHLELSTFKFLQTQEEAAVPRRINALMEDVNRQTERERSLQMRYAQLQDQLQQCRLNEMSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01055917;
- 90% Identity
- iTF_00452511;
- 80% Identity
- -