Basic Information

Insect: Pogonomyrmex californicus
Gene Symbol: -
Assembly: GCA_017141365.1
Location: JAEVLP010000761.1:3175-5979[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 1.9 4.2e+03 -1.1 0.0 3 17 163 177 161 178 0.89

2 6 0.0035 7.6 7.6 0.0 19 46 218 250 211 250 0.81

3 6 3.6e-12 7.7e-09 36.4 0.3 1 45 256 302 256 303 0.95

4 6 1.3e-08 2.9e-05 25.0 0.5 3 43 311 355 309 358 0.95

5 6 2.4e-08 5.1e-05 24.2 0.0 1 42 364 406 364 410 0.93

6 6 1.3e-11 2.7e-08 34.7 0.2 4 43 419 458 418 461 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	1.9	4.2e+03	-1.1	0.0	3	17	163	177	161	178	0.89
2	6	0.0035	7.6	7.6	0.0	19	46	218	250	211	250	0.81
3	6	3.6e-12	7.7e-09	36.4	0.3	1	45	256	302	256	303	0.95
4	6	1.3e-08	2.9e-05	25.0	0.5	3	43	311	355	309	358	0.95
5	6	2.4e-08	5.1e-05	24.2	0.0	1	42	364	406	364	410	0.93
6	6	1.3e-11	2.7e-08	34.7	0.2	4	43	419	458	418	461	0.96

Sequence Information

Coding Sequence: ATGAGCGAATCTGACGACTCCGATATTCTGGCAGATATTAAGGCTCTAGATGAAGCATTAGCTTTGTCCGTGAAAAATAAATCTCAAGAACATATTAGCAACAGTCGTCCACAATCCAGCAATGTCTCGTCAATAGGTCTTGATTTTGATGATGACAACGATAACTATATCAACTATCTTGAAACGAATCGAGTTATTGACAAATCTCTAAATGCTTATGAGATTAACACCAGATTGATCACAGGCTTGACGATAGCCAAGAAAAAGTTGTCTGCTCTACTAGAAGAGTGTGAGCAGAAAATAAAGCTATTAGATGAGAAGATGATGAAGTCTATGGAACGGAACTTAAGTTCCAAATTGACAATAAGTAATGCTGGCATGCCATATTTTAAAGATAAGAATTACTTCAGTGCTCCCAAGAACTATGATACTTTGATGAAGGAAGCACGCGGCGAATTGTTCGTTGTATCTCTGAAAAAGCCAAGTCGTTGGTCAAGTAAAGATAGATTGATACTTTTAAACGCGATAAAGGATGAAACATATGCGTCGACAATGCCTGACGAATCCAGCCAAAAAGTCGAGGAATCTACATCTGACGGTACAATTAAAAAATTGATGCTTCCTTTAGATTTTAACAAAATGGTAGGTGCGTTGGGTGAAAGAGAGTTTGATTGGTATAAGATTTCCGCTATGGATTTTGGTAATAGACATTCGCCGAACGAATGCCGAGCAATGTGGAACGTTTATCTGCATCCTACTTTTAGAAAAACTGAATGGACAAGCACAGAGGATAAAAAACTACTAAGGTACGCGAAAGAATACAAATATCAAGATTGGGACACTATAACGCAGAAATTAGGGACAAATCGTAGCGCCTATCAATGTTTCATTAGGTTTAACACTATTAAGAAAGTGCCATCGGCTGGGCGTTCTTGGACCAAGCAGGAGGACAGACATCTCCTGAAAATTATAAACGGAGTTAAGATTGGAGATTACATTCCTTGGACCGAAGTAGCCAATCATATGCGGCACAGAACTAAACAGCAGATTTACACGCGGTGGATGTACAGGATGGCGCCTCATTTGAGGAAAGGTAGATTCACTTATTTGGAAACGTCGGCTCTTCTGGAAGCCGTACAGAAATACGGCACAAATTTCGTTAAAATTTCAAACACTGTAATGCCAAATCGAAGTTCGATACAACTCCACCAACACTACGACACGATAATGGAAAACAAAAGTGGTTTTAATTTTTGGACCATCAACGATGATATGATGTTAATTAATCTGCATAAGAAGCACAGCAATAATTGGTCTAAAATAGCTACGTATTTTCGCAACAAATCAAGAACGCAAGTGAGACATCGATATACTGCATTATTAAAATACATAATGAAAGGTATCAGTATTCAAAATATACCTAGACCACCTATAATTAACCATCCAAATTCTTTAGCAACCTTTAAAAAACAATCCGATAATGCATCAAAGAATACTAATAAAATTGAATCAGAGAAAAAGCTCAAGCATCGCGTTATAGGTAAATATGATATTCAATTAAGACTGTATGAAACTCTTTGTTTTCCACCTACGATGAAACGTAATGATCCTCACGAAAAACTTTACAACTTTGAAGAGCTTTTGCATGAGACCAAAAAATTATACAATGTATTGAATGTGTTAAAAGCCAATCTCGATATTCCTGGCGATTTTCTGAATTACATACAGTTGAATAATAGAGAGAAACAACTTTTAGTTTCTCTAAAAGAATACATAAACGTGAAGAAAAACAAAATACAGGATAATGAATTCATAGAAAAGTTTAGAACGCGTATGTTTGGTTACTCCTCGGAAGATAGTGAAAGTGAGTACTTTATACCACCACTTCCGTTCGATGGATATGTAAGGACAAAAAGAACGATCAACCAAAAGAACAAATCTATAGATTGTGATTTACATGTTAATGAAAAATTCCTCGTTGATATACCTGCATATTTCCCTGAAATTCCCGGTGTGTCTCTTCTCGTTAGTAGTGAAGAGAATATTCAGTTTCACAAACTCGGTCAGTTCTTAATAAGCGATTATCATAATTACAATCAACAAAATATAGATTTGTATAATTCAATAAAATGCACGTTGTCTTTTGATAAAGGGAGTAATGCAAACAAAACTTCATCAGGATATAACGAAGTGAGTGCAAATTCAAAAATAAAAAATATCATAGAAGATTACGAACACGCGAGTCGATCAAAGGAGACTATCTCTATTTTTGAAGAGTATAAGGAAATGGATATAACGAAGAATATAATTCTGCCAAATCAAGCAACTTTGTTAGGTTTGAAGAATTTGTTCCTTTGGAAATTACTGTATGAACATCAAAATAAATCTGATCATTATGAAACGTTGGCGCCAAGTGAAAAAAAGCGAAAACGAACGACGACAGACCATCAACAACCTATACAAACAGAAAATGCTGAATATCAGCTGCTGCGAACACGTTTGTTGCAATTATTTAAACTTCCCATAGGTTTGTCGAACACTCTGTTACAAATAAGCGGACCAGAAGCAATATTTTTGAAAGAGGAAGCAAACAATCAAAACACTACGTTAATTCCTTGCAGTGTGATCTCACGGAAAACAAAATCTCAAGATATGCCTATGCAACTATATAAAAAAGTATGTTTAAGTAGCTTGAACGTTCCTGTTGATAACAATTTTCGGATATCGGATGATAAAGCGGAAAATCACCCTGTAATACGTAGCTGCAAAGTAATTCATAAAAAGTATAAAGTTGTTCCACAATAA
Protein Sequence: MSESDDSDILADIKALDEALALSVKNKSQEHISNSRPQSSNVSSIGLDFDDDNDNYINYLETNRVIDKSLNAYEINTRLITGLTIAKKKLSALLEECEQKIKLLDEKMMKSMERNLSSKLTISNAGMPYFKDKNYFSAPKNYDTLMKEARGELFVVSLKKPSRWSSKDRLILLNAIKDETYASTMPDESSQKVEESTSDGTIKKLMLPLDFNKMVGALGEREFDWYKISAMDFGNRHSPNECRAMWNVYLHPTFRKTEWTSTEDKKLLRYAKEYKYQDWDTITQKLGTNRSAYQCFIRFNTIKKVPSAGRSWTKQEDRHLLKIINGVKIGDYIPWTEVANHMRHRTKQQIYTRWMYRMAPHLRKGRFTYLETSALLEAVQKYGTNFVKISNTVMPNRSSIQLHQHYDTIMENKSGFNFWTINDDMMLINLHKKHSNNWSKIATYFRNKSRTQVRHRYTALLKYIMKGISIQNIPRPPIINHPNSLATFKKQSDNASKNTNKIESEKKLKHRVIGKYDIQLRLYETLCFPPTMKRNDPHEKLYNFEELLHETKKLYNVLNVLKANLDIPGDFLNYIQLNNREKQLLVSLKEYINVKKNKIQDNEFIEKFRTRMFGYSSEDSESEYFIPPLPFDGYVRTKRTINQKNKSIDCDLHVNEKFLVDIPAYFPEIPGVSLLVSSEENIQFHKLGQFLISDYHNYNQQNIDLYNSIKCTLSFDKGSNANKTSSGYNEVSANSKIKNIIEDYEHASRSKETISIFEEYKEMDITKNIILPNQATLLGLKNLFLWKLLYEHQNKSDHYETLAPSEKKRKRTTTDHQQPIQTENAEYQLLRTRLLQLFKLPIGLSNTLLQISGPEAIFLKEEANNQNTTLIPCSVISRKTKSQDMPMQLYKKVCLSSLNVPVDNNFRISDDKAENHPVIRSCKVIHKKYKVVPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01228302;
90% Identity: iTF_01228302;
80% Identity: -