Pcal007712.1
Basic Information
- Insect
- Pogonomyrmex californicus
- Gene Symbol
- kn
- Assembly
- GCA_017141365.1
- Location
- JAEVLP010000022.1:945905-958614[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-39 1.6e-35 123.4 0.1 42 116 23 97 16 115 0.94
Sequence Information
- Coding Sequence
- ATGAGACAGATACTGAAGGAGGAACCTGTACCACGTGCTTGGCCGCAGCCCACGCTCACCGACAACGGAACGGTTGGCGTGGGCCGGGCACATTTTGAGAAACAACCACCAAGTAATTTAAGGAAGAGCAATTTTTTCCATTTCGTAATCGCCCTTTATGACCGACACGGCCAACCGATCGAGATTGAGAGGACGTCGTTCGTGGGCTTTGTCGAGAAAGATCAGGAGTCTGAGGGCCAAAAGACGAATAATGGTATTCAGTACAATCTACATCTACTCTATTCTAATGAGACATATTTTACGTCGCTGGTTCAGGCATGGCAAAAAGGGTCCAGCTTCCGTCTTAAAGAAGCACACGAATATACGCGCACGGACAAGGCGCAAAGGGAGATGAGAAACGGCGGGGAAAGAGAAACAGAAGAAGCGAACATTTTGAAGGTGGTCCGACCAGCAGACCCCCAAAAAACATACTCGCATTATGAACGCATTAAAAAGCCGCAAGGCGCTATACGCAAGCTCCCGACCAAATAG
- Protein Sequence
- MRQILKEEPVPRAWPQPTLTDNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFVGFVEKDQESEGQKTNNGIQYNLHLLYSNETYFTSLVQAWQKGSSFRLKEAHEYTRTDKAQREMRNGGERETEEANILKVVRPADPQKTYSHYERIKKPQGAIRKLPTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -