Pcal005281.1
Basic Information
- Insect
- Pogonomyrmex californicus
- Gene Symbol
- Arid4b
- Assembly
- GCA_017141365.1
- Location
- JAEVLP010004919.1:1307-8509[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-27 2.5e-23 83.2 0.1 1 89 308 395 308 395 0.94 2 2 0.052 2e+02 3.4 0.1 21 66 1381 1426 1360 1444 0.65
Sequence Information
- Coding Sequence
- ATGCTGGGAGACGATCCACCGTCCCTATCGGTGGGTACAGAAGTTAGCGCTAAGTATAAGGGTGCCTTCTGTGAAGCAAAAATTCGTAAAGTAGTACGATCGGTAAAATGTCGTGTAACTTATAAACCGCAAGGTTTAGGGACTGCTACAGTTGCTGATGATCAAATAAGAGGGACTTTAAGAGTAGGTGCTTCTGTTGAAGTTAAACATGTAGATCGAAAAGAACTTGTTGAAGCTACAATTACAAAAATCCAAGACTGCAGCCAATATACTGTGGTTTTTGATGATGGAGATATCACGACATTAAGAAGAACTGCACTTTGCCTGAAGAGTGGGAGGCATTTTGCCGAAAGTGAAACATTGGATCAACTTCCATTGACTCACCCAGAACATTTTGGGAATCCTGTAATTGGGGGTAGGAGAGGTAGACGATCAAGGCAAGCACAGGATGAAAGCAGCGAAGATGAAGACAGTCCGCCACGAGGCGCTCGTGATTCGGCTTCTAGCGGGGGTGCAAAAGAAGGAATGGAAACTGAACCAGAAATTGGTAGAGTGGTTTGTGTGGAACTCGGTGATAAAAAGAAAAAGGATAATTGGTTTCCAGGGCTAGTAGTTGCACCTACTGCTCAAGATACAGTAAGAATACGAGTGAGAGATGATTACTTAGTACGATCATTCAAAGATGCCAGATATTATACAGTACCCAAGAAAGAAGCTACAGAATTCACAAAGGAATTAGTTAATAAAGTTGAAAACAGTACTCTGAAAGTTGCAGTAGAAAAAGCGCTTTTATTTTTAGAGAAAAATGAATTGCCACCTCATTGGGATAGGGATTCCTTGTTTGGTCATTCTGTTTCTAGTGGAAATAGCGATTATGATGGAGAACTTGACTCAGATAGTTCGGATGATGAACCGCGTGAGGAAAAAGATCATTTTGTGGCTCAATTATATAAATTCATGGATGATCGCGGAACACCTATAAATGTTTGTCCTATGATTGGATCCGAAGATATAGATTTGTATCGACTTTTCCGAGCGGTTTATAAATTGGGTGGCTACAATCGTGTTACGAATCAAAATCAATGGAAAGCTGTGACACGACGACTTGGTTTTACGATGCAAAATTCGGTACCCTTGTATAATCTTGTAAAACAAGCTTATAAAAAGGTTTTACACTCCTTTGAGGATTTTTACAGAAAATTAGGCTGCACCATGGTAAATCATCCGCGAGGTAGCATGCGTAAACAACGTCCTGGAAGAAGTCTTATTCGTGATAAAGATCGAAATACTCCTATACCACCGCCAGCACCAGCACAGGTGAAGAGTGATAAGGATGAAGACGAGAAAAAAGTTGTAGAGGATGAGAAAAAAGAAAAGAAGGAGAGTAAGAAGGAACAAGTGAAAGAAGAGGAAATTATCAAAATAAAGAAGAAAGAAGACTCTGAAGGAAATGCTAGCGGTCAGGAAAGCGATGTAAATGTGGAAGGAGATACCGAATCATCATCCAATAATGAAAAATCACAAAAATCGTCTGCGCAAATTCCAACATTAACTCCCAATGTGAGTAGTAATACAGTTGCATCATCTGGCCGAACCAAATCAAAAAGTAAAGAAGATACTAAGAAAAAGGTAGCTGAGAAGAAGAAAACAGAAACTAAGAAGCAAGAAAAAAAGGATGATAAAATCAAAGAAGAAGAAGCTACTAAGACGAGATCTAAGGCAAAAGATGATATCGTGAAAAATAAAGGCGCTTCCGAAGGAAGGGAAACTCGGACTCCATCTAGGGAAGCAGATAAGAAAACAGTGTCTAAGCAGCGACGTTTAACGGATGAAGAATTAAAGAAACGGGGAAGAAAACGCAAAGAGCATGAAACGGAAAAGTCACGTGCAGATGAACAGCTCACAGAGACAGCTCCCAGTTACAAGGGTCCTGTGGAATGTGGTGACAAATTAAAAGTTTATTACGGCCCAACTCATGAATCCAAAGTTACTTACGAAGCAAAAGTCATTGAAATAGAAGAAGGTCCAGAACCATTGTATCTTGTACATTATACAGGTTGGAACACCAGATACGACGAATGGATTAAAGCACCCAGAATTGCTCAGAATATTACACAAGCTCAAGGTAGGGTAAAGCGCATCAAAGCAACTCCCAGACCTCAAACTCCCAGTACGAATTCGTCTAACAGTATCAGTAGGTTAAAAAGTACTTGTAATTCGAGCATTAACGCATCGCAAAGTCGTCGCCGGGCACAAAGCGTTGCTCCTACTTCTACTAGCGCCGCTCAGTCAACTTTAACATCTGCGAAGGAAACCAAGAAGGAAGACAAAGAGAAGGACAAGGAGACAATACAACCAACCAGGTCCACTACTCCGCTTTCTATCGCTAGTTCTAGTTCTAGAACCAAGAGTCCCGCCACGCCAGCTAATCGGCTAACCAGAACGACCAGAAATGTAGAGTTATCTGGAGTGGAATATCGTAGGCGCACAAGGAGAACCTCGGGACACACAGATCTATCTGTTGCATCGGAAAGCGAGGATAGTGAAGGTTATGAATCTGACACTACCGAGCCTGAACAAACCAAGACCAGATTGAGAGGAATAGAAGAAAAAAAACGAAAGGAAGCGCGAAGTAGAGCAGAAGAAAGAATTAAAACGGACGATGTGACGATGAGCGATGGTGAGGACGATAAAGATAATTTGGATGAACCGCGTAAAGGTAGACGTTTGAGAAAAACGTCCGGCAAATCTCAAGGCATTAAATCCGAACCTGACAGTGACCAAGAGGAGCAACCAAAGGGTCGAGATTTTGATCTCAATCAAATACGATCCGAATTGAAAGGTTTTGACAAAGCTGTCAAATTAGAGATAGTCAGGGTGGAACCCGAGCCTGAAGACGAAGTCAAGCAGGACGAAAAAGAGAATGTGGCTGCGATCACGATGTCACCCAAGGTGGAGAAAACTGTCGAATCTCCAAAAGTGGAAATTGTGGAGCCAAAAGTGGAAAGCACGGAAGACATATATGAATTTAAAGAACCAGAACCATTTGAGTTCGAGGTAAGAAATAAGAGAGATAGTAACGATAAAGATAAATTAAAGAAGAGAATGTTCGAAGACGAGGCAAAGAGTCCGAAGAAAAAGCAGAAAACACCAGCTACAGGATCTGTAGCAAAGGAAACGAAATCGGAACCCCCAGAGAATGACTCTCGGAAGAAGCCGAGAAAATTGTTTGGCAAAAAATCTGATGATGCACACGAGGCACCAGTTATTGCTTCCAACAAACCATCCCATATCGCATCGTGCATGGCGTGTGAGGATGTTTTTAACAAATTTTGTGAATCATCTACATCATCCTCTGCATCATTCAATCAATTCAAATCGACTGTCACGGAAGAATCTGGTAATAAAGTAGTTGGTTTAAATCTCTTGTTCAACGATTTGCCAGCGGATGATGAAGGTACGCGCGATGATTCCGAGGATCGTCTAATAATATCGGAGACTGAGATATCGGAGATGGAACCAGAGAATGTATTTACCATGTATCAACAGGAGATTCAATTCCATAGCAGCAAATCGCCGAGTACAGCGGAATTAAGCAAGAACGAAGCAAACACTACGATTGAAAGTGTGAAGGACGAAACGTCAATAACTAGTACGAGCAATAGTAATAAGCCTATTAACATTTCGGATCAGAAACAAAATCAAATTAAATCATTACCAAGTCAAGCTGTGGCTGGACAATCGCAGTCAGAATTGAGGATGTTGGACTCCTCAAAGTTGCTCGATGTCACCCCGGTCCCACCGCCGATCGTGACTCCTCCAGCTCCCATAAGCGCGAGATTGCCAGCGACATCCACGATAGAAGAAAAATTATCAGCTGCGATGGCATTTCGAAGCAAAGCTAAAGATACCAAGAAGATTACGGAGGAAGATACGCCTGATTTCGTACGCGTAATCAAGATAATCAAGGAATCTAAGAAAATAGACATTACTACTCCACAAAGAAGCAAAGATGCGGATTGCAGTATTCCTGCGACCGAAATAAACAAGAAACGCGAACAAGAAAAAATGTCAGTGAACGAAGAGAATCTACGCAGAGAAATCATGCGTGTAGCAGTTAAACGAAAGGAAGAAGAATTATCGAAGTTACCGAAGAAAGAGGTGGAATTGAAGAAGTTCTCAGAGACAAAAGCGATCACTGAACACAAAACCAAATTGCAGGAAGTCACTAGAGATGAAAACTGGAGGAGCGTCGGATACGAAATGTCTGATAAAAAGCCCGAAGAGGAGTATAAAACAACGGATCAGAAAGAAAAAGATAGAATTGAAAGTCATAAGAAACAAATCAACCAAGACATTACAGATTCTACAGATAGCAGCGATTCGGAATTAAGACTTGTGATAGACAATGAGGAGTTGCAAGACGTTAAAGTATCAACACCTAATTACATGAAATTATCAGCGGAATTAGATCATTCCGCCGAAAAACGAAGCCACGGAGAGTAG
- Protein Sequence
- MLGDDPPSLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKPQGLGTATVADDQIRGTLRVGASVEVKHVDRKELVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSEDEDSPPRGARDSASSGGAKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSTLKVAVEKALLFLEKNELPPHWDRDSLFGHSVSSGNSDYDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINVCPMIGSEDIDLYRLFRAVYKLGGYNRVTNQNQWKAVTRRLGFTMQNSVPLYNLVKQAYKKVLHSFEDFYRKLGCTMVNHPRGSMRKQRPGRSLIRDKDRNTPIPPPAPAQVKSDKDEDEKKVVEDEKKEKKESKKEQVKEEEIIKIKKKEDSEGNASGQESDVNVEGDTESSSNNEKSQKSSAQIPTLTPNVSSNTVASSGRTKSKSKEDTKKKVAEKKKTETKKQEKKDDKIKEEEATKTRSKAKDDIVKNKGASEGRETRTPSREADKKTVSKQRRLTDEELKKRGRKRKEHETEKSRADEQLTETAPSYKGPVECGDKLKVYYGPTHESKVTYEAKVIEIEEGPEPLYLVHYTGWNTRYDEWIKAPRIAQNITQAQGRVKRIKATPRPQTPSTNSSNSISRLKSTCNSSINASQSRRRAQSVAPTSTSAAQSTLTSAKETKKEDKEKDKETIQPTRSTTPLSIASSSSRTKSPATPANRLTRTTRNVELSGVEYRRRTRRTSGHTDLSVASESEDSEGYESDTTEPEQTKTRLRGIEEKKRKEARSRAEERIKTDDVTMSDGEDDKDNLDEPRKGRRLRKTSGKSQGIKSEPDSDQEEQPKGRDFDLNQIRSELKGFDKAVKLEIVRVEPEPEDEVKQDEKENVAAITMSPKVEKTVESPKVEIVEPKVESTEDIYEFKEPEPFEFEVRNKRDSNDKDKLKKRMFEDEAKSPKKKQKTPATGSVAKETKSEPPENDSRKKPRKLFGKKSDDAHEAPVIASNKPSHIASCMACEDVFNKFCESSTSSSASFNQFKSTVTEESGNKVVGLNLLFNDLPADDEGTRDDSEDRLIISETEISEMEPENVFTMYQQEIQFHSSKSPSTAELSKNEANTTIESVKDETSITSTSNSNKPINISDQKQNQIKSLPSQAVAGQSQSELRMLDSSKLLDVTPVPPPIVTPPAPISARLPATSTIEEKLSAAMAFRSKAKDTKKITEEDTPDFVRVIKIIKESKKIDITTPQRSKDADCSIPATEINKKREQEKMSVNEENLRREIMRVAVKRKEEELSKLPKKEVELKKFSETKAITEHKTKLQEVTRDENWRSVGYEMSDKKPEEEYKTTDQKEKDRIESHKKQINQDITDSTDSSDSELRLVIDNEELQDVKVSTPNYMKLSAELDHSAEKRSHGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01422704;
- 90% Identity
- -
- 80% Identity
- -