Pcal016943.1
Basic Information
- Insect
- Pogonomyrmex californicus
- Gene Symbol
- grh
- Assembly
- GCA_017141365.1
- Location
- JAEVLP010000097.1:17284-32901[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-63 1.1e-58 199.1 0.0 24 221 333 531 319 533 0.93
Sequence Information
- Coding Sequence
- ATGGGCCAGAAGTTGCTGGTGCAAGAGGCGCCTGGCTCCGGTTCCGCCTCGACGAATCGCATGGAAGGCGGCGAAGGCGCCGGAGGGGGGGAGCTACACCATTTCCTCCAGTATAGCCAGCAGTCCCACAGTCCCAGTCAGAGCCTGCAGGGTGGCCTTCCGCTTCCGCTAAGCCCGCAGCCCCTGCGACACGACGGTGCCTCGAGCGCCGGCATCGTCGGGGTCAAGAGGGAACCAGAAGATCTCAGCTCGTCACGCGGGGGCCAACAGTCCAGCAAACGACACAAACAAGCGCAACCGGACAGTCCTACGCCACCGGGAATGTACCATCACCATCAGCATCAATTACAAGTGCAGCAATATGGCAGCCCTTACGACCCTTACACGTCCTGCAGTCCGCGGTTACAATCGGCCGCGTTCACGTCAACATCGGCGACCGGGACTGGGAATGCAACAGCGAATCCTGGTGGTGGTCTTCACCAGGAAGCGACGACGGTCTACGTTGCCAGCGACACGCTGCCACCATTGGCCTCGTCAAGTTCGGCTTCCTCGCTGTCCACCACGACTGCTTCGTACACGAGGTACGAGGTTGTACCGAGCTCATACGCTACGACACACGCCATACGCTCGTCGTCGAGCAGCAGCAAGGTTTTGACCGTTGATCTTCCCAGTCCCGACTCGGGCATCGGTGCTGACGCGGTCACACCCAGGCAGGACCATCATCCGCCCACGGCTCTTCATCAGTCCTCGTTCGACTACACGGAATTATGTCCCGGCGGGACAACAGCCGGAGCAGCGGTGGTTCTCGAGAGTGCGGTGATACATCAACCCTTGCAACTGCAGCTGCAGCAAAGCCACACACAGGCGCAAGTGCAACGTAGCAGTTTAGTGTCCGCGGGTGCAACAAATCCAAATCCGAACCCGAATCCACAGAGATCGCGGCCTTGGCATGACTTTGGTAGACAGAATGACGCTGACAAGATTCAGATACCGAAAATTTTCTCGAATTACGGATTTAAATATCATCTGGAGTCGCCGATTAGCACATCACAGCGTCGTGAAGATGACAGAATAACGTATATCAACAAGGGTCAATTCTACGGAATCACGTTGGAGTATGTGACCGATCCAGACAAGCCGCTTAAGGCAGGACAGACGGTAAAGAGCGTGGTAATGCTCATGTTCCGAGAGGAGAAGAGCCCAGAGGACGAGATCAAGTCTTGGCAATTCTGGCATGGCAGACAGCACTCCGTCAAACAACGGATTCTCGATGCCGACACAAAGAACAGCGTTGGACTGGTGGGCTGCATAGAGGAAGTCGCGCACAATGCGATTGCCGTTTACTGGAGCCCACTCGAATCGTCGGCGAAGATAAACGTTGCGGTGCAATGTCTCAGTACCGATTTCTCGAGTCAGAAAGGCGTGAAGGGTTTGCCGTTACACATCCAGGTCGATACGTATGAGGAACCGCCACCTCACACGCACACGTACACGCCGCCTTCCCATCGTGGCTACTGTCAAATTAAGGTCTTTTGTGATAAGGGGGCAGAAAGGAAGACCCGGGACGAGGAGAGACGCGCAGCCAAAAGGAAGATGACCGCGACCGGCAGGAAAAAGCTCGATGAGCTTTATCACCCCGTGACAGAGCGCAGCGAGTTTTACTCCATGGTCGATCTGCATAAACCTCCTGTATTATTCTCGCCGCCGGCCGAGCACGCCATCGATAAGTTCTCGACGATGGAGTTGTCGGGCTTCTACGGTGGTGGCGGCGGCGGGGGCGGGGGTGACACCGACACCTCGTCCCTCAGTAATGGTGAAGGTGGAGGATTAAAGGCGGCGGGCGGTAGCAGCCCCTATCCGGCGGCATGCGGCCGGCCGAGTCTGCCTGCCCTCAAGTTCCACAACCACTTTCCGCCCGACAATCTCAGTAGCCTGCACGACAAGAAGGACTCGTTGCTGATGCAGGTACAGGAGCTACAGGGCTCGGTGCTGGGGGTGCAACAGGCCGGTCTGACAGGCGCGGTGGTGTCCAGCGTCGGCAATCGACTGCATCTACAACAGCAGCCCTCGCATCTGCGCTCGGCGGACGCCGAAGACCGCGTTATGCTTTACGTGCGTCAGGAATCGGAGGACGTCTATACGCCATTGCATGTCACGCCGCCGACGGTCCAGGGGTTACTCAATGCTATTGAGTCAAAGTACAAAATTGCATCCTCGAGTATTAATAATCTCTATCGCAAAAACACAAAGGGAATTACAGCGAAAATTGACGACGACATGATCCGATATTACGTCGACGAGGATCTATTCCTGCTGGAGGTGAGCCACTCGCGAATCAGTCCAGACAGCGAACGCAACCCGAACAACCCGGGCTCGCCGGGTGATCCCGGAGATCCAGGTGATCCTCCTACCACTGGCGGATATGACGTGACACTTATCGAGCTACCCTCGTCGCCTCCGCATATGCCACATTCACCCCTTGCCAATTCTACGCATGGACATGTACATGTTCACGATAACAGTAACACATGA
- Protein Sequence
- MGQKLLVQEAPGSGSASTNRMEGGEGAGGGELHHFLQYSQQSHSPSQSLQGGLPLPLSPQPLRHDGASSAGIVGVKREPEDLSSSRGGQQSSKRHKQAQPDSPTPPGMYHHHQHQLQVQQYGSPYDPYTSCSPRLQSAAFTSTSATGTGNATANPGGGLHQEATTVYVASDTLPPLASSSSASSLSTTTASYTRYEVVPSSYATTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPPTALHQSSFDYTELCPGGTTAGAAVVLESAVIHQPLQLQLQQSHTQAQVQRSSLVSAGATNPNPNPNPQRSRPWHDFGRQNDADKIQIPKIFSNYGFKYHLESPISTSQRREDDRITYINKGQFYGITLEYVTDPDKPLKAGQTVKSVVMLMFREEKSPEDEIKSWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWSPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEEPPPHTHTYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTERSEFYSMVDLHKPPVLFSPPAEHAIDKFSTMELSGFYGGGGGGGGGDTDTSSLSNGEGGGLKAAGGSSPYPAACGRPSLPALKFHNHFPPDNLSSLHDKKDSLLMQVQELQGSVLGVQQAGLTGAVVSSVGNRLHLQQQPSHLRSADAEDRVMLYVRQESEDVYTPLHVTPPTVQGLLNAIESKYKIASSSINNLYRKNTKGITAKIDDDMIRYYVDEDLFLLEVSHSRISPDSERNPNNPGSPGDPGDPGDPPTTGGYDVTLIELPSSPPHMPHSPLANSTHGHVHVHDNSNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01406994;
- 90% Identity
- iTF_00765307;
- 80% Identity
- -