Pcal032755.1
Basic Information
- Insect
- Pogonomyrmex californicus
- Gene Symbol
- Nfil3
- Assembly
- GCA_017141365.1
- Location
- JAEVLP010000065.1:469519-470925[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-10 1.8e-07 32.0 0.3 10 59 19 68 17 73 0.91 2 2 1.5 2.2e+03 -0.4 0.0 42 52 279 289 272 292 0.68
Sequence Information
- Coding Sequence
- ATGGTGGCAGAGTTTGTCGCCCGCCAAAGTGGATCGCCCATCAATGGTGAGACCGCGCGCAACAACGAGGCGGCCAAGAGATCGCGCGAAAAGCGCCGCTTCAACGACATGGTCCTGGAACAACGGGTGATGGAACTCAGCAAGGAGAATCACATTCTCAAGGCACAGCTCGACGCGATACGCGACAAATTCGGGATCTGCGGCGAGTCCGTGATTAGCACGGAACATGTGCTAGCGGCGTTGCCCGCAGAGCCCACGATCAGCGTGAAACGCGCGAAGCTGCCGGCGTCGGCGGCGCTTCTTTACGCGCGCACGCCGAGCCCGGTGCACACCTCGGTGATCCATCAGCCGGTGAGCGGCGCCCGTTCACCGAGATCACCGGCCTCGCAGCTCTACGTGCCCGAGACGACCGCTTACCCGGAGACCGAGAGCTTCCAGTATCCGTACTCGCACCCGGCGATGCACCACCTGGACACCACGAGCGCGCTGAACCTGTCGTCGCGCGGTCGCCGGGCGCAATCGCCGTTCGAGCTGTCCTCGGGCAGCGGCGACGAGGCCAGTCCTCAGATGGTCGTGGGATCCCAGAACAATCCGGCCGCCAATAACAGTCTGCCTCACAAGCTCAGGCATAAGTCGCGCATCGGCGACAAGGATGCCGCGAGCGCGCTCCTCGCGCTTCAGGGCATCAAGCAGGAACCCGGCCCGCGAGCGTCGCCGCCCTGGGACGAGGGCTCCAGCGACGAGCGTGACTCCGGCATCTCGTTGGGCGCCGAATGGACCGGGCCGACCGTCACCGCGGTCTCGGAGAGCGATCGGGAGGTGAAGATGAAACTGGACCGCCTCGCGTCCGAAGTCGCGTCCCTGCAATCGATATTCCGCCTCAAACCCGCCGCAGCGGCGGCTGCGGCTGCGGCAGCGGACAGCCTGGTGACGGGTCACTCTGCCGCCACGGTCAGCGGACCGTGA
- Protein Sequence
- MVAEFVARQSGSPINGETARNNEAAKRSREKRRFNDMVLEQRVMELSKENHILKAQLDAIRDKFGICGESVISTEHVLAALPAEPTISVKRAKLPASAALLYARTPSPVHTSVIHQPVSGARSPRSPASQLYVPETTAYPETESFQYPYSHPAMHHLDTTSALNLSSRGRRAQSPFELSSGSGDEASPQMVVGSQNNPAANNSLPHKLRHKSRIGDKDAASALLALQGIKQEPGPRASPPWDEGSSDERDSGISLGAEWTGPTVTAVSESDREVKMKLDRLASEVASLQSIFRLKPAAAAAAAAAADSLVTGHSAATVSGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -