Pcal012400.1
Basic Information
- Insect
- Pogonomyrmex californicus
- Gene Symbol
- TEF
- Assembly
- GCA_017141365.1
- Location
- JAEVLP010004412.1:17906-18880[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-12 2.2e-09 38.1 8.4 4 46 267 309 264 314 0.94
Sequence Information
- Coding Sequence
- ATGAAGATGGAGAATACCACAAATAATTATACGCAAAATAATCAAAGTCCTTATTTCATTCTTGAGGAAACGGATAATAAATACTCAGACTCAGACTCGATTCTAGATTTATCACAAAAAAATCCGACTGATAATACAAATCAAGAAATAGCCATTGATTTATCATCACGCTCTTATGGAAGCAAAAAGCGATGCGTAGAACTAAATGATTTGGATGGTAGACCTATCGAAAATATCGCCGTATCGTCCCAATATTCCGAGTTGGACTCGTCAAAAGCACAGACAAAAGCTGCATCGTCCCCTGAAAATATCGAGTGCTTTAAATATATTGAGACATTATTTAAATGTTCATCAGGCATAATGTTGCCGTCACATCTAAATAGAGCTCAAACGGTAGTAACAACTCCGGCAAATCTCCATCTACCATATACGGATACAGCGCAGACTATTCCGAAAAATGAGATTAACGGACAAACCCCGGGAACGATGCCAATAGAATTTCCAACATCTACGAATGTGATATTGCCATCGTCAACATCTACGAATATGATATTGCCATCATCAACATCTACGAATACGATATTGCCAACATTGGACATGGTGAAAAAGGCATCGAGACCTTTTAAAGCCTATCCGAAGGATCTCCTTTCCACCCAAGACTCGAATAAGGAATATGTAAAGTTTCGGGCAAAGGTGCTCGAGAAAGTTAAAAGGAACAGAAACACATCAAATCCTAGAATGCGCCGAGTGTCCAGCAGTCCTGGACTGCCTACTAGCACCGTCGATGAGAAGGACGCTGCATATTGGGAAAGAAGAAAAAAAAATAATGAAGCAGCCAAACGTTCCAGAGATGCTCGAAAATTAAAAGAAGACGAACTTGCAATCCGAGCAGCTTTCCTTGAACAGGAGAATCGAGAGCTCAAAACTTTATTAGCTAAGTATGTTCAGATAGTTCATTCGTTCTACAACCATTAG
- Protein Sequence
- MKMENTTNNYTQNNQSPYFILEETDNKYSDSDSILDLSQKNPTDNTNQEIAIDLSSRSYGSKKRCVELNDLDGRPIENIAVSSQYSELDSSKAQTKAASSPENIECFKYIETLFKCSSGIMLPSHLNRAQTVVTTPANLHLPYTDTAQTIPKNEINGQTPGTMPIEFPTSTNVILPSSTSTNMILPSSTSTNTILPTLDMVKKASRPFKAYPKDLLSTQDSNKEYVKFRAKVLEKVKRNRNTSNPRMRRVSSSPGLPTSTVDEKDAAYWERRKKNNEAAKRSRDARKLKEDELAIRAAFLEQENRELKTLLAKYVQIVHSFYNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228154;
- 90% Identity
- iTF_01228154;
- 80% Identity
- -