Pbar008863.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- Zmiz1
- Assembly
- GCA_000187915.1
- Location
- NW:194813-227202[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2 1.1e+04 -5.8 2.5 5 22 461 478 459 481 0.79 2 2 9.8e-26 5.2e-22 76.6 4.4 1 50 554 603 554 603 0.98
Sequence Information
- Coding Sequence
- ATGGTAGCAGCTGCCTCCGCTACGGCCACCGCCACTGCCAGCGTGGTGGCCATGCAGGACCGCCAGGACATCCCCTCGCAATTCAATCAGATGCAGAGCCAACATGGAATACCCCACCAAACGTACCCCGTGGCGGGGTATGGCCAAAGAGGACCAATGGCAGGAATGGGGCCAGTCGGGATGAACAACTTCAACGGCATAGGCACAATGAGCCCGATGCACACTATGAATTCCATGAATTCGATGAACAGTATGAGTGGCATGAACACGATGAATCCTATGACAATGGGAGGAATGAACGGTATGAACGGTATGAGCGGTATGAATGCTATGAGTGGAATGACACCCATGAACTCCATGAGCAACATGGGCAACGTAGCCATGAACAATATGATGGGACCCAATAACATGCAAATGAACAAAATGCAGGCTCAATCGCATCAAGGCTATCCGCGAAGATTAGCGCCTTATCCGAACCCAGCCATGCACATGGCGCAAAAGCGACAGCAAGTTCCGTATCCCGCTCAGAACCCTACGGCTATGCAGCAGGGCTTCAACGGCATGACGGCAGCGCCGAATTATCCGAACGCCTATCCCACCGGGGCGAGGCCGAATTTTCAACAGCAGTATCAGTCCATGCAGAGCATGAATCCCACAGGGGCTGGTTTCGGACCCAACGCGATGATACGAGGAGCGAATATGAGGCAAACGGCACCGGCTTACAACACCCCCTCTCAGACGGCAGCAGCGAGCCAATATGGTTATGGAAATAATGGCGTTTCGGGGGTTTGTATGGTTCCCCCTACTTCGGTCGGTAACCAATTCGTCGGCCATCAGCAAAATACGGGAGTAGGATATGGTGGGAATGCGTCGTACGGCGCTTCGGGCGTGGCGACCAGTCAGTATCAGCAGGATGTAGCATCGATGAGGTCGACAAACGGAGGTAACATGAATTATCAGCACAGTCCCATCCCCGGTAATCCGACGCCACCGTTGACACCCGCCACCAGTATGCCGCCTTACATCAGTCCGAATCCGGACATCAAGCCTAACTTCAATGAGATGAAATCGCCCGGCAATATTCAAAATGACGAATTGAGACTAACATTCCCCGTGAGAGACGGTATAATTCTTCCACCTTTCCGCCTAGAGCATAATTTGGCTGTTAGCAATCACGTGTTTCAATTGAAGTCCACGGTGCATCAAACGTTAGCGTGGCGATCAGATCTGGAGTTGCAGCTCAAATGTTTCCATCATGAGGATAGGCAGATGAATACGAATTGGCCGGCGAGTGTGCAAGTCTCCGTTAACGCGACTCCCCTCGTGATCGATCGCGGGGAGAACAAATCTTCCCACAAGCCTCTCTATTTGAAGGACGTATGTCAAGCAGGAAGGAACACGATACAGATTACCGTATCCACGTGCTGTTGTAATGCGTGTTCTGTTTCACAGTCGCATCTATTTGTACTCCAATTGGTTCATCGACCCAGTGTACGAAGTGTGCTTCACGGATTACTACGTAAAAGATTGTTGACGGCAGAACATTGTATAACGAAAATCAAAAGAAACTTCAGTAATACAATGTCAAACAATGGTATACAGTCAGAGAAAGACGTAGTGGAACAAACAGCACAAAAgttatgCGGATCTTGCCAACAGGTATCTTTAAAATGTCCTATCACCTTTAAACGCATTACACTGCCAGCCAGAGGACACGATTGCAAGCATACACAGTGTTTCGATTTGGAATCGTACTTGCAATTGAATTGTGAACGAGGAAACTGGAGATGTCCAGTATGCtcGAAACCCGCACAGCTGGAAGGCTTGGAGGTCGATCAGTATATGTGGGGTATTTTGAATACAATAAATACCGCAGAAGTTGACGAAGTGACGATAGACTCGCTCGCCAACTGGAAACCCACCAAGAATTCACCTGTTAAGTCTGAAGAAGAGAATGATTGTAAACGAACAACCAAGGCGATGTCACCGGGCAGTATGAATATGCCAACTATGAACAATTGGGATATGAACCAAGCTATGAGTCCTTATATACCGCCCGACATGAATAGTATCGTGAGTGGTTCGATGATGAATAATACATCTTCCACGTACCAGAATAACAGCATGAACCACCGGAATACATCCGGCGGAACGTACGAGATAAATTCCGGGACGAATACTATCGGCAATAATGATTATGTCAGCGGAACAGGTCCGCTTTCACACTTAAACGAATCCGTTAATTCTTTAGATCCTCTCAATGCTATGGAGAAATCACTCAACGACCAAATGCCTCATACTCCTCATACGCCACATACCCCGCAATCTACTCCTCACACACCGGCTGGTGGTGCCAGTGGTCCGCCAAGCGTTCCGCCAGCATCACAAGAATCTACGGGAAATCACAATACCTCCGGCAATACAAGTACAACTATAAATAATGACACCGCTACGGACATACCGTCGGACTTAAATTTCGATCCCGCCGCAGTTATAGATGGAGAAGGTACCGGCCAAGAGGGATTGAATCTCTTACCAGACAATGTAGATGCGATGGATCTCCTCTCGTATCTCGAACCACCGGACCTAAACACTCCCCCTAGTAGCGGCGCCAGCAGTGGCAATCCTTCCTCTAACGACGACATATTAGCACTCTTCgagtaa
- Protein Sequence
- MVAAASATATATASVVAMQDRQDIPSQFNQMQSQHGIPHQTYPVAGYGQRGPMAGMGPVGMNNFNGIGTMSPMHTMNSMNSMNSMSGMNTMNPMTMGGMNGMNGMSGMNAMSGMTPMNSMSNMGNVAMNNMMGPNNMQMNKMQAQSHQGYPRRLAPYPNPAMHMAQKRQQVPYPAQNPTAMQQGFNGMTAAPNYPNAYPTGARPNFQQQYQSMQSMNPTGAGFGPNAMIRGANMRQTAPAYNTPSQTAAASQYGYGNNGVSGVCMVPPTSVGNQFVGHQQNTGVGYGGNASYGASGVATSQYQQDVASMRSTNGGNMNYQHSPIPGNPTPPLTPATSMPPYISPNPDIKPNFNEMKSPGNIQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKSTVHQTLAWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGENKSSHKPLYLKDVCQAGRNTIQITVSTCCCNACSVSQSHLFVLQLVHRPSVRSVLHGLLRKRLLTAEHCITKIKRNFSNTMSNNGIQSEKDVVEQTAQKLCGSCQQVSLKCPITFKRITLPARGHDCKHTQCFDLESYLQLNCERGNWRCPVCSKPAQLEGLEVDQYMWGILNTINTAEVDEVTIDSLANWKPTKNSPVKSEEENDCKRTTKAMSPGSMNMPTMNNWDMNQAMSPYIPPDMNSIVSGSMMNNTSSTYQNNSMNHRNTSGGTYEINSGTNTIGNNDYVSGTGPLSHLNESVNSLDPLNAMEKSLNDQMPHTPHTPHTPQSTPHTPAGGASGPPSVPPASQESTGNHNTSGNTSTTINNDTATDIPSDLNFDPAAVIDGEGTGQEGLNLLPDNVDAMDLLSYLEPPDLNTPPSSGASSGNPSSNDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00863647;
- 90% Identity
- iTF_00129412;
- 80% Identity
- -