Pbar002223.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- GATA5
- Assembly
- GCA_000187915.1
- Location
- NW:277359-286306[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-17 5.7e-14 50.7 3.2 1 35 536 569 536 570 0.97 2 2 4.2e-18 5.5e-15 53.9 6.8 1 35 595 628 595 629 0.97
Sequence Information
- Coding Sequence
- ATGACGAATGCAACAACAAGGAGAACGCATCGCCTCGTTTGGCACCAAGTAGTAGAGATTCACCGACGGAGCTTTGCTACGATTCCACCTCTTTCCTTTccaccttctctctctttgtggGACATCACGGATATGATAAAAGAGCCGTTGGTAAAGCAGGAGATCAAGATGGAATGGGACGGTCATCGCACGGATGATAATTCACCACAAATTTCTGGAACGGAAGATCAGACAGTCGGGAGTCCTCAAAGCGTAATAACGACCAGAAGACATGTGAGAACGATTACAACCGCTGGTCATATAACCGAAGGAATTGCCGAAATCGAACCGGAATCGCCAGATTCCAATTCAATTACCGGAAATCTTCATCGAGGACTTCAACAAAGAAATGAACATGAACAATCTCACCAGCGTAATTTCCAAGAGGAACAGCAACGAGCTCATCAAACGCAGCATTATGTACAGATTTCCCATACAGGTAACGAGGATCAACAACGATCGACGGATCAGCAACGTGTCGTTTATGCCACCAGCAGCGGGCAGGAAGTTCAGGTCGAAGTTTCCGAAACCCCCGAGGCTACTATCACGCTTACAGTCAAGGAACCGCCCAGATACGAGACACCCGCACCAGATAGAACGGAAGTAGACCGCATGTATGCTTATTCCGACGGTCACGATGTCCGAAGGGAGAACCATGTGATCACCGTACAAGTACCCGATCATCGACGAACCCAACAAACAGGGCACCAGAGATTCAGCCCTCATGAGAGTCATCAGACATCCGGTACGAGATATCAGACGTCGCCAGTTTTGAACACAACAGAGGATTATGACACTTCAACGATCGTTACGCAATCAGGATCTACGGTCCATCTCGGATCACCGGCACCGCCGTATTCACCGCCGATCGATGGTATACGTCCTGgccaacagcaacaacaactcGTAGCAACGAGTTACGCTGACGGTGTCGTCAAGTACGACACCGAGGCCGCGGCCGCCGCGGAAACTATCAAAAATCCCAACACGTACACCACACTGGAAACAGTCGCTATTCCACCCACGCAAACCGTCCAATACACACAATACTTGTCGGGTAGCGAGACTTTTCAACAGGCGCCGACGTATAGCTACGCCAAACCGGGAGATTCTATGATCTTGACGTATCCATCAGCGCAACTTAGCTCAAGAGTTACCGAgGTAGAATCACCCGGCAGCGCGTATATGAAGGGCGATCCTACGTTAACGTCGTCCTTGGCCGCTCGAGCGGTTCCATTGCATTATGAGCAGCCTGGTTCACCGGGTTCTCAAGTGACCCTGTACAGCACAGGTGCGACATCGTATCAATATGTAAAGCCTCCCTCGGGTGATCCTTACTGGCCGGCCGGCAACACCCCCTCGCCACCGACTTTGGAGTACGTTCAAAGCTATCCGAGCATTACCGCGATTTCCGTAAGCGACACCACCAACGTGCAGCTATATGCCGGCGGTGCGTACAGCGTTTCCGCGAGCGGGAACGGACCGCCCGGTGGATGGACCACTCTTCCGATTCCTGGTACCGACGAGGCATTCGACGGAACGGTCATAGCGCCGGAACCCAAAGAATGTGTTAACTGCGCAGCTAGTATGACGCCATTATGGAGAAGGGACGGCACCGGACATTATCTTTGCAATGCTTGCGGTCTCTATAACAAGATGAACGGCGTCAACAGGCCACCCATGAGATGTCCTAAACCGAAACAGTCGGTTGCACCGGCTAACGTACGGAGGACAGGAGTACAATGTGCAAATTGTAACACGAGCAACACAACTCTCTGGAGACGAAACAACAATGGTGAACCAGTATGCAATGCATGCGGTCTTTATTTCAAGCTGCACAatGTGAATAGACCTCTAAGCATGAAAAAGGAAGGAATACAGACGCGGAAGAGGAAACCGAAGAATCATTCAAACATTACCGGAAATCTACCTGGACCCAGTGGTATCCATAAGACCGAGATCAAGTCCAGTCTACTTGTGGACTCGTTGCAGTTGAACATGTACGCAAGCGGGGGTGGGGGTGGTGGAGGGGTCGACGAGCATTGTCTTCCTGTAGGTACACCAACTGGGGCACAATTAGGGCATGCACACTCGCCCCTCGCATTACCTACCGCCGCCGTATTGAATCGCCAAACTACCCTTACCGTACCACCACTAGAACCAATCACTAGTCAATCCAGCAGCGACATCGCTTCGGTTATAACGTCAACTACGACGACTCATGCTGAGAAATCGTAA
- Protein Sequence
- MTNATTRRTHRLVWHQVVEIHRRSFATIPPLSFPPSLSLWDITDMIKEPLVKQEIKMEWDGHRTDDNSPQISGTEDQTVGSPQSVITTRRHVRTITTAGHITEGIAEIEPESPDSNSITGNLHRGLQQRNEHEQSHQRNFQEEQQRAHQTQHYVQISHTGNEDQQRSTDQQRVVYATSSGQEVQVEVSETPEATITLTVKEPPRYETPAPDRTEVDRMYAYSDGHDVRRENHVITVQVPDHRRTQQTGHQRFSPHESHQTSGTRYQTSPVLNTTEDYDTSTIVTQSGSTVHLGSPAPPYSPPIDGIRPGQQQQQLVATSYADGVVKYDTEAAAAAETIKNPNTYTTLETVAIPPTQTVQYTQYLSGSETFQQAPTYSYAKPGDSMILTYPSAQLSSRVTEVESPGSAYMKGDPTLTSSLAARAVPLHYEQPGSPGSQVTLYSTGATSYQYVKPPSGDPYWPAGNTPSPPTLEYVQSYPSITAISVSDTTNVQLYAGGAYSVSASGNGPPGGWTTLPIPGTDEAFDGTVIAPEPKECVNCAASMTPLWRRDGTGHYLCNACGLYNKMNGVNRPPMRCPKPKQSVAPANVRRTGVQCANCNTSNTTLWRRNNNGEPVCNACGLYFKLHNVNRPLSMKKEGIQTRKRKPKNHSNITGNLPGPSGIHKTEIKSSLLVDSLQLNMYASGGGGGGGVDEHCLPVGTPTGAQLGHAHSPLALPTAAVLNRQTTLTVPPLEPITSQSSSDIASVITSTTTTHAEKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01229423; iTF_01099570; iTF_01016213; iTF_01477974; iTF_01422595; iTF_01424048; iTF_01476611; iTF_01477261; iTF_01423312; iTF_01421905; iTF_00015737; iTF_00016381; iTF_00181656; iTF_00182324; iTF_00182973; iTF_00017018; iTF_01262140; iTF_00015074; iTF_00899197;
- 90% Identity
- iTF_01229423;
- 80% Identity
- -