Pbar002399.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- CSRNP3
- Assembly
- GCA_000187915.1
- Location
- NW:21805-59222[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1 1.1e+04 -5.3 5.4 53 86 243 275 214 313 0.44 2 4 0.12 1.2e+03 -1.6 1.5 92 140 529 579 514 613 0.58 3 4 5e-101 5.3e-97 323.3 8.8 1 218 896 1108 896 1108 0.92 4 4 0.0085 90 2.1 1.2 62 94 1351 1383 1338 1411 0.46
Sequence Information
- Coding Sequence
- ATGGCGGAAGCGAGAGTCGTCATGTGGCGCCATCTTGATATGCTTCTCTACCGTTGTGTACTCATTCTGCCGCCTCCCGTCCTGGCAAGAGGACCTGACCGTCGTGATCGGAGGCAGGCCGATGTGCCGTTCGTGCGTGCGTGCCCTGCTCAAGATGGCTTTGTCCGACGCGGCGCCGCAGTGATATCGCATAGAGCAAAGTATCGGCCAGATCCAATCCAAATTGGATTACTCTTGAGTAAGCTGAAGGAAGGTGAAGAAGACCGCCAGCACGACGACACACATCACGATcacgacgacgaggaggaagaaggTGGTAGTCGGCAACTTCCTCAGTGGCGCGGAGATGTGACGCTTGTCGGCGAACCGATGGCAGAAACACCCGAGATGGAATCGCCTTTGGCCCGTCAGGACTGTTTCGTTGAGGCCCAAGAGGATTCCACCTCAGTGGAGGCCGATACGGAAGACGTGTCAACATCGGACGGGACGACATCAATGACGACAACAACGGCAATATCGGATACTATCGACGACGATGACTATGCGGCACGTCCATCCGTCCTGCGAGATTCGCGTAAGGACTTGACGGTAATGTGCGAGAGATTGGACGAGAAATCCGAAGCCGAGGGATCCGAAGCAAGACAATCGAGTGATTATCCTTGTCTCCCAAAACTGGAGGAGAATCAAGTCGAAGAGAAGAAGGGTCAGATCGGGGAGAAGGAGGATCAGGAGAGAGGacaggaagaggaggaagagaagaaggcAAAAAATGGAAACGAGAAGGACGAGTTCGGTGCGAAATTGATGGAAGATTCTCTTCAGAAACTTGAAGAGTCGCCGAAGACGGCTGAGTTTCAGAATCACGACATCGAAGAGTTCTCGGGGGTGCAAGAGAGCCAGATAGGGACGTCCACATCATCGGACGTCTCCAGAAAGAGGTCGGCCGCGGATGATTTTTTGCCGATTGGTACGGAGGCCAAGAGGATCGGCATTGAAATCTCGGAGGAGCAAGCGAATCAGCTGAAAAACGATATTAGGAGGCTGTCGCCGGTGTTAGTGAGCCTGCGGGAGAGGACCCTGGGCGAAGTGTCCCTGACCTCGGAATCCTATCTCTTCGGGAACGATGTTGACGGTAGGATAATTTCAAGCTGCAACGACGTTCCGGCAGAATCTTTTGTGACGAATGATTCCAAGATTCATGATGTTGATCGGAACTGTGAGAAGCAGGATATCGGcgaggagaagaaagaaacgatCGTCAGGATTGGTGTAAGTTCTTTGGAGTGCACGAGCAGCGCCAACGTTGGAGACACGTCGAATTGCGCGAGTAAAAAAATGGATTGCGACAACGAGGAGGAGATTACGACACTTGACGTAGCTTCTGTTGTATTGTCGAAAGGTGACGATTTGGACGGCACAACGGAGTCGCGTCAAGACGATGTCAGAGACACAAACGTGATCACAAACGCTGAAAGTGCGCTTTGCACTCCGACGAAAAAGTGTGTTGTTGATACGACGATACCATCAAGTCCTATTTGTCGAAATTTAACCGTTGTGCTGAATCGTATCgaagagaaagatataaagaaaaggaaCGATCAAATGGACAGAGACATCACTGAGAATATGTGGGACTATGTCGTTGAGGAGAGTTTGCCTTCCAATAGAAGAAGAGATTTCGTCGAGGAGGAGCGTGATTCGGTTGTTGAATCTTGTGAATCTGAAGAAGCCCAGGAGAAGAACGCGAAGAAGCAACGATGGCAAAGCGATTCCTCTCCAATAACCAGGTCAAGGAAATGCGAGCTGACAGAGAACGGAACTTGCAGTCCGGATAGTGGATTGGTCCTGAAGAAGTGCAAGGTGGTGCTGGAGAGAATCGGTGAAATCCTGGGACATTCGTCACAAGGAGAGAACGCCGAGGAAAACGGAATCATAAGTCAAGAGTTTGAGAAAGATGACGAGTCTGCGCCTGTAGCGATAATCGGCAAGCTGGAAGAGGATGAGGAGGTGGTACTGGCGAGCTCGTCGCTCACGGCTGAAGATAGCCGCGCGTCTAACGAGCTGGACTCATCGGAGACGATGCCAAGCTCGCCAGAGGAAGCACCAGAAGCATCGATAGAAGTCGCTGAAGGCGTCGATACCGAGACAGAAACGGAAACCGGCTCTGATAGTTCGGAAGTATCACCCATCACTAGCATTCGTCACGAGCTACGCGACGTCGACATGGCGCCCGATCAACTACCCTGTTCTGAGGGAGTCGCTCTGTGCTGTGTGGAAGCGATGGCGCCGATTATGACGAGATTGGAGGCCGAACGGCCGGAAGCGTATACGGAGGACTCTGCTGAGAGTTTGGCCTTGGCGACTGGCGCCAGGGACGAGGTCAGATCCGACGGGAGTGATTCCGGTCTGGGGAATGAAATCCCCGGTGACTCTGGACCAGCGCCCGCACCGGAAAGCGACTCGGAGACATCCTTCCTCGACAGATTGCCGGACGACATCCTCTCCGACAAGGAGAAAGGCGTAAACCAATTGGACAGCTATGCGCCGTCCTCGGGTGCGTCTGGTGCACCGGGTCAGCTACCTCTGACGAGCTTTCAAACACTTCCGGCCAAAAGCAACCTGAAGCGCAGGCTGACCGATTGCATGGAGGGTGACGAGTCACGGAGCAACGTCGACGAGCCCGTGAAAAAGAAGCGCAACATCCAGTTCGATGCAGTGACAGTCTATTACTTCCCTCGGGCGCAGGGCTTCACCTGCGTACCTTCTCAAGGCGGCAGCACCCTGGGCATGAGCGCGACGCACACACACGCGGAGAGGTTCTCGCTGTCGGAACACGCGGCCGAGCAAAGGCGGATTCATCGCGCTCGCCTCGCGCAGCTACGCTCCGAGCGCAGCTGCGCGACCAACTGCGTAACCGAGACGGCGTCAAGTTCGGAGGATCCGAGCGATGACACCGACGAGGAGCCGAGCGACAACGAGGAGCTCGACATCGATAGCTACTACTTTCTACAGCCGGTGCCCACGTGGCAGCGGCGGGCGCTTCTCAGGGCCGCCGGTGTACGAAGGATAGACGCCATCGAAAAGGACGAGTGCCGGGATATTCGCGCGAGCAGGGAGCACTGCGGGTGCGGCTGCAAGGGGTACTGCGATCCCGAGAGCTGTCCTTGCAGCAGGGCCAACGTAAAGTGTCAGGTGGATCGTCCAGGTTTCCCTTGCGGCTGCACGCGGGATGGTTGCGCAAACAGCACAGGCAGGATCGAATTCAACCCCGTGAGAGTACGAACGCATTTTATCCACACGCTGATGCGATTAGAACTGGAGAAGAAGCAGCGTGAGGAAGACGGTGGCGGTGATCATGACCAGACGGACAATCAGGGACAGCGCGACAGGAGTGCTCGTCCTTTGAGGGATATCGGTTCTTTAGGCATGGAGACAACCGTAGCCGGTGACGCGTGCGCGATTCCGGGTACAGGACCCGGAGGCGGAGGGGGCGGATTCACGACGTTGCATTACGAGACAAGTCACGAGGGTGTCGGGGCTGGCGTGGTAGCGGGCGGCTGCCAACCGGAGGTGCCTGGTACGCGAGAGGACAGCCTGGATTTATATGCCATCAGAGATGACTGTTACGCGAGCGAAGACACGGTGGACAGCAGCCAGTCAGGCGTTGTGCAGCGGAAATTGCATCCGGAATTTGGCCAGGCCTTCCAGAGCTTCTCGCCCGGTGGCCAAAGCGGCGGCACCGCCGGCGCgggcggtggtggcggtggtggcggtggtggcagTAGTGGCAGTAGTAATGGCGGTGGCATGAGCTTCCAGCAATCCTCTTACCAGGATTATGGATCGCCATACGCGGGACTCCCATCTACGTCGCGAGTCCAATTCCAACCGTCGCCGTCGCAGTTTCAGTCGCCATCAAATCCGGCTGCTTTTGCGCATTACGGATCCTACGGCGGACCACAAGATGCCGCGAGTACTGCACTTCAAGGCTGCACCGGCCAGGTTCATCAAATGCCGCAGCCTCCGCCGCCGCCATCGACATCGCAGAgtcaacagcagcaacagcaacagcagcagcagcagcagcagcaacagcattCGTCTTACGATGCGACAGTGTTCGCGCAGGATGATGCCACGAGTACCACACAGTACACGAACCTCACTAATTCGGTGCAGCCAATGAACGCGACGGTGGTGCAGCAGATGCAGGGTAAGCTCGAGCCTTTCTCGGAGCTGCTCAGCGGCAGATACTCGTATTACGGCGAGATGCACGAGCCGCAGCAGCACCATAATACATACGGTACTCACGGAACTACCGGCAAGATCGCGGAAATAATCGAGCCCGATCAAGTCACCGGCGAGCAACAAGCCGATAGCACAGTTGAGGATTGTGACGAGAACTTCGGCGAGATTATCAAGAAGTCCATGGTTGAAACTGTGTCTGCCTAG
- Protein Sequence
- MAEARVVMWRHLDMLLYRCVLILPPPVLARGPDRRDRRQADVPFVRACPAQDGFVRRGAAVISHRAKYRPDPIQIGLLLSKLKEGEEDRQHDDTHHDHDDEEEEGGSRQLPQWRGDVTLVGEPMAETPEMESPLARQDCFVEAQEDSTSVEADTEDVSTSDGTTSMTTTTAISDTIDDDDYAARPSVLRDSRKDLTVMCERLDEKSEAEGSEARQSSDYPCLPKLEENQVEEKKGQIGEKEDQERGQEEEEEKKAKNGNEKDEFGAKLMEDSLQKLEESPKTAEFQNHDIEEFSGVQESQIGTSTSSDVSRKRSAADDFLPIGTEAKRIGIEISEEQANQLKNDIRRLSPVLVSLRERTLGEVSLTSESYLFGNDVDGRIISSCNDVPAESFVTNDSKIHDVDRNCEKQDIGEEKKETIVRIGVSSLECTSSANVGDTSNCASKKMDCDNEEEITTLDVASVVLSKGDDLDGTTESRQDDVRDTNVITNAESALCTPTKKCVVDTTIPSSPICRNLTVVLNRIEEKDIKKRNDQMDRDITENMWDYVVEESLPSNRRRDFVEEERDSVVESCESEEAQEKNAKKQRWQSDSSPITRSRKCELTENGTCSPDSGLVLKKCKVVLERIGEILGHSSQGENAEENGIISQEFEKDDESAPVAIIGKLEEDEEVVLASSSLTAEDSRASNELDSSETMPSSPEEAPEASIEVAEGVDTETETETGSDSSEVSPITSIRHELRDVDMAPDQLPCSEGVALCCVEAMAPIMTRLEAERPEAYTEDSAESLALATGARDEVRSDGSDSGLGNEIPGDSGPAPAPESDSETSFLDRLPDDILSDKEKGVNQLDSYAPSSGASGAPGQLPLTSFQTLPAKSNLKRRLTDCMEGDESRSNVDEPVKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERSCATNCVTETASSSEDPSDDTDEEPSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAIEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRPGFPCGCTRDGCANSTGRIEFNPVRVRTHFIHTLMRLELEKKQREEDGGGDHDQTDNQGQRDRSARPLRDIGSLGMETTVAGDACAIPGTGPGGGGGGFTTLHYETSHEGVGAGVVAGGCQPEVPGTREDSLDLYAIRDDCYASEDTVDSSQSGVVQRKLHPEFGQAFQSFSPGGQSGGTAGAGGGGGGGGGGSSGSSNGGGMSFQQSSYQDYGSPYAGLPSTSRVQFQPSPSQFQSPSNPAAFAHYGSYGGPQDAASTALQGCTGQVHQMPQPPPPPSTSQSQQQQQQQQQQQQQQQHSSYDATVFAQDDATSTTQYTNLTNSVQPMNATVVQQMQGKLEPFSELLSGRYSYYGEMHEPQQHHNTYGTHGTTGKIAEIIEPDQVTGEQQADSTVEDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -