Pbar001883.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pogonomyrmex barbatus
Gene Symbol
CAMTA2
Assembly
GCA_000187915.1
Location
NW:117728-166283[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-47 1.9e-43 146.2 2.5 2 116 200 312 199 312 0.98
2 2 0.93 9.9e+03 -4.5 2.4 26 37 480 491 461 534 0.62

Sequence Information

Coding Sequence
ATGAGGCAGGTAGTCGTGCTGGAGCCAGCAGGCAGCGTCCTGGTGATCAGACAGACCTCCCTGGGTGGCGGTGGCGTCGCCACCACTGGGAATGTCAACTCCAGCCCAACGGGCACCAACGACACCCACGCCTTGGTCAATCACGCCGCTGTCTCTACGATCGCCTCCAACGATCACAACCAGAACAGGATAGTCGTGGTGCGCTCGTCTACCTCATCCACCTGCATGACCAGCTCGGCCGACAATCATGCATCGACCAACGGCAATAGCAACATCAACGTTAACACGAACATTAATGGGAACTCGGGCAGCATCAGCTGCAAGCCGTCGTCGAAGGTCGGAATTGGCGGCGGTACCTGCAAGCTGAATGACAGGAACGATCACCTACGGAACGAGCACAAGAGCCAGGACGGAGTTAGCAACAGCAACGAGACGAACCCTGTCGCTGGATGTCGTCCAAGGGCGAGCAAGGAAGCCGCACATGAGAACGTTGCCTCCGACAGGAAGCCCGATGGCGCGGATCCCATCTCTCATGGCGATCCGATAAAGCTTCCCGAAAATCTGGAAACCTTGCCGCGAGCTGAACACTTTCCAACTCAGAGGCATCGATGGAACACCAACGAGgaAATCGCCGCCATCCTAATCAGTTTTCAGAGGCACGCCGAATGGCAAAGTCGGGAGGTAAAAGTACGACCACGAAGTGGTTCAATGTTACTGTACTCGAGGAAAAAAGTACGTTACCGGCGGGACGGTTATTGctggaagaaaagaaaagatggaAAGACTACACGGGAGGATCATATGAAACTAAAGGTTCAGGGAGTCGAGTGCATCTATGGCTGTTATGTGCACTCGGCGATCCTTCCGACGTTTCATCGGCGGTGTTACTGGCTACTGCAGAATCCGGACGTAGTTCTCGTCCATTATTTGAATGTCCCTTATCCGGATGGTGATGCGAAGCTGGCGGCCCTGCCACCCTGCCTCGCGCTGCCGCCAGACAAGAAGGAATGGACGCGAGACGAGTTAGCGTCGCAATTAAGGCCCATGTTCCTCGGTGGAGATGACGATCCGAACAATCCTCATCTCACGCAGCACTCAAACCATCCCGTCGACATGATAGTCTCTCAACTGCTCGATAGGCAAAGGGCATCCTCCACTTCCTCCACCAGTAATACTCAACTCGCACCTAGGAGACTTACGCCCGACAATCagGTCTCTTCGACAACGGGAGGTCAGCAAcagacgacgacggcggctcCGGCTCCCCGCGTTTATTCAAGACATTCCCATTCCACTCAGAGTCAACAGCCGGCTCCTTTAGTTTTAAGTTTGCAACAAATTCAAGGCGGTGGTGGTCTTCTGATACTTAACAGTCAACCATATCATcatcagcaacagcaacaacagcagcagcagcagcagcagcaacagcaacagtcgcaacaacagcagcaacagcagccgcaacagcagcagcagcaacagccgccgcaacagcagcagcaacagcaacagcagcagcaacagcaaagTCAGCAAGTGGAGATGCAACAAGTCACAGAACAACAAATCGTATCACAAACCAGCGTCGACCGCGAACAGCAAACGCAACAAGAGATTGACGCGCAGGAGAGTATGGAAAGATCTGCCGTACAATCATTGCCAATCGGCAGTTCTGGTTCCGAGGTGACCGATTTCGCGGAGACGCTGGATCTGAGTCAGGAAGACATTCAGAGGACACTATCGGCTAACATGGTGCCTCCGTCGCCGTCACCTTCGCCGGCAGACAACAGCATGATTAATCCGATGGATTTTATTGATTCGTCGGACGACGTGCTGGTCAATCTGGACGCGTTCGACGTGTTCGGTGATTTGCCAGAGCTGCATGATTTCGAAGCCGAACATACAAAGCACGAGGAACAGCGAGGTGCTCCCGAGAACGACGTCGGATGTCATCCTGGTACAACCGTCCATATTGCAGAATATAGTCCTGAGTGGAGTTACACCGAGGGTGGTGTAAAAGTATTAGTTGCTGGTCCATGGACCGGCGGTAGTGGTTCCCAATCATATTCGGTACTTTTCGATGCGGAACCGGTCGAAGCGTGCCTCGTGCAACCAGGCGTACTGCGTTGTCGATGTCCCGCGCACGCACCAGGAATAGCGTCCCTCCAGGTGGCCTGCGACGGTTTTGTCGTGTCCGATAGCGTTGCCTTCGAATATCGTAGAGCGCCGACGAGCGAACCTAGCCCAGAGAAAGCTCTGCTGGACCGTCTTGCGGACGTTGAGGCCCGTCTGCAGGGTCCCGGTCCACCTTCTCCCGCAGCTCATCTAGAAGAGCGACTGGTTGCTTATTGCCAGGATGCTGTTGTCCGTCCTTGGCGAGCCGGAGCAGAACCTCTTCAGTCCGGTGGGCCTACTCTCCTGCATCTGGCGGCCGGATTGGGATACTCCAGATTAGCCTGTGCACTCCTTCACTGGAGAGCAGAAAATCCTAGTAGCGTTTTGGATGCCGAGGTTGATGCTCTTAGGCAGGATAGCGCCGGCCTTACGCCACTTGCTTGGGCCTGCGCGGCGGGACATGCCGACACCGCCAGGATCCTTTACAGATGGAATGCTATGGCACTACGCGTGAGGGACTGTCAGAATAGAACGGCGACCGAGCTGGCCGCGGAGAACGGTCACACGGCGATCGCCGAAGAACTGAATCAGCTCGAAACCCGAAGGCAAGACGAGAGGCTTTTCTTGCGACCCGCCAGCCCTAGCCCCAGGCGGCCATCTCAAGACAGCGGTCTCGATCTGGCGTTGTGTGGCTCGCCGCTGCTGGATAACATGGAATTGTTGCAAGAGGATGAATCGTCGTTAGGCCTCAGCGAACAGGGAATGGAGAGCGTTTCGACCCCTCAGGAGACCGTAGGGGAGGAAGACGCGAGGGTGCTGACATTGGCAGAACAAATTATAGCGGCGCTACCGGAAAGGATTAAGAGGGCGGAGGGTGATTCTCCGTCTTCTTCCTCGCCACCACCACCCACAGCGCCTCTGTCACCCCTGGAAGATGCTCTCATGGAACAAATGCCTCTCGACTCTGGGGAATTATTTGACTCGTATCGCGACTGCAGCGGCGGCGCCGCTTCAGTTTCGGATGTCGATGCCGATGCCAGTCCCTCGAGTCCCTCCAGCAGTTGTCTGACACCCGATTCACCATCTCCGCCACCCACCACCGCCGATTTCTGTGAGTTTCTACAGCTGCAACTGCAGCTCGATGGCAATGGTAATGCTCACAGCGGCCAGTATTATTCGTCGAATGGCGGCGGCGAGCGCAAATTGAACGGCATGATTGGTTCCGGAGTCATGACAGCGACCGGAAATGGCAACGGAGACGGTAATGAAGCAGATCTTAGTAGACTGACGCTATCCGATCGCGAGCAGAGAGAGCTCTATCATGCCGCCAGGATGATTCAAAAGGCATATAGGAATTATAAGGGTCGTCAGAGGCAGGAAGAGGCTGAAAGGCACGCCGCCGTTCTGATCCAACAGTACTATCGCCGCCACAAACAGTACGCTTATCACAGGCAAGCCACGAAAGCGGCATTGGTGATTCAGAACAACTATCGAAATTATCGGGCGCGACCGGGCTCAGCCAGCGCGAGGCAGCAGGCGGTTCATCAACAGGCGGCTCATCAGGCAGCAAGAAAGATCCAGCAGTTCATGCGGCAGTCCAAAATCAAACTGCAGAACGCCAAGGCCGTCGCAAACGGGAGCGGGAGGCCGCCAGTGGTCACTTCGCGGGTGGCTGTTGTCCCCCAAAGCTCGCCCTCATCTAGCCCAGGGGCCAGCCTAGTAGCCGCCAGCCCGGGGGTCACCTAA
Protein Sequence
MRQVVVLEPAGSVLVIRQTSLGGGGVATTGNVNSSPTGTNDTHALVNHAAVSTIASNDHNQNRIVVVRSSTSSTCMTSSADNHASTNGNSNINVNTNINGNSGSISCKPSSKVGIGGGTCKLNDRNDHLRNEHKSQDGVSNSNETNPVAGCRPRASKEAAHENVASDRKPDGADPISHGDPIKLPENLETLPRAEHFPTQRHRWNTNEEIAAILISFQRHAEWQSREVKVRPRSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGVECIYGCYVHSAILPTFHRRCYWLLQNPDVVLVHYLNVPYPDGDAKLAALPPCLALPPDKKEWTRDELASQLRPMFLGGDDDPNNPHLTQHSNHPVDMIVSQLLDRQRASSTSSTSNTQLAPRRLTPDNQVSSTTGGQQQTTTAAPAPRVYSRHSHSTQSQQPAPLVLSLQQIQGGGGLLILNSQPYHHQQQQQQQQQQQQQQQQSQQQQQQQPQQQQQQQPPQQQQQQQQQQQQQSQQVEMQQVTEQQIVSQTSVDREQQTQQEIDAQESMERSAVQSLPIGSSGSEVTDFAETLDLSQEDIQRTLSANMVPPSPSPSPADNSMINPMDFIDSSDDVLVNLDAFDVFGDLPELHDFEAEHTKHEEQRGAPENDVGCHPGTTVHIAEYSPEWSYTEGGVKVLVAGPWTGGSGSQSYSVLFDAEPVEACLVQPGVLRCRCPAHAPGIASLQVACDGFVVSDSVAFEYRRAPTSEPSPEKALLDRLADVEARLQGPGPPSPAAHLEERLVAYCQDAVVRPWRAGAEPLQSGGPTLLHLAAGLGYSRLACALLHWRAENPSSVLDAEVDALRQDSAGLTPLAWACAAGHADTARILYRWNAMALRVRDCQNRTATELAAENGHTAIAEELNQLETRRQDERLFLRPASPSPRRPSQDSGLDLALCGSPLLDNMELLQEDESSLGLSEQGMESVSTPQETVGEEDARVLTLAEQIIAALPERIKRAEGDSPSSSSPPPPTAPLSPLEDALMEQMPLDSGELFDSYRDCSGGAASVSDVDADASPSSPSSSCLTPDSPSPPPTTADFCEFLQLQLQLDGNGNAHSGQYYSSNGGGERKLNGMIGSGVMTATGNGNGDGNEADLSRLTLSDREQRELYHAARMIQKAYRNYKGRQRQEEAERHAAVLIQQYYRRHKQYAYHRQATKAALVIQNNYRNYRARPGSASARQQAVHQQAAHQAARKIQQFMRQSKIKLQNAKAVANGSGRPPVVTSRVAVVPQSSPSSSPGASLVAASPGVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00393592;
90% Identity
iTF_01355300;
80% Identity
-