Pbar010523.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- ZNF541
- Assembly
- GCA_000187915.1
- Location
- NW:683561-779769[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6 3e+03 -2.3 0.2 29 42 1057 1070 1055 1071 0.88 2 2 9.7e-10 6.4e-07 28.7 0.0 2 46 1223 1267 1222 1267 0.96
Sequence Information
- Coding Sequence
- ATGTCGGGGGCGCGGAAGAAACGTTATGGGACGAGCGGAACGTCTTGGGCGTCGTCGCTGCAAAAAGTTCGTCGTAGAAAACGACTCTTGCTCGTCGTGCAATTCGCGATTAGTCGAGCAACATCGATTTGTCTCTCGATTCGTCGAACGTCGAGGCGTTACAGCAGTTTAACGGGTTCTATATCTCTGATTTCAGGTAGCAGCGAGGAGTCGAGGGCCGGTGGCGGTGATCCCGGGAAGCTGGGAGTGAAGAAATCGAGACTGAAGGCCTGCTCGCCGAACAGGCAGGGACCACAGCAGTGTCAGGTCTGCGGGAAGGTGTTCAACAACGCATCGGCGCTTACGAAGCACAAGCTGACGCACAGCGACGAGAGGAAGTACGTGTGCACGATGTGCGGCAAGGCGTTCAAACGGCAGGACCACTTGAACGGACACATGCTGACGCATCGAAATAAAAAGCCGTACGAGTGCAAGGCCGAGGGGTGCGGCAAGTCTTACTGCGACGCGAGGAGCCTGAGGAGGCACACAGAGAATCATCATGCCGGTAGCAAAATCAACGAGAGCATCAGTCCCAGCAGTCCCACGACCGGGCCTCACACGCCTAACACTCCTGGAAGCAATCCCAGCACACCAAGCACGCCCGGTGCAACTTCCACGACGAATGGTCACGGGCACGCGGCCTTGAAGCAACTTCTCGCCACTGAACCCGCGCAAACGCAACAGCAAAAGaatGCCACATCTCCCGGCGCCAGCAACGATGGCCTCACAAAACAGCAACTGGAGCTCATCCAGCAGCTCatgcagcaacaacagcaacaacaaacAACCacacagcagcagcagcagcaacagcagcaacagcaacggACTACTTCGCCAGCGGTGATACAAAAGGCACCAAAACCGTCCATCAAATCCACTGCGTCACCCGGCAATATTTCCAACAACTCCGCGAGTGGAAACACGACCAGTAATGCGAGATCGAGTCCAAAACCGAAGATGTGGAGTCACTCGCAGcagcagcagcaagcGCAACAGCAggcgcagcagcagcagcaacagcaacagcagcaacaacaacaacagcagcaggtCGGCTCACCGGGAAACGGAAATGTGGGAAAGAATAGTCCATCTCCCGGAAATTCATCTTCTCCCGGTACGGTTGTAACTTCCAATAAAACCCAAACGGAATCAAAACCGGTGGAATGCAACCTGTGCcatcgaaaatttaaaaacataccAGCCCTTAATGGTCATATGAGACTCCACGGTGGTTACTTCAAAAAgGACGCGGAGAACAAGAAAAGCGAGAAGAAAGAGGTCGTCGGACCGCCTCTGCAGACAGCATCCGTCAGTGTGAGAGCGCTTATCGAGGAAAAGATCATTCAAAAAAGAACAACAGCAGTGGATGCAAATGGCAATCAGCAGTTTCGAACGAATACCACCGTCTTCACCACGCAAGCCGACGCCGTCTCGCAAGCCATTGCTGGCAAGACGAACTTCGCGGTTCCGGCTCCACCGCCCTTGGCAGCGGGGGAAAAGGTGCGTCGGCTTTCCGATGGTGAACACTTCCGGCATCCCAATGTCACCGTGAGTGCCCATGCGATTGTGCAAAAGCAGTTGCAGGAAGCGAAAACTCAGGCTCAGGCGCAAGCGCTTGCGGATATGATTCTAAAGGGTGCGAAAGTGGCTGTAAAGAGAACAACGTCCGATCCGGGACAAAGATTACACTTGACTTACCAGCAGCCCGTGCAATCGGCGACGACCAACCAACAACCGAATAATCAACAGCCACAGGCACAACCTGCGGTAACGGAAAATTTCACAATGACTGGATACGCCGAGGATGGCGGTTACTTCAGCCCAAGCCTGCAGGACGAGGTGTTTCAGCAGGTCACAACGGTTCCTGAAAGCGTGCTCCTGCACACGTCCCAGCTGGACTCGATTCagTTTCAGACGGCCAGTCTGTTGCAAGAACAATCCACCGAACAGTTGCAGGATATCACGCTGGAGGACCGATATTCCTCGCAGCACACGGTCAATCCGGATCTTCAAGCATTGGTGAACTCACCACTGCCAGATTCTCTGGCCGAATTCAGTACTTATGCCGCGCAATACACAGAAAGTCCTCATACATTGCCAACCCAATCGCCTCTGCCATCGCCTTTAACGCGACACGATAGTCCAAGTTTCACGTATCCTACACCACCAGCCAGTCAGGAGGGTCTACTCACCGGAAGTCTGCCGTTGCTGAGTCCTCAGGAGGATCCGGAGAGCGTGAGGCATATGTCGTCGCCGCTCTCGGCAGCGTTTTATACCACTTCGATGTCGTCCGCCGCGGCCGTGGAGGAGGCACTGAACGAGGTGCTGCCGGGTGAATCCGAGGCGGACGCGGGTCTCTACGGGTCCGGTTCGCCTAATCCGCACTCGCCACTGCCAAGCCCATTGTCGGCGACGTCGGCGCCGTCGCCACTGCCGCCGTCCTCCGTCTCGTCGCCGGGAGCAATCACCTTCACCGGCACGAGCTTCCCCGTGTCACCGCATCACGCGCTTCAAAGCCAGATGATGCCGAACTCGGAGGATCCGCTACTCTCCTCGACCTCGAAGGACTTTGCCGTTTCTGGTCGCAGGCGATTCGAGTTTCAATCGTACAAACTAATCACGAGTCAGAATCTGATGGATCTTGGTCTCGGGAACGGTAGTCTCGCCGGCATCGTCGTCGACAACAACGGCGAGTTTAAACTAATACAGACGGCGAGTCTGCAGAAGGCAAATGTACTCGTACAGGCAGGCTCTCTCAGTCCCGCACTCACGTTCAAGAAAGAGATCCGTCTGGCAACACCAAAAAACGAGCCTGTGACCGTAAATCTCGGTCAGAACGTTCAAACGACAAATCAGCAACAGTGCAACGCAGAACAGTTCAATCAACAGCAAATCGTCAACCCGGCCAAGTTTTTTGTTCAAACTAATCATGCGGCAAAGAATAATATCTTGAGACAAAAATCGACTGCCGGAAATTTACCAATACCTATTGATCAGATCAAGCAGGAAATGTTAGACGAGGATGTGTTTCTCAGTCCTGGTAGTTTACCCACCAACAGTCCCGTGCGACACTGTCGGAAGAGGCCACGTATGGACGGTGACCAATATGTCAATAGTTCGCATTCTTATCCATCAAGGTTGCGAAAAGCTTGCGACCGCCATTGGGACAGTAGCTACACACCACCGCCGATCTTAGATCCGTCTCGTCCCGGTCCGGGATTATACGCGAGACTGCATCAACACGAGAGAGATTCGGACTTTAGTTCCGATGATTCTCAAGGGAACGACGGTCCACCGCCGAGAATCAACATCGGTACAAGATATCAAGCCACAATACCTCCAATAGAACACGATGGAGACAGAGGAAACGACGGGCCAGAAGCTGACCATCTTCTGTGGGATCCTGGCATAAACCATGTGCTTACAGACACTGAACTGGAGATGTACCTGCAGTTCGCGTGTTGTGCCGCGGTGCCAGGCGGTGGTAGAAACAAGGAGTATGCGCTTCATCTGTTACACATGTGCAAAGGGAATATCCATGAAGCGATGGTGAAATTGATGCGACCAACGCCTACACTACCAATGGAGCATCCACTGCTCAGTTACGAGTGCCACGAGTCCGACAGATGGACGTCACACGAAATGGACGCGTTCTATCAGGGACTGCTCAAGTACAACAAGGACTTTTCTGCGATTTCGCGAGACGTCGGTGCCAAGTCCGCGAAACAATGCGTGCAGTTCTACTATCTTTGGAAGAGGCTCTGTCCTGATGAGTACAAGAGGCTACGTATTTGTCATGGAAAAGTGAAAATCAAGAGCGAGATTAGAGATAGTAAGGATACCAAAGAACTACGCGATGCTATCGCGTCCGTGACAGAAATGGACTTCAGTGAAGACAAATCGATCCTTCATCGTACTCTGTTACAAACaaacgaaagagaaaattcaGCGACTCTGACTACCAGCGAAGGAGAGCTGAGGTTATTCGCATATGACTGCCCAGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCGCCCAAATCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGCGCCTACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAagTTTTCAACAAAGTGAAAAGCAGAAGTGCCCACATGAAATCTCACAGGCCAATACCCTTGCCCGATTCAACGGGTCAGGAATCTAAGCGATCCATGCAACAGTCATCAAAAACGCAACAATCAATGCTGTCGCAGCCAAgccaacagcaacagcagcagcaacagcagacGGACAATGCTACACCGCAAGCTCAAGACCATCAACAACAACTGTTGTCCGCGAGTATCAGTGACAGCAACACCAAAAATACAACACATTTATGTCACAATCCGACGAGACCCCCATAG
- Protein Sequence
- MSGARKKRYGTSGTSWASSLQKVRRRKRLLLVVQFAISRATSICLSIRRTSRRYSSLTGSISLISGSSEESRAGGGDPGKLGVKKSRLKACSPNRQGPQQCQVCGKVFNNASALTKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHAGSKINESISPSSPTTGPHTPNTPGSNPSTPSTPGATSTTNGHGHAALKQLLATEPAQTQQQKNATSPGASNDGLTKQQLELIQQLMQQQQQQQTTTQQQQQQQQQQQRTTSPAVIQKAPKPSIKSTASPGNISNNSASGNTTSNARSSPKPKMWSHSQQQQQAQQQAQQQQQQQQQQQQQQQQVGSPGNGNVGKNSPSPGNSSSPGTVVTSNKTQTESKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKSEKKEVVGPPLQTASVSVRALIEEKIIQKRTTAVDANGNQQFRTNTTVFTTQADAVSQAIAGKTNFAVPAPPPLAAGEKVRRLSDGEHFRHPNVTVSAHAIVQKQLQEAKTQAQAQALADMILKGAKVAVKRTTSDPGQRLHLTYQQPVQSATTNQQPNNQQPQAQPAVTENFTMTGYAEDGGYFSPSLQDEVFQQVTTVPESVLLHTSQLDSIQFQTASLLQEQSTEQLQDITLEDRYSSQHTVNPDLQALVNSPLPDSLAEFSTYAAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPESVRHMSSPLSAAFYTTSMSSAAAVEEALNEVLPGESEADAGLYGSGSPNPHSPLPSPLSATSAPSPLPPSSVSSPGAITFTGTSFPVSPHHALQSQMMPNSEDPLLSSTSKDFAVSGRRRFEFQSYKLITSQNLMDLGLGNGSLAGIVVDNNGEFKLIQTASLQKANVLVQAGSLSPALTFKKEIRLATPKNEPVTVNLGQNVQTTNQQQCNAEQFNQQQIVNPAKFFVQTNHAAKNNILRQKSTAGNLPIPIDQIKQEMLDEDVFLSPGSLPTNSPVRHCRKRPRMDGDQYVNSSHSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQHERDSDFSSDDSQGNDGPPPRINIGTRYQATIPPIEHDGDRGNDGPEADHLLWDPGINHVLTDTELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIHEAMVKLMRPTPTLPMEHPLLSYECHESDRWTSHEMDAFYQGLLKYNKDFSAISRDVGAKSAKQCVQFYYLWKRLCPDEYKRLRICHGKVKIKSEIRDSKDTKELRDAIASVTEMDFSEDKSILHRTLLQTNERENSATLTTSEGELRLFAYDCPDSFSGSVTVTMAGSTQTAQIGNTGHATVNTNSQTHTSSEQQLPAPTPLHYPCKICGKVFNKVKSRSAHMKSHRPIPLPDSTGQESKRSMQQSSKTQQSMLSQPSQQQQQQQQQTDNATPQAQDHQQQLLSASISDSNTKNTTHLCHNPTRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01122371;
- 90% Identity
- iTF_01355686;
- 80% Identity
- iTF_01228584;