Pbar010205.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- dnajc2
- Assembly
- GCA_000187915.1
- Location
- NW:5717-12535[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-05 0.061 12.7 0.0 3 31 444 476 442 489 0.87 2 2 5.9e-13 3.9e-10 38.9 0.0 3 44 563 608 561 610 0.92
Sequence Information
- Coding Sequence
- ATGACAGACGGCACCGGGAACGAGGACTCCGCCGCATTCAATTCCATATCCGATCCAAGCAAGACAAATACGTACAGCGGTACAGCGGGTGCAGTAGTTTTGTATTCAACCGCACAGGCATGGCGAGCCCAATTCCACCGAAGCCTCACATGCTCCAGCGTCTCAGAATCGTCggacgaagaagaagatctGTCTCAATATCAATTCGAGGATGATCTTGAATATCTTAGATCATTAGATCCAAGAGATTGGAAGGATCAGGACCATTATGCTGTTCTAGGCTTGAAAGATCTCAGGCACCGAGCAACCGAAGATCTCATTAAAAGAGCCTACAAGCTGAAGATATTAAAACATCATCCTGATAAGCGCAAGGCAATGGGCGAGGAAATCCGACCAGACGATGactattttacatgtataacTCGCGCCTGGGAAACCCTTGGGAATCAAGCAAAAAGACGAAGTTACGATAGCGTGGATCCTTGCTTCAATGATAATTTGCCGGACGAGAAGGATTGTCGGAACAATTTCTACGAGGTGTTGGGTAAAGCTTTCAAAGAGAATTCACGGTGGTCCGTGAAGAAACCCGTACCGCGACTGGGTGGACCACTGATGCCACGAGAGAAGGTAGAACAATTCTATTCATTCTGGTATGACTTCGACTCCTGGCGCGAGTATTCGTACCTCGACGAGGAAGACAAGGAGAGTGGTCAAGACCGGGACATGCGCAAGTGGATCGAGAAGAAGAACAAAGCGACGAGAGCGAAACGGAAAAAAGAGGAGATGGCGCGAATACGTACTTTAGTGGATATGGCTTACAATATAGATCCTAGGATAAAGAAATTCCAACAAGAAGATAAGGAAAAGAAGAATGCTGTAAAAAGAGCGAAGCAAGAAGCGGCAAAAGCCAGACAgcaggaagaagagagaatagCCCGGGATGCGGCAGAGAAGGAAagattagaaaaagagaaaagagaatccGAGGAGAGAGCAAAACAAGATGCGTTGAAGCAGGAGCGTGAGGCACAAAAGAAAGCGTTGCGCAAAGAGCGGAAGGCACTTAGAGATTTCTGCAAGGCAAACAATTACTTTGCTGAAAGCTCGGAAGAGAGTCTTCGACATATGGAGAGCGTAGAGAAAATCTGTGAACTGTTCAAGCTGATGCAGCTAGAAGAAGCAATGAAACAACTTCAGACCAATGGCAGAATCGCATTTTTGGGCATCGTCGAAGAAGCTGAACGGAGAATCGAGGCAGAACGCCGCGTGAATGTAATCAATAATGATGCGAGAAATATGCCCGATAAACAAACTAAAACTTGCACCGCACCCTGGAGTGAGAACGACTTGCAACTTTTGATAAAAGCGGTCAATCTATTTCCCGCCGGCACCAATCAACGTTGGGAAGTAGTAGCAAATTTCATCAATCAACACAGCAGTTCTACTAGCGGAGCTACGCGAGACGCCAAAGAAGTGTTGGCAAAGGCCAAGAGTTTACAATCAATCGACTTTAGTAAATCGAGTCTGAAAGAACAAGCGAATAAAAAAGCCTTCGACAATTTTATTGCCGAGAAAAAGAGCAAAGAAGCTATCGAGGAAAGAATGCCAGCTGTTACAGAGCGTCTGGATCATCCAATTGCGAACGGCGTCGCCGCTGAACCTAAGGAAACGAAAAAAGAATCGGCACCGTGGACGCCAGGTGAACAAAAACTCCTGGAGCAAGCGCTGAAAACTTATCCCACGACGGTCTCGGATAGATGGGATCAGATCGCAGCGTGTATACCCACTAGAACGAAAAAAGAATGCATGAAGCGATATAAGGAACTAGTCGAGCTCGTGAAAGCGAAGAAGGCGGCGCAGATgacgaaataa
- Protein Sequence
- MTDGTGNEDSAAFNSISDPSKTNTYSGTAGAVVLYSTAQAWRAQFHRSLTCSSVSESSDEEEDLSQYQFEDDLEYLRSLDPRDWKDQDHYAVLGLKDLRHRATEDLIKRAYKLKILKHHPDKRKAMGEEIRPDDDYFTCITRAWETLGNQAKRRSYDSVDPCFNDNLPDEKDCRNNFYEVLGKAFKENSRWSVKKPVPRLGGPLMPREKVEQFYSFWYDFDSWREYSYLDEEDKESGQDRDMRKWIEKKNKATRAKRKKEEMARIRTLVDMAYNIDPRIKKFQQEDKEKKNAVKRAKQEAAKARQQEEERIARDAAEKERLEKEKRESEERAKQDALKQEREAQKKALRKERKALRDFCKANNYFAESSEESLRHMESVEKICELFKLMQLEEAMKQLQTNGRIAFLGIVEEAERRIEAERRVNVINNDARNMPDKQTKTCTAPWSENDLQLLIKAVNLFPAGTNQRWEVVANFINQHSSSTSGATRDAKEVLAKAKSLQSIDFSKSSLKEQANKKAFDNFIAEKKSKEAIEERMPAVTERLDHPIANGVAAEPKETKKESAPWTPGEQKLLEQALKTYPTTVSDRWDQIAACIPTRTKKECMKRYKELVELVKAKKAAQMTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00733895;
- 90% Identity
- iTF_00128132;
- 80% Identity
- -