Pbar004137.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- Arid4b
- Assembly
- GCA_000187915.1
- Location
- NW:827905-838313[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-27 1.1e-23 82.8 0.1 1 89 308 395 308 395 0.94 2 2 0.14 2.1e+02 1.7 0.1 21 65 1380 1424 1359 1441 0.65
Sequence Information
- Coding Sequence
- ATGCTGGGAGACGATCCACCGTCCCTATCGGTGGGTACAGAAGTTAGCGCTAAGTATAAGGGTGCCTTCTGTGAAGCAAAAATTCGTAAAGTAGTACGATCAGTAAAATGTCGTGTAACTTATAAACCGCAAGGTTTAGGGACTGCTACAGTTGCTGATGATCAAATAAGAGGGACTTTAAGAGTAGGTGCTTCTGTTGAAGTTAAACATGTAGATCGAAAAGAACTTGTTGAAGctacaattacaaaaatccAAGACTGCAGCCAATATACTGTGGTTTTTGATGATGGAGATATCACGACATTAAGAAGAACTGCACTTTGCCTGAAGAGTGGGAGGCATTTTGCCGAAAGTGAAACATTGGATCAACTTCCATTGACTCACCCAGAACATTTTGGGAATCCTGTAATTGGGGGTAGGAGAGGTAGACGATCAAGGCAAGCACAGGATGAAAGCAGCGAAGATGAAGACAGTCCGCCACGAGGCACTCGTGATTCGGCTTCTAGCGGGGGTGCAAAAGAAGGAATGGAAACTGAACCAGAAATTGGTAGAGTGGTTTGTGTGGAACTCGGtgataagaagaaaaaggataaTTGGTTTCCAGGGCTAGTAGTTGCACCTACTGCTCAAGATACAGTAAGAATACGAGTGAGAGATGATTACTTAGTACGATCATTCAAAGATGCCAGATAttatacAGTACCCAAGAAAGAAGCTACAGAATTCACAAAGGAATTAGTtaataaagttgaaaatacTACTCTGAAAGTTGCAGTAGAAAAAgcgcttttatttttagagaaaaatgaaTTGCCACCTCATTGGGATAGGGATTCCTTGTTTGGTCATTCTGTTTCTAGTGGAAATAGCGATTATGATGGAGAACTTGACTCAGATAGTTCGGATGATGAACCGCGTGAGGAAAAAGATCATTTTGTGgctcaattatataaattcatggATGATCGCGGAACACCTATAAATGTTTGTCCTATGATTGGATCCGAAGATATAGATTTGTATCGACTTTTCCGAGCGGTTTATAAATTGGGTGGCTACAATCGTGTTACGAATCAAAATCAATGGAAAGCTGTGACACGACGACTTGGTTTTACAATGCAAAATTCGGTACCCTTGTATAATCTTGTAAAACAAGCTTATAAAAAGGTTTTACACTCCTTTGAGgatttttacagaaaattagGCTGCACCATGGTAAATCATCCGCGAGGTAGCATGCGTAAACAACGTCCTGGAAGAAGTCTTATTCGTGATAAAGATCGAAATACTCCTATACCACCGCCAGCACCAGCACAGGTGAAGAGTGATAAGGATGAAGACGAGAAAAAAGTTGTAGAGgatgagaaaaaagaaaagaaggagagTAAGAAGGAACAAGTGAAAGAAGaggaaattatcaaaataaagaagaaagaagaatctgAAGGAAATGCTAGCGGTCAGGAAAGCGATGTAAACGTGGAAGGAGATACCGAATCATCATCCAATAAtgaaaaatcacaaaaatcgTCTGCGCAAATTCCAACATTACCTCCCAATGTGAGTAGTAATACAGTTGCATCATCTGGCCGAACCAAATCAAAAAGTAAAGAAGATACTAAGAAAAAGGTAGCTGAGAAGAAGAAAACAGAAACCAAGAAGCAAGAAAAGAAGGATGATAAAatcaaagaagaagaagctaCTAAGACGAGATCTAAGGCAAAAGATGATATCGTGAAAAATAAAGGCGCTTCCGAAGGAAGGGAAACTCGGACTCCATCTAGGGAAGCAGATAAGAAAACAGTGTCTAAGCAGCGACGTTTAACGGatgaagaattaaagaaacgGGGAAGAAAACGCAAAGAGCATGAAACGGAAAAGTCACGCGCAGATGAACAACTCACAGAGACAGCTCCCAGTTACAAGGGTCCTGTGGAATGTGGTGACAAATTAAAAGTCTATTACGGCCCAACGCACGAATCCAAAGTTACTTACGAAGCAAAAGTCATTGAAATAGAAGAAGGTCCAGAACCATTGTATCTTGTACATTATACAGGTTGGAATACCAGATACGACGAATGGATTAAAGCACCCAGAATTGCTCAGAATATTACACAAGCTCAAGGTAGGGTAAAGCGCATCAAAGCAACTCCCAGACCTCAAACTCCCAGTACGAATTCGTCTAACAGTGTCAGTAGGTTAAAAAGTACTTGTAATTCGAGCATTAACGCATCGCAAAGTCGTCGCCGGGCACAAAGCGTTGCTCCTACTTCTACTAGCGCCGCTCAGTCAACTTTAACATCTACGAAGGAAACCAAGAAGGAAGACAAAGAGAAGGACAAGGAGACAATACAACCAACCAGGTCCACTACTCCGCTTTCTATCGCTAGTTCTAGTTCTAGAACCAAGAGTCCCGCCACGCCAGCTAATCGGCTAACCAGAACGACCAGAAATGTAGAGTTATCTGGAGTGGAATATCGTAGGCGCACAAGGAGAACCTCGGGACACACAGATCTATCTGTTGCATCGGAAAGCGAGGATAGTGAAGGATATGAATCTGACACTACCGAGCCTGAACAAACCAAGACCAGATTGAGaggaatagaagaaaaacgaaaggaAGCGCGAAGTAGAGcagaagagagaattaaaacGGACGATGTGACGATGAGCGATGGTGAGGATGATAAAGACAATTTGGATGAACCGCGTAAAGGTAGACGTTTGAGAAAAACGTCCGGCAAATCTCAAGGCATTAAATCCGAACCTGATAGTGATCAAGAGGAGCAACCAAAGGGTCGAGATTTTGATCTCAATCAAATACGATCTGAATTGAAAGGTTTTGACAAAGCTGTCAAATTAGAGATAGTCAGGGTGGAACCCGAGCCTGAAGACGAAATCAAGCAGGACGAAAAAGAGAACGTGGCTGCGATCACGATGTCACCCAAGGTGGAGAAAACTGTCGAATCTCCAAAAGTAGAAATTGTGGAGCCAAAAGTGGAAAGCACGgaagatatatatgaatttaaagaACCAGAACCATTTGAGTTCGAGGTAAGAAATAAGAGAGATAGTaacgataaagataaattaaagaagagaATGTTCGAAGACGAGGCAAAGAGTCCGAAGAAAAAGCAGAAAACACCAGCTACAGGATCTGTAACAAAGGAAACGAAATCGGAACCCCCAGAGAATGACTCTCGGAAGAAGCCGAGAAAATTGTTTGGTAAAAAATCTGATGATGCACACGAGGCACCAGTCATTGCTTCCAACAAATCATCCCATATCGCATCGTGCATGGCGTGTGAGGatgtttttaacaaattttgtgAATCATCTACATCATCCTCTGCATCATTCAATCAATTCAAATCGACTGTCACGGAAGAATCCGGTAATAAAGTAGTTGGTTTAAATCTCTTGTTCAACGATTTGCCAGCGGATGATGAAGCTACGCGCGATGATTCCGAGGATCGTCTAATAATATCGGAGACTGAGATATCGGAGATGGAACCAGAGAATGTATTTACCATGTATCAACAGGAGATTCAATTCCATAGCAGCAAATCGCCGAGTACAGCGGAATTAAGCAAGAACGAAGCAAACACTACGATTGAAAGTGTGAAGGACGAAGCGTCAATAACTAGTACGAGCAATAGTAATAAGCCTATTAACATCTCGGATCagaaacaaaatcaaattaaatcattaccAAGTCAAGCTGTGGCTGGACAATCGCAGTCAGAATTGAGGATGTTGGACTCCTCAAAGTTGCTCGATGTCACCCCGGTCCCACTGCCGATCGTGACTCCTCCAGCTCCCATAAGCGCGAGATTGCCAGCGACATCCAcgatagaagaaaaattatcagcTGCGATGGCATTTCGAAGCAAAGCTAAAGATACCAAAAAGATTACGGAGGAAGATACGCCTGATTTCGTACGCGTAATCAAGATAATCAAGGAATCTAAGAAAATAGACATTACTACTCCACAAAGAGGCAAAGATGCGGATTGCAGTATTCCTGCGACCGAAATAAACAAGAAACGCGAACAGGAAAAAATGTCAGTGAACGAAGAGAATCTACGCAGAGAGATCATGCGTGTAGCAGTTAaacgaaaggaagaagaaTTATCGAAGTTACCGAAGAAAGAGGTGGAATTGAAGAAGTTCTCAGAGACAAAAGCGATCACTGAACACAAAACCAAATTGCAGGAAGTCACTAGAGATGAAAACTGGAGGAGCGTCGGATACGAGATATCTGATAAAAAGCCCGAAGAGGAGTATAAAACAACGGatcagaaagaaaaagatagaattgAAAGTCATAAGAAACAAATCAACCAAGACATTACAGATTCTACAGATAGCAGCGATTCGGAATTAAGACTTGTGATAGACAATGAGGAGTTGCAAGACGTTAAAGTATCAACACCtaattacatgaaattatCAGCGGAATTAGATCATGTAGATAATACACAAGAGAGATACGCGAGGCCGCAAATAATGAAAACACAAAGTGTTCATcatcaacagcagcagcagcaacaacaacaacagcagcaacagcaggaGTGTATGGAGTTCAGGACTGATGTAGCATCTGTTACAAAAACAGACGAAGAAGGTGAAACGATGAATTCGCTGTTATGCGAAGAGGAAATACCTGGCTCACCGGCTCCATTGTCTGAGAGCATTGAACAAGCCAACATTGGTCCTTCGTGTAGTCCGCCGAAAAACGAAGCCACGGAGAGTAGTATAGCGTTGATGGAAATGCCTTTCGCAAGCGCACCGACTTCAAGTCAAAGTACGACGAGTAGCAATACTGTTGCTACTCTTAGTATGGCATTGCCAAAAACTGTAGAAGTATCAATACCAGTTCCGCTACCGATACAACAGAATGTATCTTTAAACATACGACAAtcacaacaacagcagcagcaacaccaacagcagcagcaacaacaacatgTATCAGCTTTGATGCCATCGCAACGACGAGAGAGCAACGAAGCCGCACCGGTAATGGACAATACGCCGCCGACTACACCCGATTCGAGTATTTCCAATATCTCAGGTTCGCCTAGAGAAGAGAGAACCGGTGTCTCATCGCCGACTTCAGAGGACAATATCAAACTCAATCGCGATAGCTCCGAAGCAGATAACGACAGCGCTGGCAAAGGCCCTGGTTTCAGCGAAGATGATACCTTGCCCAACTCTGAAAGTAACTCTGCGGATAGGATTCTCAAACCGCCTGCTAAACGCACAGTCGAGGACATGCAGTCACCCAAGAAACGCAAAAGAAGTAGAAAACATTCGGAATGTGGTACCGGCAGTGTCGTGCCAAAAAAACCCGGCAGGCAGAACGGCAGGAATGGCAGATTCGGAGCTGGGAGTGATAGCGATGACACCAGTGAGGGTTCCAATCTCTGTGTAATTAACAACACACCGACGAGTCATGCTAGCGCCATCACCAGTGTTCCCGATCTTAGTACCTATTCATCAAGATCACCAAGACcaacaaaatacaatttttatgtcGAATTAgATCCTGAATTGGATGGTAGTCAAAGGATAGCTGTATTACAGCAAAAGTTAACCGAATTACGAAAGACGTATAATGCCGTAAAAGTTGAACTCGCTGCTATAGAAAGACGTCGGAAGAAATTGAGAAGACGAGAACGAGAAGCGATGAAAGCAGCTAAAGCAGAAATGCAGCAAGCTTGTTCGTGA
- Protein Sequence
- MLGDDPPSLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKPQGLGTATVADDQIRGTLRVGASVEVKHVDRKELVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSEDEDSPPRGTRDSASSGGAKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENTTLKVAVEKALLFLEKNELPPHWDRDSLFGHSVSSGNSDYDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINVCPMIGSEDIDLYRLFRAVYKLGGYNRVTNQNQWKAVTRRLGFTMQNSVPLYNLVKQAYKKVLHSFEDFYRKLGCTMVNHPRGSMRKQRPGRSLIRDKDRNTPIPPPAPAQVKSDKDEDEKKVVEDEKKEKKESKKEQVKEEEIIKIKKKEESEGNASGQESDVNVEGDTESSSNNEKSQKSSAQIPTLPPNVSSNTVASSGRTKSKSKEDTKKKVAEKKKTETKKQEKKDDKIKEEEATKTRSKAKDDIVKNKGASEGRETRTPSREADKKTVSKQRRLTDEELKKRGRKRKEHETEKSRADEQLTETAPSYKGPVECGDKLKVYYGPTHESKVTYEAKVIEIEEGPEPLYLVHYTGWNTRYDEWIKAPRIAQNITQAQGRVKRIKATPRPQTPSTNSSNSVSRLKSTCNSSINASQSRRRAQSVAPTSTSAAQSTLTSTKETKKEDKEKDKETIQPTRSTTPLSIASSSSRTKSPATPANRLTRTTRNVELSGVEYRRRTRRTSGHTDLSVASESEDSEGYESDTTEPEQTKTRLRGIEEKRKEARSRAEERIKTDDVTMSDGEDDKDNLDEPRKGRRLRKTSGKSQGIKSEPDSDQEEQPKGRDFDLNQIRSELKGFDKAVKLEIVRVEPEPEDEIKQDEKENVAAITMSPKVEKTVESPKVEIVEPKVESTEDIYEFKEPEPFEFEVRNKRDSNDKDKLKKRMFEDEAKSPKKKQKTPATGSVTKETKSEPPENDSRKKPRKLFGKKSDDAHEAPVIASNKSSHIASCMACEDVFNKFCESSTSSSASFNQFKSTVTEESGNKVVGLNLLFNDLPADDEATRDDSEDRLIISETEISEMEPENVFTMYQQEIQFHSSKSPSTAELSKNEANTTIESVKDEASITSTSNSNKPINISDQKQNQIKSLPSQAVAGQSQSELRMLDSSKLLDVTPVPLPIVTPPAPISARLPATSTIEEKLSAAMAFRSKAKDTKKITEEDTPDFVRVIKIIKESKKIDITTPQRGKDADCSIPATEINKKREQEKMSVNEENLRREIMRVAVKRKEEELSKLPKKEVELKKFSETKAITEHKTKLQEVTRDENWRSVGYEISDKKPEEEYKTTDQKEKDRIESHKKQINQDITDSTDSSDSELRLVIDNEELQDVKVSTPNYMKLSAELDHVDNTQERYARPQIMKTQSVHHQQQQQQQQQQQQQQECMEFRTDVASVTKTDEEGETMNSLLCEEEIPGSPAPLSESIEQANIGPSCSPPKNEATESSIALMEMPFASAPTSSQSTTSSNTVATLSMALPKTVEVSIPVPLPIQQNVSLNIRQSQQQQQQHQQQQQQQHVSALMPSQRRESNEAAPVMDNTPPTTPDSSISNISGSPREERTGVSSPTSEDNIKLNRDSSEADNDSAGKGPGFSEDDTLPNSESNSADRILKPPAKRTVEDMQSPKKRKRSRKHSECGTGSVVPKKPGRQNGRNGRFGAGSDSDDTSEGSNLCVINNTPTSHASAITSVPDLSTYSSRSPRPTKYNFYVELDPELDGSQRIAVLQQKLTELRKTYNAVKVELAAIERRRKKLRRREREAMKAAKAEMQQACS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00128745;
- 90% Identity
- -
- 80% Identity
- -