Pbar001898.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- Atf2
- Assembly
- GCA_000187915.1
- Location
- NW:464843-469212[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7 1.9e+03 -1.8 0.1 53 63 247 257 242 271 0.59 2 2 5.8e-13 3e-10 39.2 6.7 2 65 289 352 288 352 0.94
Sequence Information
- Coding Sequence
- ATGACTGACtcagaaaaactttttgcTTGCTCCACATCGGGCTGCAATATGaGCTTTGCAAATGAGGATCAATTAACAATGCACAAAAAGAAACATGACATGATGTTAAATCTAAACAATAATTCTAAGAGTGCTGGATTTGTTGCAGATCAAACGCTGGAATTACGGATGATACATTGCATACTCCTCACATCTTTCCCTATATATCAGACGTACTGCCTGCAAATAGTCAAATTCTTTCCGAAGACAACGTTGAAGGACTGTCCTTCGACTGTATCTCTTGCTGAAAAAACTGCAGAGGAGGAAAATGTTATAAAGACCGATGAATGTAAcagtattaaattaagtaCAAACCAGACGCAAGAATTGATGAAAGATTCGAACGTTGTATCTGCTAAAGATGATACTCTTTCAACAGATATTATTGTCTCAAATACGAATGCAAACATAGGGCCTAAACTTTCGACGCAACCTACGTCTCATCTGTCCATCAACGGCGAAGAAGtgcaattgttattaaaaactgCAGATGGTAAATTAATGCAGCTGTGCGCAACACCGGTGTCTGAGCCTTCTAATGTATCGAATGTTAATACCGAACAGCAAACCGTTGTTATCAGAACCGAACCGGCTCTGCGGTGTGCAGTGAAATTGGAGCCCAAGAAGACTGTGAtctcaaaattatcattagcAAAAATGATGGAATACGATAAGCCGTGCCACATGACATCAATACGCTCGCGGCTCGAGAAATTGAAGCAGTCCTTGTCGAAGAGTGCGCAGAATCAGAAAGCGACCGAAGGATATGTGAAAACAGACGTGGCTGATGCTGTAAAGAAGGAAAGTGGCAAGAAAACAATTGATCAGATTAAGAAGAAAGACATTCTCGAGCGTAATCGTGCCAGTTCCATGCGTGCACGGGCCAAAAGAAAAGCGTGGATTCAAGAACTCCAAAGAACGGTAACCAACGTGAACGACACGAATACAGCCTTGCAGATGGAAGTGAAAGCTTTGCGCAAGGAAGTTGCAAAATTGAAGACTCTTTTATTGGCCCACAGAGATTGTCCAGTCACGAAAGCGATGCAGAAAGGAATAATTCTTGGACCTAAGATAATATCAGAAGATAATCCGGAAGTACTTACGGTACCGATATCAGCCAATGGTCCTGTAAAACGATTAGCCTCCTACATGGAGACGTCCAATGTATCGACGAAGAAATCGGTTCTGTCGATCACGAAGAATCCAGTGATACTCCCGAAGGTGGATTGTAATACCACGAATCTCGCGATTCCAAACGCGACGATTATAAAGACTTTACCGGCATTGAAAATCGTAGGtgttaatcaatttatatcggAAAAGTCAGAGGGAACGAAACAGATACTGATTGTACAAAATCAACCGAGAAAGTTGTGCGAAACCACACCCAGGCAAATTATTCAGATAAATCCGAATTACGAGGTGGAACATGCGGCATCTAAGAGCACAGGAACGTAA
- Protein Sequence
- MTDSEKLFACSTSGCNMSFANEDQLTMHKKKHDMMLNLNNNSKSAGFVADQTLELRMIHCILLTSFPIYQTYCLQIVKFFPKTTLKDCPSTVSLAEKTAEEENVIKTDECNSIKLSTNQTQELMKDSNVVSAKDDTLSTDIIVSNTNANIGPKLSTQPTSHLSINGEEVQLLLKTADGKLMQLCATPVSEPSNVSNVNTEQQTVVIRTEPALRCAVKLEPKKTVISKLSLAKMMEYDKPCHMTSIRSRLEKLKQSLSKSAQNQKATEGYVKTDVADAVKKESGKKTIDQIKKKDILERNRASSMRARAKRKAWIQELQRTVTNVNDTNTALQMEVKALRKEVAKLKTLLLAHRDCPVTKAMQKGIILGPKIISEDNPEVLTVPISANGPVKRLASYMETSNVSTKKSVLSITKNPVILPKVDCNTTNLAIPNATIIKTLPALKIVGVNQFISEKSEGTKQILIVQNQPRKLCETTPRQIIQINPNYEVEHAASKSTGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228774;
- 90% Identity
- -
- 80% Identity
- -