Pbar002742.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- nfil3
- Assembly
- GCA_000187915.1
- Location
- NW:280780-296253[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-14 3e-11 42.4 0.4 2 59 160 217 159 222 0.91 2 2 2.2 1.1e+03 -1.1 0.0 42 52 428 438 421 440 0.67
Sequence Information
- Coding Sequence
- ATGGTGGCAGAGTTTGTCGCCCGCCAAAGTGGATCGCCCATCAATGGTGAGACCGCGTGCCTGAACAGCAACATGCCGGCCACGCACACAATGGCGCACGGCGGCGGCCACGGCGCGCCCCACGGTGGGCCCCATGACGCCCATGGACCCCTCACGGTGCCCCTCACGCATCCCGGCCATCACGGCGGACCCCCGGCTGCGATCCAGCAGCAACATCAGCATCAGCCGCAGCAACAGCCCCCGCCGccgcaacagcagcaacagcagcagcccCAACCGCCgcatcaccatcaccaccaccaggCTCAGCAGccgcagcagcaacaacagcagcagcagcagcagcaacaacaacaacaacatcaTCATCATGACGCGTCGCAGACGCATCCTGAGAACTTTCCGCCCAACTTCGACATACGGAAGGAGCTGTTCTCGCAACGTAAGCAGCGCGAATTCATCCCCGATAACAAGAAGGACGACAGCTACTGGGACCGTCGCAGGCGCAACAACGAGGCGGCCAAGAGATCGCGCGAAAAGCGCCGTTTCAACGACATGGTCCTGGAACAACGGGTGATGGAACTCAGCAAGGAGAATCACATTCTCAAGGCACAGCTCGACGCGATACGCGACAAATTCGGGATCTGCGGCGAGTCCGTGATTAGCACGGAACATGTGCTAGCGGCGTTGCCCGCAGAGCCCACGATCAGCGTGAAACGCGCGAAGCTGCCGACGTCGGCGGCGCTTCTTTACGCGCGCACGCCGAGCCCGGTGCACACCTCGGTGATCCATCAGCCGGTGAGCGGCGCCCGTTCACCGAGATCACCGGCCTCGCAGCTCTACGTGCCCGAGACGACCGCTTACCCGGAGACCGAGAGCTTCCAGTATCCGTACTCGCACCCGGCGATGCATCACCTGGACACCACGAGCGCGCTGAACCTGTCGTCGCGCGGTCGCCGGGCGCAATCGCCGTTCGAGCTGTCCTCGGGCAGCGGCGACGAGGCCAGTCCTCAGATGGTCGTGGGATCCCAGAACAATCCGGCCGCCAATAACAGTCTGCCTCACAAGCTCAGGCATAAGTCGCGCATCGGCGACAAGGATGCCGCGAGCGCGCTCCTCGCGCTTCAGGGCATCAAGCAGGAACCCGGCCCGCGAGCGTCGCCGCCCTGGGACGAGGGCTCCAGCGACGAGCGTGACTCCGGCATATCGTTGGGCGCCGAATGGACCGGGCCGACCGTCACCGCGGTCTCGGAGAGCGATCGGGAGGTGAAGATGAAACTGGACCGCCTCGCGTCCGAAGTCGCGTCCCTGCAATCGATATTCCGCCTCAAACCCGCCGCAGCGGCGGCTGCGGCTGCGGCAGCGGACAGCTTGGTGACGGGTCACTCTGCCGCCACGGTCAGCGGACCGTGA
- Protein Sequence
- MVAEFVARQSGSPINGETACLNSNMPATHTMAHGGGHGAPHGGPHDAHGPLTVPLTHPGHHGGPPAAIQQQHQHQPQQQPPPPQQQQQQQPQPPHHHHHHQAQQPQQQQQQQQQQQQQQQHHHHDASQTHPENFPPNFDIRKELFSQRKQREFIPDNKKDDSYWDRRRRNNEAAKRSREKRRFNDMVLEQRVMELSKENHILKAQLDAIRDKFGICGESVISTEHVLAALPAEPTISVKRAKLPTSAALLYARTPSPVHTSVIHQPVSGARSPRSPASQLYVPETTAYPETESFQYPYSHPAMHHLDTTSALNLSSRGRRAQSPFELSSGSGDEASPQMVVGSQNNPAANNSLPHKLRHKSRIGDKDAASALLALQGIKQEPGPRASPPWDEGSSDERDSGISLGAEWTGPTVTAVSESDREVKMKLDRLASEVASLQSIFRLKPAAAAAAAAAADSLVTGHSAATVSGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126457;
- 90% Identity
- iTF_01421317; iTF_01423397; iTF_01421991; iTF_01406984; iTF_01405445; iTF_01408811; iTF_01407920; iTF_01406260; iTF_00129483; iTF_00127202; iTF_00125667; iTF_00127940; iTF_00128720; iTF_00126457; iTF_00385035; iTF_00765291; iTF_00884807; iTF_00417320; iTF_01523127; iTF_01477336; iTF_01475948; iTF_00015813; iTF_00181736; iTF_00016459; iTF_01476691; iTF_00014487; iTF_00181083; iTF_01261629; iTF_01519988; iTF_01355071;
- 80% Identity
- -