Pbar007732.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- Atf3
- Assembly
- GCA_000187915.1
- Location
- NW:346648-356373[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-16 4e-13 48.4 13.3 2 63 163 224 162 226 0.96
Sequence Information
- Coding Sequence
- ATGTACAATCTAAACGTGAATGTGAATCCCAGCCCGACCGGGACCGCGGGTCTTCTCGGTGtcacggcggcggcggccgaGGTCACGCCAAGGACACCGGAAATCGTAAATTCGCTGATCGCCATGACCAATCCCTTCGAGGGCTACGGCAGCGGCAACGAGAAGGGCATGCGGGATCGTACGGACTCGACCAGCAGTGGCGAACCAAGCCCACCTAGTGTCCAGCACACCTGTAGTCAGCTTATCAAGGAAGGGCTGAAGCTAACATTGCAGACGAAGAGGCGGGCGAATAGTAGTGGCGATGATGGcaagaaaaagacaaagaagGAGGATGGCAGCGGCGCCGACGACGAGGAAGAGGACGAGGcaagcaacaacaacaacaagaaTGGTGCTTCCTTTCAACATCTCATCGAAATCTCAAGGCCTCAACATCTCAAGATCTTCAAGACCTGCTTTTCACATCTCAAACTGACACCGGAGGATGAGGAGCGGCGTCGACGGCGGCGAGAACGTAACAAGATTGCGGCGACCAAGTGCCGACTGAAGAAACGTGAGAAAACGGTGATTCTCGTGCAGGAATCCGAAATCCTCGAGACCCAAAATCTCGACCTAAAGTCCCAGATACAGGAGTTGGAGACGCAGAGGCGCAGGCTTGTCGACATGCTGAGCCTTCACGGTCCGACCTGCCTAAAACAGGGTGTGGACACGACGTCGTATCAGCAGTTTGCCGAACCCCTTCAGCTGCCTAGCTACCAGGATAATTTTgtacagcaacaacaacaacctCCACCGGCACTGAACCAACCGCAAAACTGCGTCACCGATTATCCGGTAAAGGTTGAAGAGTACGAAACCGATTTCTACCGGCAGAGTAGTCCCTTCGTACCGACAACCTCGGACGCCGGTTGTACGGTTTAG
- Protein Sequence
- MYNLNVNVNPSPTGTAGLLGVTAAAAEVTPRTPEIVNSLIAMTNPFEGYGSGNEKGMRDRTDSTSSGEPSPPSVQHTCSQLIKEGLKLTLQTKRRANSSGDDGKKKTKKEDGSGADDEEEDEASNNNNKNGASFQHLIEISRPQHLKIFKTCFSHLKLTPEDEERRRRRRERNKIAATKCRLKKREKTVILVQESEILETQNLDLKSQIQELETQRRRLVDMLSLHGPTCLKQGVDTTSYQQFAEPLQLPSYQDNFVQQQQQPPPALNQPQNCVTDYPVKVEEYETDFYRQSSPFVPTTSDAGCTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015557;
- 90% Identity
- -
- 80% Identity
- -