Pbar007990.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- Atf6
- Assembly
- GCA_000187915.1
- Location
- NW:201380-205734[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-16 7.1e-14 50.8 10.7 2 61 362 421 361 424 0.95
Sequence Information
- Coding Sequence
- ATGCCAAGTATAGAATTTGGACAACGAAACAgcgataatattgcaatatcgGAGACACAAATGTTTCCAGAATTCGATATTTTAGAAGAAAGCAACCAATTCGTTCCTGATCATCTTTTCCAATCATGGGGTTCCGAATTAGGAATGCCTGTTTCACTGGAGAGAGATATCTCAGATTCTGATAATTCTTCAAGTGAAGCTATGAAAGATATATTCGACTTATTTACTATCAAGGAACTAGAATTTGATCATATACAAAATAGTTCAGAGCCAGGGAAAAcgattaagataaaaaatgaaattaaatttgaaccTGAAAGTCCAAATACACAATTTCCATTATCACCCAGTAATTTTTACCATTCAGAATCTAATGATTCAGACagacaaataaaatgttcaatGCAAGAAGTGTCAAATTGTgcgatacaaaatataaacaaagagtttaCTTTAGGAACATCACTAATTTCTTCTCCACACTATATATCTTCATCATCACAAACACCTCAatcatctttaaatatatcaggCATAACTCAGGATGTTAAATTCATACCTATTAATAAGCAAGATATAATGCAtaccaaatatattaaaaaaactgatTCTACGAAACATGTTCATATCCAACCCAAGAGTATCGCACAGCATACAAAAGATGgTAAACTTCAAAATACTATCTTTCTTCAAGATATTACTACATTTGCACAGAATGCAAATTCACAACATATATTGTATCCTTCAAAACTTCGAGTATTACCGGCACAAAAGCaacaaaattcattaaatatcaattctaataaaaaaacaaatactaCAACGTTTCAATTACCACAGAATGTGAAAATGATTAATACTATACCAAACATTTGTCCAACAAATACTACTGAATCAATAGATAATTCCACTTTTTTAAACAATGGatctatagaatataataatattgttgttaaCAATGAAACTTTGAATTATGCGCCATTTCAAGTAATacagaatgaaataaattccaaCTCATTATTAGTAAAAAACGAAGTAACTGATTTCAATTTGTCAAAAGATAATCAGGAATGTACATTGAAAGCACTAAAAAGACAAcaaagaatgataaaaaatagagaatctGCTTGTCTTTctcgaaagaagaaaaaagaatatgtatcgtctttagagaaagaaatatcggtattgaagaaagagaataaacaattaaaatcggaaaatataactttaaaacaGAGACTATCCGAAATGGaagacaatattataaatgacaataacaaatataaaaatgtcaattttaaacctttcttaaaaaagaaagtaaaaggAAGTGCTGTTGTTCTTTTTGGTATAATGTTTATGATAGCTTTCAACATTGATGGTTTTAGGAAAACGCTTCCACAAAATATACCTTTTAAAACTGAATCTGATAATTTGATAGTATCTATACCAGAAGATAGACACAACAGAAGATTATTCTGGGCCCTAGATGAGAACGATAACAATATAGAAGATGGaatcgaagaaaattttaataaaagtggTGTACCAATACATCAGCCAATATGTCCaatgtatattaatcaaaGTGAATCGATACGTTTAGATAGCGAGTTAAGACGCTGGATCGATGGTGAATCTGATCGAGATAATCGGACtgctttaagaaaaataaaattacagataAATTCGTTAAACGTATCATTGTTAAGATCGCCATTGGAAGAAAGAGCAAAACGAAAGTTGTATTTACCAcgagatagaaaaataaaattgcacaaaATGATCGATATTCCCACCGTTGATCAATATCCGGATAATAATGCAATTGAGATCTTCTCGCCGATATTGAGCGAACATGCTTCTTTATTTGAAGCTTTAGGAAGAAGAGACGATACATTTTATGTTGTTTGGTTTAGTGGCGAACATTTATTATTGCCAGCTTCCCGAAAAAATAACACAGCTAGACCTAAAATGTCTCTAGTTCTACCTGCTGTGTCTATAAACGGTACATTTTCAACACCACCTAATCATATAACAATGATGCAAATTGATTGTGAAGTAACCAATACGCAACTACTACATTTACAGCAATCTATCATACCAGTTCATTTACGAAATAGTAAACCTACAAATCAATCAAATCACTCTCATTCTGTTAAAGACATAGATAGTTCATCTACAGTTAATATCACTAGAAATTATAAACCGTACTTTTTAAAAGAAGTAAATCGGAAACATCGATATAGAAAACattttgtgtaa
- Protein Sequence
- MPSIEFGQRNSDNIAISETQMFPEFDILEESNQFVPDHLFQSWGSELGMPVSLERDISDSDNSSSEAMKDIFDLFTIKELEFDHIQNSSEPGKTIKIKNEIKFEPESPNTQFPLSPSNFYHSESNDSDRQIKCSMQEVSNCAIQNINKEFTLGTSLISSPHYISSSSQTPQSSLNISGITQDVKFIPINKQDIMHTKYIKKTDSTKHVHIQPKSIAQHTKDGKLQNTIFLQDITTFAQNANSQHILYPSKLRVLPAQKQQNSLNINSNKKTNTTTFQLPQNVKMINTIPNICPTNTTESIDNSTFLNNGSIEYNNIVVNNETLNYAPFQVIQNEINSNSLLVKNEVTDFNLSKDNQECTLKALKRQQRMIKNRESACLSRKKKKEYVSSLEKEISVLKKENKQLKSENITLKQRLSEMEDNIINDNNKYKNVNFKPFLKKKVKGSAVVLFGIMFMIAFNIDGFRKTLPQNIPFKTESDNLIVSIPEDRHNRRLFWALDENDNNIEDGIEENFNKSGVPIHQPICPMYINQSESIRLDSELRRWIDGESDRDNRTALRKIKLQINSLNVSLLRSPLEERAKRKLYLPRDRKIKLHKMIDIPTVDQYPDNNAIEIFSPILSEHASLFEALGRRDDTFYVVWFSGEHLLLPASRKNNTARPKMSLVLPAVSINGTFSTPPNHITMMQIDCEVTNTQLLHLQQSIIPVHLRNSKPTNQSNHSHSVKDIDSSSTVNITRNYKPYFLKEVNRKHRYRKHFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228762;
- 90% Identity
- iTF_01228762;
- 80% Identity
- -