Phis006841.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pogonocherus hispidulus
Gene Symbol
nfxl1
Assembly
GCA_963924545.1
Location
OZ004692.1:101704793-101714790[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 3 5.7e+04 -7.8 5.6 15 19 168 172 167 172 0.81
2 16 0.2 3.7e+03 -0.3 0.4 4 10 203 209 202 209 0.95
3 16 4.6e-08 0.00086 20.9 17.0 1 19 217 234 217 234 0.99
4 16 9.9e-08 0.0019 19.8 16.9 1 19 270 288 270 288 0.99
5 16 1.6e-08 0.0003 22.3 14.4 1 18 323 340 323 341 0.97
6 16 5.7e-05 1.1 11.0 9.1 1 18 376 393 376 394 0.92
7 16 0.45 8.5e+03 -1.5 0.5 1 4 403 406 403 407 0.89
8 16 8.4e-05 1.6 10.4 17.1 1 18 428 445 428 446 0.94
9 16 1.3e-10 2.5e-06 29.0 13.1 1 18 455 472 455 473 0.97
10 16 1.2 2.3e+04 -2.9 0.9 5 10 501 506 501 506 0.93
11 16 0.00012 2.2 10.0 5.7 9 19 521 531 519 531 0.90
12 16 0.0045 85 4.9 5.5 4 12 543 551 541 551 0.90
13 16 3 5.7e+04 -6.9 4.5 14 18 579 583 579 583 0.86
14 16 0.00049 9.3 8.0 4.6 1 12 620 631 614 633 0.81
15 16 2.5e-05 0.47 12.1 21.5 3 19 661 677 660 677 0.94
16 16 1.2e-06 0.023 16.3 11.7 1 16 720 734 720 740 0.93

Sequence Information

Coding Sequence
ATGAATAGTAGCTGTAAATCTACAAACCCTTGGAATAAGAATATTcaacagaaaaagaagaaggCCAATAGTGCAAATCCAATCAATCTCGAAAAGTCTTCACCGACACCTTCAGAAGTTAAATTTAAAGAAGCTCATTCTAAATTACAAGCTGCAGTTAAAAAACATGTGAAAGATTACGAGTCATCTTCGGAGGAGGAAGAATTAGAATCAAGTAATTTAATAGagggcattttgaaaaattataaaaatactggAGCAGAAAATGAAAATCTTGTTCGAACTCAAACTTTTATTGAGGAAGCTTTTGTTTCGGGAGCAGCTACTTGTCTGATCTGCATATCAAGAGTTAAGAGAGATGACTCAGTTTGGAGCTGTATAAGTTGTTATGCTTTTTTCCACATTATGTGCATTCAGAGATGGTCCAAAGATACAATAACTCAGCAGAAGCAAGCTTTGGAGGCTCCTGCATCACAAAAACAAACTAGAGTGTGCTGGTGTTGCCCAAAATGCCGCTATGAATACAAATCAGAAGACATTCCaaccaaatatttatgtttttgtaaaaaaactgaAAGTCCCAAGTTTCAGCCATTTTTAGTACCACATTCATGTggagaaatatgtaaaaaggaCTTAATACCAAATTGTGGACATAAATGTTTACTTCTTTGCCATCcggGTCCTTGTCCTCCTTGTCCAGTAACTGTAAGTGTTTCATGCTACTGCAGTGTTCAACCACCTAGAATTCAAAGATGTAGTAAAAAAGAATGGTCCTGTAACAATCTTTGTGGGAAAACTTTAACATGTGGAAAACATTCTTGCACTTATCCCTGCCATCCTGGAGAATGTAAACCCTGCCCTAAGAAAAGTATACAGAAATGTTTGTGCAAATCACAGCAAAAATTGCGAGACTGTGCTACCCCAACATGGCAATGTGATAAGATTTGCAACAAACCTTTAGAATGTGGGAGTCACAGATGCCAAGAAGTCTGTCATTCAGGAAATTGTGGTGGCTGTGTTTTAAATAAACCAAGGTCTTGTCCTTGTGGGAAAACATCATATCAGCTGCCCTGTACAGAAGACACTCCCACCTGTCTAGACACATGTGAAAAGCTCCTCGATTGTGACATACATAGATGCAACCAGAGATGTCACAAGGACAAGTGTGGAGTGTGTTTGGAAACGGTAGTAAAGGCATGCAGATGCGGACAACATTCGAAAGAAGTACAATGCTACAAACCATTTTTCTGTGagacaaaatgtaaaaatttgaaAGACTGCAACAAACATCCTTGTAATAGGAAGTGTTGTGATGGCAACTGCCCACCCTGTGAAAAACCTTGTGGTCGAACGCTAAGCTGTGGAAATCATAAATGCAATTCAGTTTGCCACAGGGGGCCTTGCTATCCATGCAATCAGACAGAAGATGTATTTTGCAGGTGCGGATCTACCAAAATTACAGTGCCTTGTGGACGTAAACATAAGACTAAACCACctaagtgtaataaaatttgttcAATACCACCTGACTGTCATCATGAAAAGAGAGAAAATCATAAATGTCACTTCGGAGACTGTCCACCATGTCGCCAGACATGTAAGAAGAACAGGTCGACCTGTCCGCATACATGTGATGCCCCATGCCACTCTGCTGTGCTTGTAAAGATCGAAGCGCAGAAGGCATCTATGCCCTGGGAACAAGCAAAACCACAAGTCGAGAGAAGAGCTTTACCATGTCCTGATTGTGTAATTCCGGTGCCTGTAACAtgtttagGTGAACATGAAACTTCGAACTGGCCTTGCTATTTAGGAAAACCTTCGAGCTGTTATTCTCCATGTGGGAGAATGCTTCCATGTGAAAATCACACCTGCAATTTACCATGCCATACAGTTGATGGGGCACCAGACAAGTTCcagGCTGGAACGAATTGTGAACAATGTGAGAATGAATGCACCAAGGAAAGACCAGAAGGATGCCAACATCCTTGTCCCAAACCTTGTCATCCCGGTCCATGCCCTCCCTGTAAGAATATGCTGCGTATAAAATGCCACTGTGGCCTTAATCTGCCTTACATCAGATGTAGCGATTGGATAAATCCAGACAAGAGAGAAGAATTGCAGAGTTGTGGCAACCAGTGCCCAAAAAATTTTGAATGTGGTCACAGATGTAAAGCCAACTGCCACCCGGGACCATGTCCAAACGCAGACCTATGCAAGAAGAAAGTTAAAGTTAGCTGTAAATGTAAAAGAATCAAGAAAGAATTTTCTTGTGAAAGTGTTCGTAAAAATATTGCAGTTATAGATTGTGATGAGGAATGCAAAAAGAAACAAGAagaagataaaaaaattaaagatgctCTGAATGAACAAAGGAATTTGGAAgaagaaatgaaaaataagagAGAACTGGAGAAATATCAGAAAATGTTTGAAGGCAAAAAGAAGAATAAACCGAGAAGAGTATATGAAGAAAAAGATGAGATCAGTTTTGTTAAAAAGTACTGGTTTGTTTTGTTATCTATTGTTCTTGCATTTATTGCATTAGTAATCTATTTTATACTTGGTTAA
Protein Sequence
MNSSCKSTNPWNKNIQQKKKKANSANPINLEKSSPTPSEVKFKEAHSKLQAAVKKHVKDYESSSEEEELESSNLIEGILKNYKNTGAENENLVRTQTFIEEAFVSGAATCLICISRVKRDDSVWSCISCYAFFHIMCIQRWSKDTITQQKQALEAPASQKQTRVCWCCPKCRYEYKSEDIPTKYLCFCKKTESPKFQPFLVPHSCGEICKKDLIPNCGHKCLLLCHPGPCPPCPVTVSVSCYCSVQPPRIQRCSKKEWSCNNLCGKTLTCGKHSCTYPCHPGECKPCPKKSIQKCLCKSQQKLRDCATPTWQCDKICNKPLECGSHRCQEVCHSGNCGGCVLNKPRSCPCGKTSYQLPCTEDTPTCLDTCEKLLDCDIHRCNQRCHKDKCGVCLETVVKACRCGQHSKEVQCYKPFFCETKCKNLKDCNKHPCNRKCCDGNCPPCEKPCGRTLSCGNHKCNSVCHRGPCYPCNQTEDVFCRCGSTKITVPCGRKHKTKPPKCNKICSIPPDCHHEKRENHKCHFGDCPPCRQTCKKNRSTCPHTCDAPCHSAVLVKIEAQKASMPWEQAKPQVERRALPCPDCVIPVPVTCLGEHETSNWPCYLGKPSSCYSPCGRMLPCENHTCNLPCHTVDGAPDKFQAGTNCEQCENECTKERPEGCQHPCPKPCHPGPCPPCKNMLRIKCHCGLNLPYIRCSDWINPDKREELQSCGNQCPKNFECGHRCKANCHPGPCPNADLCKKKVKVSCKCKRIKKEFSCESVRKNIAVIDCDEECKKKQEEDKKIKDALNEQRNLEEEMKNKRELEKYQKMFEGKKKNKPRRVYEEKDEISFVKKYWFVLLSIVLAFIALVIYFILG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01015498;
90% Identity
-
80% Identity
-