Phis018461.1
Basic Information
- Insect
- Pogonocherus hispidulus
- Gene Symbol
- gata5-a
- Assembly
- GCA_963924545.1
- Location
- OZ004694.1:58126717-58135371[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-18 1.6e-14 54.8 2.7 1 34 27 59 27 61 0.97 2 2 1.2e-18 1.1e-14 55.3 5.1 1 35 81 114 81 115 0.97
Sequence Information
- Coding Sequence
- atGTGCGCAATTACACAGCTTTCTATTTACAAACTAGTCGATCCACGCACCGCAGAATACTTCACAGAAGGTAGGGAATGTGTTAATTGCGGTGCTATTGACACCCCGCTGTGGAGAAGAGACGGCACTGGCCATTATCTTTGCAACGCGTGCGGACTCTACCACAAGATGAACGGCATGAATCGGCCTCTTGTCAAGCAGCCTCGTAGATTGTCTGCATCCCGTCGCGCTGGACTTACCTGCACTAATTGCCACACAAGCACAACTTCGTTGTGGAGGAGAAACTCTTTGGGAGAGCCCGTTTGTAATGCCTGTGGTCTCTACTACAAACTGCATTCAGTGAATAGGCCCTTGTCGATGAAAAAGGATAGCATACAGACAAGAAAGAGAAAGCCAAAGGGAAGCAAGGAAAGGAATTCTGATGGTAACCAAATGTCAAGAAACCTACAGAGTACGATTTCTGGTATAAAAATGGAGGATGTTGGAGTAAAGCTGGAACATACCTTagaaaactACAACGATCTAAGATCTGTGTCCAACCTAAACCACCTGCAACATACTTCAGCATCCAACTACGTCTTTAACAACCAGCCCCACCAAAGACTAAGCCCTTACTCTTCACAGTCGCCTCAACTGAGCACTCAATACTACGACTCAATTCTTCAGCACCCCAGTCCCAGCCCTCCTTCTACCACTCCAGAAAGTCCTTCTTCTCCCCATATtattaacaacaataacaacacaAAAGTAATTATTAACGGAGATCACAGTCTAGACAGACCAACTGTCGTTTCCTTATCCTCATaa
- Protein Sequence
- MCAITQLSIYKLVDPRTAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRAGLTCTNCHTSTTSLWRRNSLGEPVCNACGLYYKLHSVNRPLSMKKDSIQTRKRKPKGSKERNSDGNQMSRNLQSTISGIKMEDVGVKLEHTLENYNDLRSVSNLNHLQHTSASNYVFNNQPHQRLSPYSSQSPQLSTQYYDSILQHPSPSPPSTTPESPSSPHIINNNNNTKVIINGDHSLDRPTVVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01013916; iTF_01015487;
- 90% Identity
- -
- 80% Identity
- -