Phis018454.1
Basic Information
- Insect
- Pogonocherus hispidulus
- Gene Symbol
- pnr
- Assembly
- GCA_963924545.1
- Location
- OZ004694.1:57849901-57860978[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-18 1.4e-14 54.9 3.2 1 34 11 43 11 45 0.97 2 2 1.1e-19 1e-15 58.6 5.8 1 35 65 98 65 99 0.98
Sequence Information
- Coding Sequence
- ATGGATTTTCAGTTCGGCGAAGGCAGGGAGTGTGTAAATTGTGGGGCAATATCAACGCCGCTATGGAGACGAGACGGTACGGGACATTATTTGTGCAATGCTTGTGGGCTTTACCATAAAATGAATGGAATGAATAGACCACTAATTAAACCATCAAAAAGACTGACTGCAACAAGAAGATTGGGTCTCTGCTGTACGAACTGTGGGACCAGAACGACGACATTATGGAGGAGAAATAATGATGGGGAACCGGTATGTAATGCCTGTGGGTTATATTTCAAGTTGCATGGTGTAAATAGGCCCTTAGCCATGCGCAAGGATGGCATTCAGACACGCAAACGCAAACCAAAGAAGCCAGCGGGAGGAGACAGAGATGACAGTAGCTCCACCTCTGTAGAAGAATCAAAAACTCCTGCATTGGTACACCAATCAAGTCAACAACAGCATTCATCCCAGAACCATCAATCATCGTCACAAAATCATCAGACTCATCAATTAGATAAATCGTCACCAGTAGAAAGACCATATCTTGGTCAAACCTCCCTCTTACCTGCAACAAATACAAGTGCAATAAAAAGTGAACCCGGATATGAGTACAGCTGTATACAAAACCAACCGTCTTATCCATACCAGCAAATCTTCAGCTTTCCTAGCGGCACCTCGGGAAATGCAGAGATGGCTTACCACCATCAGCACCACGTTACAGCTGCAGCCAAACTGATGGCATCATCCTAA
- Protein Sequence
- MDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPAGGDRDDSSSTSVEESKTPALVHQSSQQQHSSQNHQSSSQNHQTHQLDKSSPVERPYLGQTSLLPATNTSAIKSEPGYEYSCIQNQPSYPYQQIFSFPSGTSGNAEMAYHHQHHVTAAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01311238; iTF_00722705; iTF_01370663; iTF_00026509; iTF_00756301; iTF_00328829; iTF_00330224; iTF_01047926; iTF_01122107;
- 90% Identity
- iTF_01370663;
- 80% Identity
- -