Basic Information

Insect: Pogonocherus hispidulus
Gene Symbol: ZNF711
Assembly: GCA_963924545.1
Location: OZ004697.1:42592850-42613551[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0001 0.01 17.8 1.7 1 23 40 62 40 62 0.99

2 16 4.9e-05 0.0049 18.8 2.7 1 23 68 90 68 90 0.98

3 16 0.00035 0.036 16.1 3.5 1 23 97 119 97 119 0.99

4 16 0.00017 0.017 17.1 4.2 1 23 125 147 125 148 0.96

5 16 0.00025 0.026 16.6 4.4 1 23 182 204 182 204 0.97

6 16 1.9 1.9e+02 4.4 0.3 5 23 264 282 253 282 0.84

7 16 0.17 17 7.7 0.3 3 23 293 314 291 314 0.94

8 16 3.2e-06 0.00033 22.5 2.0 1 23 343 365 343 365 0.99

9 16 9.3e-05 0.0094 18.0 0.4 1 23 371 393 371 393 0.93

10 16 7.5e-07 7.6e-05 24.5 0.5 1 23 399 421 399 421 0.99

11 16 0.009 0.91 11.7 0.3 1 23 427 449 427 449 0.94

12 16 3.6e-05 0.0036 19.3 3.6 1 23 455 477 455 477 0.98

13 16 2.2e-05 0.0023 19.9 0.5 1 23 483 505 483 505 0.97

14 16 0.013 1.3 11.2 3.6 1 23 511 533 511 533 0.98

15 16 1.3e-06 0.00014 23.7 1.1 1 23 539 561 539 561 0.96

16 16 0.023 2.3 10.4 0.2 1 17 567 583 567 584 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0001	0.01	17.8	1.7	1	23	40	62	40	62	0.99
2	16	4.9e-05	0.0049	18.8	2.7	1	23	68	90	68	90	0.98
3	16	0.00035	0.036	16.1	3.5	1	23	97	119	97	119	0.99
4	16	0.00017	0.017	17.1	4.2	1	23	125	147	125	148	0.96
5	16	0.00025	0.026	16.6	4.4	1	23	182	204	182	204	0.97
6	16	1.9	1.9e+02	4.4	0.3	5	23	264	282	253	282	0.84
7	16	0.17	17	7.7	0.3	3	23	293	314	291	314	0.94
8	16	3.2e-06	0.00033	22.5	2.0	1	23	343	365	343	365	0.99
9	16	9.3e-05	0.0094	18.0	0.4	1	23	371	393	371	393	0.93
10	16	7.5e-07	7.6e-05	24.5	0.5	1	23	399	421	399	421	0.99
11	16	0.009	0.91	11.7	0.3	1	23	427	449	427	449	0.94
12	16	3.6e-05	0.0036	19.3	3.6	1	23	455	477	455	477	0.98
13	16	2.2e-05	0.0023	19.9	0.5	1	23	483	505	483	505	0.97
14	16	0.013	1.3	11.2	3.6	1	23	511	533	511	533	0.98
15	16	1.3e-06	0.00014	23.7	1.1	1	23	539	561	539	561	0.96
16	16	0.023	2.3	10.4	0.2	1	17	567	583	567	584	0.94

Sequence Information

Coding Sequence: AtggaaattgaaaatgttataattaaatCTGAACAACCAGATGAAGATTTTTGCAATATAATTGAAGATGAAATCCAAATAAAAGATGAGGATCCACAGTCAACAAATGAAACACCTTATAAATGTGGTATATGTGGCCACCGAACAACTACAGATACCCTTCTGAAGGTGCACATGAAAATGCACTTGATTAAACGAGTGCATCAATGCAATATCTGTAAGAAGACCTTTAACTTTGTTACTGAATTAAACAGTCATATTCTAACACACACAGAAGAGAAAAATAGTTACCAATGTGAAGAATGCGGTAGAGACTGCTTCACAGAAGAAGACTTACATAAACATTATCGAGTGCACACAAAAGAAAAACCCTTTAAGTGTAAATTGTGTTTTAGGTCTTTTTCAGATGATTCCTATTTGAGAATCCATGAAAGATCGCACCATGGTGAAGACTATTTAAAACAGGTCATGAAGAAAGGTGGTACTTACGTTGACCCCAGTCTTGTCCGAAACTTGAATGAGGATAATAGTACACcaaaagCCCACCAATGTAACGTATGTCAGAAATGCTTCAGCAACGAAGAATTCTTAAAGCTACACATTGAGAATCATTTGAAGCAAGAAATGGCTCACGACGTATTTGGTACTGAAGATCCCCTTTCCAAAACCATAACTCAGATACCTTCAGATATCAGTGATAACTATTTAGAAAATTGCAGAACAACTGTGCCTGTGGAGGAAAAAGATCCGTCTAGTTTTGAATGCCAGTACTCCGATCAGAATGGCAAGAAATGTGTAAGGAGATTTGGAGAAAAGGAAGCATATGAGAACCACGTTAAGAACCATGACGATTTGAATATGGTGCAACAAATATTTTGTCACATGTGCAAAGCGAGAATAACAGATAATTTAGAGTTGTCTGCTCATATGATAAATGTGCATGGCATTTGTGACACATCTACATCAGgttTAGATGATAATATGACCCGTTGCAAGGAAACAGTTAAAGGCAAAGAAAAGACCGTCTTCAAGTGTACAATTTGTGCAAAACATTTTCCCGTTCCAAGTAAATTAAGGTCTCACATGCGGACACATACTGGTGAAAAGCCATTTAAATGTGAAGTTTGTAATAAATCTTTTGGTACTGCTGGCAGCTTAAAAGATCATGGTTATCTTCACACGAATGAAAGGCCTTTCAGGTGCACAATTTGCGAGAAAGGATTTACTAAAAACAGTGCTTTAGAGGACCACATTCGATCACACACTGGAGAGAGGCCCTACGAATGCAACATTTGCAAGAAAAGATATAGGACCATAGTAATCCTCAATCAGCATCTATTAGCCCATGCAAAAGAGAAGCCATTTAAGTGTGACGTGTGCAATAAGAGCTTTATTTACCTGTGCAACTTGAAGTATCACATGGTCACACATACTGGGACCAAACCGTTTTCCTGCAACTTGTGCGACAAAAGTTATGCTCTGAAAAGTGCTCTAAAAATGCATATGATGGACCATACAGGAGAGAAACCACATAAATGTCGATTCTGTGAAAAGCAATTCACTGCAGTGAATAGCCTGAAGAAGCATGAACGTGTGCACACCGGAGAGAAACCATACCTTTGCAATATTTGTAAGAAGGGTTTCAGCCAATCTAGTTCATTAAGTCGGCACATGGATTCCCATACAGGAGAAAAACCATATCGATGTACCATATGCCAGAAAGGGCTAACATCTTCTAGTTACTTGAAAGCGCCAACGATGGGGGGGCTGCTTTCTGCCTCGGGCGAGGCATCTGAAGCCTCCATTGGACTTGCTCCAACTCATGTCGTTACCCTCCTTAGCGATAACCTCACTGTTGTTTCACACAACCACTCCAATGCACTGTCCCTGAGTTGTCTTGGTACAGATAATTTTGTAGTGGGGCCTCCACTCCACTGTGTGACACTGCCTGGGCACTAA
Protein Sequence: MEIENVIIKSEQPDEDFCNIIEDEIQIKDEDPQSTNETPYKCGICGHRTTTDTLLKVHMKMHLIKRVHQCNICKKTFNFVTELNSHILTHTEEKNSYQCEECGRDCFTEEDLHKHYRVHTKEKPFKCKLCFRSFSDDSYLRIHERSHHGEDYLKQVMKKGGTYVDPSLVRNLNEDNSTPKAHQCNVCQKCFSNEEFLKLHIENHLKQEMAHDVFGTEDPLSKTITQIPSDISDNYLENCRTTVPVEEKDPSSFECQYSDQNGKKCVRRFGEKEAYENHVKNHDDLNMVQQIFCHMCKARITDNLELSAHMINVHGICDTSTSGLDDNMTRCKETVKGKEKTVFKCTICAKHFPVPSKLRSHMRTHTGEKPFKCEVCNKSFGTAGSLKDHGYLHTNERPFRCTICEKGFTKNSALEDHIRSHTGERPYECNICKKRYRTIVILNQHLLAHAKEKPFKCDVCNKSFIYLCNLKYHMVTHTGTKPFSCNLCDKSYALKSALKMHMMDHTGEKPHKCRFCEKQFTAVNSLKKHERVHTGEKPYLCNICKKGFSQSSSLSRHMDSHTGEKPYRCTICQKGLTSSSYLKAPTMGGLLSASGEASEASIGLAPTHVVTLLSDNLTVVSHNHSNALSLSCLGTDNFVVGPPLHCVTLPGH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -