Basic Information

Insect: Pogonocherus hispidulus
Gene Symbol: ZNF236
Assembly: GCA_963924545.1
Location: OZ004696.1:8441175-8453284[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.14 14 7.9 0.6 1 23 129 151 129 151 0.95

2 25 0.038 3.8 9.7 0.5 1 23 157 180 157 180 0.95

3 25 0.18 18 7.6 2.1 2 23 187 210 186 211 0.94

4 25 0.11 11 8.3 0.0 1 23 216 238 216 238 0.96

5 25 0.012 1.2 11.3 0.9 2 23 250 271 249 271 0.93

6 25 1.7e-05 0.0017 20.3 2.1 1 23 296 318 296 318 0.96

7 25 8.5e-06 0.00086 21.2 2.2 1 23 324 346 324 346 0.98

8 25 0.0022 0.22 13.6 0.1 1 23 352 375 352 375 0.96

9 25 0.23 23 7.3 2.0 1 23 386 409 386 409 0.95

10 25 5.6e-07 5.7e-05 24.9 1.9 1 23 503 525 503 525 0.98

11 25 0.0022 0.22 13.6 2.4 1 23 531 553 531 553 0.99

12 25 0.00043 0.043 15.9 0.7 1 23 559 581 559 581 0.99

13 25 5.7e-05 0.0058 18.6 3.3 1 23 661 683 661 683 0.97

14 25 2.2e-05 0.0023 19.9 1.2 1 23 689 711 689 711 0.97

15 25 1.5e-05 0.0016 20.4 0.4 1 23 717 739 717 739 0.97

16 25 0.29 29 7.0 2.4 1 23 745 768 745 768 0.84

17 25 0.0019 0.19 13.8 0.9 1 23 1087 1109 1087 1109 0.97

18 25 0.068 6.9 8.9 0.2 2 23 1116 1137 1115 1137 0.96

19 25 1.2e-05 0.0012 20.8 2.9 2 23 1147 1168 1147 1168 0.97

20 25 5.1e-05 0.0052 18.8 3.5 3 23 1176 1196 1174 1196 0.98

21 25 4.4e-05 0.0044 19.0 1.5 1 23 1203 1225 1203 1225 0.98

22 25 0.059 5.9 9.1 1.8 1 23 1231 1254 1231 1254 0.90

23 25 0.00037 0.037 16.1 1.6 2 23 1417 1439 1416 1439 0.96

24 25 0.0051 0.52 12.5 0.3 1 23 1445 1467 1445 1467 0.93

25 25 0.026 2.7 10.2 0.3 1 22 1473 1494 1473 1494 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.14	14	7.9	0.6	1	23	129	151	129	151	0.95
2	25	0.038	3.8	9.7	0.5	1	23	157	180	157	180	0.95
3	25	0.18	18	7.6	2.1	2	23	187	210	186	211	0.94
4	25	0.11	11	8.3	0.0	1	23	216	238	216	238	0.96
5	25	0.012	1.2	11.3	0.9	2	23	250	271	249	271	0.93
6	25	1.7e-05	0.0017	20.3	2.1	1	23	296	318	296	318	0.96
7	25	8.5e-06	0.00086	21.2	2.2	1	23	324	346	324	346	0.98
8	25	0.0022	0.22	13.6	0.1	1	23	352	375	352	375	0.96
9	25	0.23	23	7.3	2.0	1	23	386	409	386	409	0.95
10	25	5.6e-07	5.7e-05	24.9	1.9	1	23	503	525	503	525	0.98
11	25	0.0022	0.22	13.6	2.4	1	23	531	553	531	553	0.99
12	25	0.00043	0.043	15.9	0.7	1	23	559	581	559	581	0.99
13	25	5.7e-05	0.0058	18.6	3.3	1	23	661	683	661	683	0.97
14	25	2.2e-05	0.0023	19.9	1.2	1	23	689	711	689	711	0.97
15	25	1.5e-05	0.0016	20.4	0.4	1	23	717	739	717	739	0.97
16	25	0.29	29	7.0	2.4	1	23	745	768	745	768	0.84
17	25	0.0019	0.19	13.8	0.9	1	23	1087	1109	1087	1109	0.97
18	25	0.068	6.9	8.9	0.2	2	23	1116	1137	1115	1137	0.96
19	25	1.2e-05	0.0012	20.8	2.9	2	23	1147	1168	1147	1168	0.97
20	25	5.1e-05	0.0052	18.8	3.5	3	23	1176	1196	1174	1196	0.98
21	25	4.4e-05	0.0044	19.0	1.5	1	23	1203	1225	1203	1225	0.98
22	25	0.059	5.9	9.1	1.8	1	23	1231	1254	1231	1254	0.90
23	25	0.00037	0.037	16.1	1.6	2	23	1417	1439	1416	1439	0.96
24	25	0.0051	0.52	12.5	0.3	1	23	1445	1467	1445	1467	0.93
25	25	0.026	2.7	10.2	0.3	1	22	1473	1494	1473	1494	0.95

Sequence Information

Coding Sequence: ATGTTGACTGGTAATCAGTTAGTAACAACTATTAAAGAAAAAGAGGATTTAACCACATTTGTAGCCATACCTGTTGATTCACTGAAAAACCCTTCCGAACACAACAATTTGAGAGTggttcaaaacatttttattaaacaattagcAGATGGAACTATATGTTTAGCAGACACGTCTGAGGAGAAACAAAACTTGACTGAGGAACCATATTTGACTGAAACTGTGCcattaaaattagttaatgATCCTTTAGAGAAACCACCCATTAGAAATCGCACTATTTTGTTACATCCTCCAAGAAAGTTGGTTCATGATAAACCTTTGAATCTTACTCCAGAAAAGCCACCTTTGAAGAGATTAGAATCAAAACCAAAATATAATCCATACAAATGTATAAGCTGTGATAATTCCTTCGATACAATTGCGCAATACAACACTCACATGAAATGGCATAAGTGCCAAAAGAAATTCAAATGTGAAAAGTGTTCCTTAGGttataatattgaaaacaaCTTGAAGATTCATATGACTCTGACGCATTCTGAAGAAAGTAAGACGAAGTGCCCTGTTTGCCATGTCACTTTAACATTTCAAAGAGCAGCAAGCTTAAAGTCTCATTTAATGCTACATCATGTTGAGGAGTATTACACATGCGATGAGTGTGATGGAGAATTTGATAAAGAGgaTGTATTTATCAAACATATAGAAGCTCATACTGGGAAGAAACGAAACGATTCAAGACCTTTAACATGTTCTTACTGTAAACtagaatttaaagaatccaaagaATTTACGAGACATGTTGCAGATCACGTAAAGTTGAGGAAGGCTTTTTTGAAAAACAGGAGGCCGAGGAAACCAGGGGGTAAAAAGGAGGAATCTAAACATGCCTGCTTTATATGCAAAAAGAGTTTTATCAAGAATTCTCTACTTGAAAGGCACTTAAGGATTCATAGTGGGGAGAAGCCATATAAGTGTCAATTTTGTGATCGGAGCTTCACTCAAAAAGGTACTTTACAAATTCATCTAAGTAGGCATGCAGGCGTTAAACCTTATGCTTGTACCTTATGTCCTGCCAGATTCAATCAAAAAGGTAATTTGGGGGTTCACGTGCAAAAAACTCACACATTTCCAGCCGAAAATAAccaaaaaatgtacaaatgcTCTCAGTGCACctgcattttcaaaaaaatcgccACACTAAATGGTCACGTAACGAAAGCTCATTTAAATAGTAGGGACACCTCCAAACTGGATGACAGTCTTATCGAAGACGTCATATCTAAATTGAAAGAATTGGAAAAGCAAGCTTCTGGCAATATTTCTGACAAGTCTACTGAGAAGAACAAAGAAAATGAGCCGAAGGAGCATATTATCATTGAAAACAAAGCCGTTGAAGTGCctgattttgaaaaaaggaatttcatacatttaaCAGAGTCTGCCAATGACGGTACAGTCAGGAAATATTTGGTAAGACAAAAGAAAGTGGGCGATGTCCGATGGTACTTTTGTAATTATTGTTCGAAACAATTTAAGAAGCCTTCAGACTTGATCAGACACATGAGGGTACATACAAAGGAAAAACCTTTTAAGTGCCAACGATGTAATGCAGAATTCACCTTAAAATCAACTTTACTGTCTCACACCAAGACCCACACCAACAAATTGAACTACACCTGTAAAATATGTAACTCGTCCTTTATATCGCTTAGGGTATTAAACGCTCATCTCAGGAAACATGATTTTGAATCACTACCAAAGTGGCAGTGTATAACGTGCGGTTATTTATTTGACCAGTTGGAAGAGGGAGTTAAACACAGAGAGAAAATGGGCCGTGACAGACCGCATGTTGTACAGCCGTTCATAAATCACATTCTGAAGCAACCTTTGTACCAAACTACTTACGGTTCTTTAGCATTCAAGCCCCCAAAAACAAGGTTCCCTAATACAGGTTCCGAGTCGCCCACCCTTCGGCCATTCCACTGCACAATATGCGATGCAAGGTTTACTAGAAGAATTAATCTTAAAAGACACATTCAGTTCCACAACGGCGATAGGAATTTCAAATGTAATTTGTGCCCCAAGACATTTATTACATCATATGGACTAAAAGAGcatttaaattttcacaataatGTAAAGAACTATGCCTGCAAGCAATGTGATAAGAAATTTGTGACTGCTACACTTTTGAAGAGGCATGTTATCGTCCACAACAACCACAAGCCTTATCAGTGTCCTTATTGCGCAAAGACATTCAAGATGTTACTATTATGCAGGACCCATATAACTAAAGTACACAAGAAGGAAGTAGTTAAGAAGttaaattcgGAGCAGGAAGATCTTCTGGAAGGATCAGAATCTAGTAGTGCCCAGAAAGGAGATGTGGCAATAGATAGTTTGCAAGTTGTTCCAGAGAATGATGTTCTGCAAgaTTTGACAGGCACTTCTGATAACGAAAACATCGTAATTCAGCAGTTACTCCCAGAAGGTAGTAATTGTATTCAAATTATGAATGCAGATGACGCAATAGCAGACCTTAGTAACTACCCTACCATCTATGTTAATATGAATGATTTACAATTTCTTGATACGTCCAACTTAAATTTGACTAGTACTAGTGAAGCACAATTAAAACTTCAAAATGAAAACACAGATTCTCTACTAAATCAACAAGAAAATATGCAAGTCAAtgacataattttcaacatTGATCCCTTAAAACCTGGTTTAAGTTTGCCTCCTGAGGAAATTTTTGAGACTTCGCATGCTGGAACCACTGAGAACGAAGTTACGACCACGTTACAAAGTATAGCAGACATTTCTACAAAACCGATAAAACTTAATGACTTTTCTGGGGAGAATATCGGAGATAAATCGGAAAATTTAAACTCGCTTTTGAATAACAATTCAAATTTGTACTCAAACATCACCTTTAACAATTGCTTAAGTTTGCCCATAACTATGGAACAACAAAGCACTGTTGTGGATCCCACCTCCTCGAGTGATGTGTTTCAGTCAGCCTCTGCTGCGGATTTGAGTCACGTGGATAATATCTACGAAACAACAAACATAATGTGTATAAGTTGCAGCAGATTGTTTAGCAGCTTGGATGCCTTCCAAGGACACATCTGTACATCGTTAAATGAACCAACTGGCGACATTGATGATCAACAGCAACTTTCCAACGATCCAGCTTCTGATAGTGATAAAAGTGTAGAAGATGAAGACATAGACAAAACTGAACAGGAAAATTTCAGTTGTGCTGAgtgcaataaattattttccgaCAAGGAGTCTCTCGACTCTCACTTCAGTACTCATTCTGTTAAGTCAAATATCATGTGCAGTATATGCAAAACCGTCGTAAATGGTAGGACTCAGTATATCAAGCATTTGGCGACACACAAGGGTCCTAAAGGTGGATTTATGAGAAGCTGCAAATTTTGTTTCAAGGAGTTTAAGAAGCCTTCCGATTTAAAAAGGCATATTAGAACACATACTGGAGAAAGACCATTTGGCTGCCACTTTTGTGGAAAAAAATTTACTCTGAAATCAACGTTGGAATCCCATATAAAAACGCACGATTCTACACCCAAACAGTTCAGCTGCAATGTTTGCAATTCATTTTTCTCATCCAAATCTAGCCTTAAAGTCCACATGACCATACATACGGGTCAAAAACCGTACTCTTGTTCGTTTTGCGATCTAAAGTTCAGAACCGTGAGTAACAGAAAGTCTCATGAAACCCTTATGCACCTGTCTAAGTCAAAGAAAAGCGGAGAGAGCAAGCATAGCAGAGTGAAAAATATACTGGAATCCGTGGCGTCTGGAATAATTAGCAGTTTATCCGAAATCCAACCAAATCAAAATGGTTTAGTTCAAAGTGATGATAATATAGCAGACACGGAAAATACGTCTGCGaaAATTACCATTGACGACCATGAGCTCTCTTCTCAAGTGCTAAGCACAGAAAACTTACTATCTACGCTCCAGGACGATTCGATAGCAATGGACCCTGTCTTACTCCTCCAACAACTCCAAATGTCTGGCCTCATCCTCACCAACGAAAATAACGAGCCCGTCTCAACCCTTTTACTAGATGACGGGACAATCCTCAATGTCAACGGGACGAAAGACGCCATTCCCGAGCTGTCTTTGCAACCGACAGAACCACACGACACCATGGACATCACTTCTAGCAATAACAATGCCATGGTTAAACCTGAGAGAGTTAGAAACTTGGAGTGTGACATTTGCCACAAGATGTATGCCTCAAAGGATGTACTGAGGAAACACCGTAAGAAAGTACATGGGGTGAATAAGAAGTATCCCTGTATCAAGTGTGATAGGGCGTTTGACACGCAGGACGAGCTTAGTAAACATAATAAGTGGCATGCTGGGTACAAAGCCTTCTCGTGCATGTACTGCGCAAATAGTTTTACAGAAGAGTCTGGGTTGAAGATTCACATGAAAAGGTGA
Protein Sequence: MLTGNQLVTTIKEKEDLTTFVAIPVDSLKNPSEHNNLRVVQNIFIKQLADGTICLADTSEEKQNLTEEPYLTETVPLKLVNDPLEKPPIRNRTILLHPPRKLVHDKPLNLTPEKPPLKRLESKPKYNPYKCISCDNSFDTIAQYNTHMKWHKCQKKFKCEKCSLGYNIENNLKIHMTLTHSEESKTKCPVCHVTLTFQRAASLKSHLMLHHVEEYYTCDECDGEFDKEDVFIKHIEAHTGKKRNDSRPLTCSYCKLEFKESKEFTRHVADHVKLRKAFLKNRRPRKPGGKKEESKHACFICKKSFIKNSLLERHLRIHSGEKPYKCQFCDRSFTQKGTLQIHLSRHAGVKPYACTLCPARFNQKGNLGVHVQKTHTFPAENNQKMYKCSQCTCIFKKIATLNGHVTKAHLNSRDTSKLDDSLIEDVISKLKELEKQASGNISDKSTEKNKENEPKEHIIIENKAVEVPDFEKRNFIHLTESANDGTVRKYLVRQKKVGDVRWYFCNYCSKQFKKPSDLIRHMRVHTKEKPFKCQRCNAEFTLKSTLLSHTKTHTNKLNYTCKICNSSFISLRVLNAHLRKHDFESLPKWQCITCGYLFDQLEEGVKHREKMGRDRPHVVQPFINHILKQPLYQTTYGSLAFKPPKTRFPNTGSESPTLRPFHCTICDARFTRRINLKRHIQFHNGDRNFKCNLCPKTFITSYGLKEHLNFHNNVKNYACKQCDKKFVTATLLKRHVIVHNNHKPYQCPYCAKTFKMLLLCRTHITKVHKKEVVKKLNSEQEDLLEGSESSSAQKGDVAIDSLQVVPENDVLQDLTGTSDNENIVIQQLLPEGSNCIQIMNADDAIADLSNYPTIYVNMNDLQFLDTSNLNLTSTSEAQLKLQNENTDSLLNQQENMQVNDIIFNIDPLKPGLSLPPEEIFETSHAGTTENEVTTTLQSIADISTKPIKLNDFSGENIGDKSENLNSLLNNNSNLYSNITFNNCLSLPITMEQQSTVVDPTSSSDVFQSASAADLSHVDNIYETTNIMCISCSRLFSSLDAFQGHICTSLNEPTGDIDDQQQLSNDPASDSDKSVEDEDIDKTEQENFSCAECNKLFSDKESLDSHFSTHSVKSNIMCSICKTVVNGRTQYIKHLATHKGPKGGFMRSCKFCFKEFKKPSDLKRHIRTHTGERPFGCHFCGKKFTLKSTLESHIKTHDSTPKQFSCNVCNSFFSSKSSLKVHMTIHTGQKPYSCSFCDLKFRTVSNRKSHETLMHLSKSKKSGESKHSRVKNILESVASGIISSLSEIQPNQNGLVQSDDNIADTENTSAKITIDDHELSSQVLSTENLLSTLQDDSIAMDPVLLLQQLQMSGLILTNENNEPVSTLLLDDGTILNVNGTKDAIPELSLQPTEPHDTMDITSSNNNAMVKPERVRNLECDICHKMYASKDVLRKHRKKVHGVNKKYPCIKCDRAFDTQDELSKHNKWHAGYKAFSCMYCANSFTEESGLKIHMKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -