Basic Information

Transcription Factor Domain

TF Family: CSRNP_N
Domain: CSRNP_N domain
PFAM: PF16019
TF Group: Unclassified Structure
Description: This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.25 7e+03 -1.7 0.4 59 76 32 49 3 80 0.49

2 3 6.7e-14 1.9e-09 39.4 3.2 3 85 147 230 145 253 0.58

3 3 2.4e-17 6.8e-13 50.7 11.6 136 204 242 309 236 315 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.25	7e+03	-1.7	0.4	59	76	32	49	3	80	0.49
2	3	6.7e-14	1.9e-09	39.4	3.2	3	85	147	230	145	253	0.58
3	3	2.4e-17	6.8e-13	50.7	11.6	136	204	242	309	236	315	0.89

Coding Sequence: ATGGAAAATAAGCGTggtaaaaaatccaaaactaaTAAACCAAATGATCTTGATGGAAAAAAGTTTGTTAACGGGGAGTGTGAATCGGCAGATAAAAATATAGCTAAACATAAAATGGACGAAGATACCATCAAGGTACAGAAGGAAACTAAAACATCAGATGGCGGAAAAAGGTGCCTTAAGAAACAGAAAATTCAAACAGTAGTGCAATCATTACAAGTTGCCGGACCAAGCCGAATGGCCTCGCCTCAGAATTCAACGATCATTGAAAAAAGCGGGCCCATGATAGTATGCAAATACAAACTTCCTCCGCAAGTGAATCCAGAATCCACAAAACCCTTCGAGATCAAATGGGGCCAAAACTTTCTTAATACGCTTATACCTACAATCAAAACAACAAAAAGTATTATGAAAAGTCCATGTAAGGAAACCAAAGCAAAGCCACGCACGAGATTTTCGCAAGTCACCGTATACTATTTTGAGAGAACACAGTCATATTCCTCCAAACGCTCCAAAGGGGATAAAACTGTGGGCATGGAACAAGAACACTTTTATTCGAACCTATTGCCAGTAGACATGTATGAACATCAGAAAAAGAAACGGTATATCAAAAAACACACAGCTATGTGTTGCAAAGACTATATAAGAGAAGCTGGTCAATTTTCTCAACAGAAAAGCAATAATAAAAAGGCTGTACACTCTATCCAAGTACCAACAGAGCTTATGGATAAAGACGATAACCAAAGTATCGTTCAAAAACCTGAAAAAGGATGTTCTTGCAACGATTACTGTGACCCTGACATATGTAAATGTTATCTGAATGGCAAGCAATGTGAAGTCTATAAAGATAACTACCCATGCGGATGCAAAATGGAGTACTGCAAAAATCCAAACGGCAGAAAAGCTTATAATATTGGATATGTGAAACAAACCATTGCTACTTTTGAAGACGATGATAGTCCTGCTCCTGTTAGGGGAATAAAAAATGGTAGAATCCATAAAAGGAAGCAACCTGCTCCTACACGTTACAGAAAATATTAA
Protein Sequence: MENKRGKKSKTNKPNDLDGKKFVNGECESADKNIAKHKMDEDTIKVQKETKTSDGGKRCLKKQKIQTVVQSLQVAGPSRMASPQNSTIIEKSGPMIVCKYKLPPQVNPESTKPFEIKWGQNFLNTLIPTIKTTKSIMKSPCKETKAKPRTRFSQVTVYYFERTQSYSSKRSKGDKTVGMEQEHFYSNLLPVDMYEHQKKKRYIKKHTAMCCKDYIREAGQFSQQKSNNKKAVHSIQVPTELMDKDDNQSIVQKPEKGCSCNDYCDPDICKCYLNGKQCEVYKDNYPCGCKMEYCKNPNGRKAYNIGYVKQTIATFEDDDSPAPVRGIKNGRIHKRKQPAPTRYRKY

Sequence clustering based on sequence similarity using MMseqs2