Phis020227.1
Basic Information
- Insect
- Pogonocherus hispidulus
- Gene Symbol
- -
- Assembly
- GCA_963924545.1
- Location
- OZ004695.1:5578011-5580346[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00071 1.4 10.7 0.8 4 46 91 147 88 147 0.89 2 4 0.0041 8.3 8.2 0.3 1 45 214 272 214 273 0.75 3 4 0.00023 0.46 12.3 0.5 3 46 343 400 341 400 0.88 4 4 0.00053 1.1 11.1 0.9 2 45 486 542 485 543 0.89
Sequence Information
- Coding Sequence
- atggaaCCCTTGGAAATATACGATGCTATTAACAATAAAGTTATACGTGTATATGTGTCCACGGAGGTGGCTGAAAAATGTCGCACAGataCTGAATTTGCCcaagatttatttaataatttacaagatCAAAACATAGAAGAAGGCTGTGCAGTGGAAATAGAAACAATAAAGACTGAGGCTGAGGAAAATGAAGAAACTGAGCCCACTTTCACTGAACCTACAGATGGTGATGAATCTCCCATCGAAGAAAAAAGTGATAAAGAAATTTGGACACGACCTGACACATTaaagttgttaaaattataCCAAAAGTACAAAGACACTTTCAAGGAACACAAACAAAGGAAAGTAGTTTGGGCTATGATAGCAGCTGAATTATCTCAATATAATGTGTTCAAGTCGGCTGCAAAATGTGccgaaaaatggaaaaatttacTAAGAACGTACAAAGTTGCTAATGAAAAACCAAATACTCCAACAAGATTTCAATTCTTTCAAGAAATAaaggatatttttaataatactgaTGTATCAGTATCTGATAGTGAAGTGGACGAAAAAATGGGAGTAATTCACACCTCAGTGGATTCAGATTTGATGGAAGTAAGAGAAAATTTTTCAGAGGAAATTCAAGAAAAAGAATCCTGGTCAAGGTACGAAACACTTAAGTTTTTAAAGGCCTTTCAAAAGTTGAAACACATGAAATGCACCTTTTCAAAGGAGAAACATTTTTGGTCCATTGTTTCGGCCCAATTagctaaagaaaatatttataaacatcatGAAAAATGCTCTGCTAAATGGAAAAACCTTCTTCGTAGTTATAAGAAAAATTTGGAAAAGCCCAATATGCCGAAACGATTCCAGTATTTTCAGGAGGTTAACGATGTATTAAATGATAGTGAATTAGAGATTCCTGATCACATTATGCGCATTACAGATGATGTCGAAAAAATCGTAGACCCCGAGCagttcaaaagtattttagaaGAAGTAGAGTTAGAAAATGCCAAGGATCCTGTTTCCTGGGCGGCAGATGAAACGCTGAAGCTTATAGAAGTttacaaaaaacataaacaCAAGTTTAAGAATTACCCCACAAAGAAATACGTATGGGCTATTTTATCATCTGAACTTGCGAATCAGGGAGTCAATCGGAGTGCCGAAAAGCTAGAAAATAAATGGAAAAGCCTTCTGCGCTCCTATCGGAATGGCGAAATGAAAAAGGAATCGGCTCGATTTTATTTTTACGAGGAAATGGCTGAAGCGTTAACTATTGGTGAGAGCTGCACTGCCAAATACGATGCTGAATTCAAAGAATTTTTAGAGGATGAGAATTCAGTGGATGATACAGAAATGGCATTTGATAAGGCAGATCATTCGTATAGCGAAAATAATACGTATGAGCAGATAATCATCGAAACTGAGCCTAAAAGCGCTGAAGAGAATAAGAACCTATGGTCTTCTAGTGAAATTTCTGCTTTATTAAAATCATACGCTAATTGtaagaaaaaattcaaagagACAACAAAAATTAAGGTATGGGAGGAAGTTTCAAAAGAATTAGAGTCTGCCGGCATACAAAAATCACCAGAAAGTTGCGAGAAGAAGTGGAAAACAATGGTCAGTTTATATAAGATTCACAAGTTGAACCGAACAGGTCCTGGAAAGTTGCAGTTCTATAAAGAAATTGAAGACATTGTTAAAGATGAGTTCCCAGGCAGTAGCGACAGCGATGAAAATGTTATCCCTAGTAAAAGATGCAAATGCAGCGAAAAACGGATGCTTGAGAAGCAGGAAAGACATATAGAACGTATGCAAATGTTGAAGAGGAAATTAGATTTAGAAGAAAGGAAAGTTGAAGCTTTTGAACTCTATGTAAagcatttgaaaaataatagtagttag
- Protein Sequence
- MEPLEIYDAINNKVIRVYVSTEVAEKCRTDTEFAQDLFNNLQDQNIEEGCAVEIETIKTEAEENEETEPTFTEPTDGDESPIEEKSDKEIWTRPDTLKLLKLYQKYKDTFKEHKQRKVVWAMIAAELSQYNVFKSAAKCAEKWKNLLRTYKVANEKPNTPTRFQFFQEIKDIFNNTDVSVSDSEVDEKMGVIHTSVDSDLMEVRENFSEEIQEKESWSRYETLKFLKAFQKLKHMKCTFSKEKHFWSIVSAQLAKENIYKHHEKCSAKWKNLLRSYKKNLEKPNMPKRFQYFQEVNDVLNDSELEIPDHIMRITDDVEKIVDPEQFKSILEEVELENAKDPVSWAADETLKLIEVYKKHKHKFKNYPTKKYVWAILSSELANQGVNRSAEKLENKWKSLLRSYRNGEMKKESARFYFYEEMAEALTIGESCTAKYDAEFKEFLEDENSVDDTEMAFDKADHSYSENNTYEQIIIETEPKSAEENKNLWSSSEISALLKSYANCKKKFKETTKIKVWEEVSKELESAGIQKSPESCEKKWKTMVSLYKIHKLNRTGPGKLQFYKEIEDIVKDEFPGSSDSDENVIPSKRCKCSEKRMLEKQERHIERMQMLKRKLDLEERKVEAFELYVKHLKNNSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -