Phis041592.1
Basic Information
- Insect
- Pogonocherus hispidulus
- Gene Symbol
- rcor2
- Assembly
- GCA_963924545.1
- Location
- OZ004699.1:15213271-15223686[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2e-09 6.6e-06 27.8 0.0 3 46 131 174 129 174 0.97 2 3 3.4 7e+03 -1.1 0.8 36 44 271 279 271 280 0.88 3 3 3.9e-11 7.8e-08 33.9 0.0 3 46 378 421 376 421 0.95
Sequence Information
- Coding Sequence
- ATGGTGCTCGCTGaaaaaaataacgaaaatgcTAGGAATGGCAGAAGGAGCAGGGGGCCGAGTCCAAATGGTCACGTACAAGCAGAGTCCACAAGCGAGGACGAAAGCACTGTTCCTGTGGACAAAATTCGTGTAGGTCGTGATTATCAGGCAGTTTGCCCTGAATTACAACCAGAAAGCCAAAGGAAGCCAGAGCTTTTAGCTGACAGAGCACTTCTAGTATGGTCGCCCACGGAAACTATTCCTGAGTCAAAGTtgGAAGATTATATTGTATTAGCTAAAGACAAATATGGATATAATGGAGAACAGGCTCTTGGAATGTTATTTTGGCATAAGCATGATTTAGAGAGAGCGATGCTTGATCTCGCCAATTTCACACCATTCCCAGATGAATGGTCTGTTGAAGACAAAGTATTGTTTGAACAGGCATTCCAGTTTCATGGAAAGAGTTTTCATAGGATACGTCAGATGttACCTGATAAAAGTATTGCAAGTTTGGTAAAATACTACTACAGTTGGAAGAAGACGAGATCTCGCACAAGTCTTATGGACAAGCAAGCACGTAAGCTGAACACCCCTAAAGAAGAAGGAGCTGCATCAGAAGTAGGATCTGAAGCTGGTTCTAACGAAGAATCAGACCACGACGATAAGAAATGGACAATTCACCGTGGTATTCGACGTAAAAGCGGCTCTCCGAATCGTTCTGGGCCCCCCAGCGACGAGAACGCTTCCCAGGGTGAGGGTGGCGCGTGTTCTAACTGCGGAGTCATCTGTACTGTCACTCAGGTGACTGCCAAGGGGGCCCTCTGTAACTCCTGCTACCAACACTGGAGACGAACTGGGATGTTGAGACCCACTTCGGGGCCAACGGGTGGCAAGCGAGGTGCCCCCTTGGGGGCGCGTCATAAACGCAAGCCTCCCCGTGGCATGTACATCAACCACGACGACCTTGCAGCCATGGCATCGGGAAACACTGGCGTCGTCATGCTTAAAGCTATGGATCGAGAGTTAGATTCCCTACAGAGACAAAtacaacaaaacaaacaaaacatcaGTTCCTTGAAGCGCAAGCACTCTGATTCCATAGAAGACCTCCGTCCAGGAAATGGAAATAACTCTAAGCTCAACAGTCGTTGGACGAATGAGGAATTGTTGCTGGCCGTACAAGGAGTGCGTAAGTATGGAAAAGACTTCAAAAGCATTGCAGAGGTCATTGGTAACAAAAGTGCATGCCACGTCGGTGCCTTTTTTGTAAATTACCGCAAACGATACAATCTCGATAGCATTCTTAAAGAGTGGGAAAAAGACAATGGACCACTGCCAGAAGATAATCCAGAAGTTAAAAGCGAAAACGATGACAACAATGATAATGATGTTATTTGTCTGTCACCCACTCCCAGTTCAAAAAAAGAAGTTAAGAACGGAAAGGTGGCTCAGGTTGCAAAATGA
- Protein Sequence
- MVLAEKNNENARNGRRSRGPSPNGHVQAESTSEDESTVPVDKIRVGRDYQAVCPELQPESQRKPELLADRALLVWSPTETIPESKLEDYIVLAKDKYGYNGEQALGMLFWHKHDLERAMLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDKQARKLNTPKEEGAASEVGSEAGSNEESDHDDKKWTIHRGIRRKSGSPNRSGPPSDENASQGEGGACSNCGVICTVTQVTAKGALCNSCYQHWRRTGMLRPTSGPTGGKRGAPLGARHKRKPPRGMYINHDDLAAMASGNTGVVMLKAMDRELDSLQRQIQQNKQNISSLKRKHSDSIEDLRPGNGNNSKLNSRWTNEELLLAVQGVRKYGKDFKSIAEVIGNKSACHVGAFFVNYRKRYNLDSILKEWEKDNGPLPEDNPEVKSENDDNNDNDVICLSPTPSSKKEVKNGKVAQVAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01566170;
- 90% Identity
- iTF_00166046;
- 80% Identity
- -