Pcup023421.1
Basic Information
- Insect
- Poecilus cupreus
- Gene Symbol
- pnr
- Assembly
- GCA_963942605.1
- Location
- OZ012719.1:15320828-15343714[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.88 7e+03 -1.7 0.0 9 18 164 173 162 174 0.86 2 3 4.4e-18 3.5e-14 53.7 3.2 1 34 237 269 237 271 0.97 3 3 3.2e-19 2.5e-15 57.3 5.8 1 35 291 324 291 325 0.98
Sequence Information
- Coding Sequence
- ATGAGTGCCGCCCCAGGCGTCGGCGGTGGCGCCGTGATAAGATACAACCGCGGCTACCAGCAAAGCCACGCACCACGCATCAGCAATACAACATCACAGTCTCACCGCGGAGCACTAAGTGCTCCTGAGTGCCTCATGGTGCAGACGTGCAGCTCCATAGAGATTGTGTGTCATGACTACCATGAAGTCCGCAGTTCGATCTCCGCAGATGATATTGTCACCACTTTTAAATCTAGCACTTTAGTTTCCATTTCATTTTCATCTTTGGAGACACGATCTGACGATTCCACCATCGATGTAACACCGCCAACAATGTTCCACTCATCTCCAGCCACCAGCTACCCAGACACCAGCTACCCCCAGCACCTTCATCAACAGCCCCCAGTCTACGTGCCCTCCAGCCGAGCCGTTGGTGCCGTCGCCGTCCCAGGGCAGTACCCTGGAggaggcggcggcggcggtcaCTTCGGAGCCGCTCCTCCGCAAGCCACAGCCACGTGGCATGCCGACCCTGCAGGGTACGTCGGAGGGGGCGCTCATAGTCTAGCAGGGGTAGCAGGAAACCCTCACCATGGCGCACTAAGTGCTGGACAGTTCTACGCGCAGAATATGATGATGAGTGGGTGGAGGGCCTATGATGGGAGCGGATTCCAGAGGACGTCGCCGTATGACAGCGCAATGGACTTCCAATTCGGCGAGGGTCGCGAATGCGTGAACTGCGGCGCGATTTCGACGCCGCTGTGGCGACGCGACGGCACCGGCCACTACCTCTGCAACGCCTGTGGCCTCTACCACAAGATGAATGGCATGAACCGACCTCTCATCAAACCGTCCAAAAGACTGACCGCAACAAGACGACTCGGCCTCTGTTGCACAAACTGCGGCACCCGCACAACCACCCTCTGGCGGCGGAACAACGACGGCGAGCCCGTCTGCAACGCTTGCGGCCTCTACTTCAAGCTCCACGGTGTAAACCGACCTTTAGCGATGCGCAAAGACGGCATCCAAACAAGAAAACGAAAACCCAAGAAGCCGTCTGGCAGCAGCAACAGCAGCGGGGAAAGGGAGGAACACAGCTCCGCCCCCAGTGATGATACCAAATCCACCTCGGTTCATCACACCCAGTCAAACCAAGGCCATCAGCATTCGTCATCCTCCAACGTGGAAAGCACAAGTAAGCCATCGTCAGAGAGGCCTTACCTAGGGCAAACATCCCTCCTACCATCCACATCATCATCATCGACTTCTTCCTCGGGGATAAAAAGCGAGCCGGGGTACGAATCCATGGCTTCTTCGCAGTATAATTGTTTACAAGCTCACCAAGGATACTCCGCCTACCATCAGCAGATGTTCGGGTTCTCCGCGGGTCCACCCAGCGGCGCTGAAGTCGCGTATCATCATCAGCATCATGTGACAGCTGCCGCGAAATTAATGGCGTCTTCGTAG
- Protein Sequence
- MSAAPGVGGGAVIRYNRGYQQSHAPRISNTTSQSHRGALSAPECLMVQTCSSIEIVCHDYHEVRSSISADDIVTTFKSSTLVSISFSSLETRSDDSTIDVTPPTMFHSSPATSYPDTSYPQHLHQQPPVYVPSSRAVGAVAVPGQYPGGGGGGGHFGAAPPQATATWHADPAGYVGGGAHSLAGVAGNPHHGALSAGQFYAQNMMMSGWRAYDGSGFQRTSPYDSAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPSGSSNSSGEREEHSSAPSDDTKSTSVHHTQSNQGHQHSSSSNVESTSKPSSERPYLGQTSLLPSTSSSSTSSSGIKSEPGYESMASSQYNCLQAHQGYSAYHQQMFGFSAGPPSGAEVAYHHQHHVTAAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -