Basic Information

Insect: Poecilus cupreus
Gene Symbol: -
Assembly: GCA_963942605.1
Location: OZ012714.1:33018543-33022001[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.00071 0.14 14.3 0.7 3 23 201 222 200 222 0.97

2 21 0.075 14 7.9 0.1 2 21 310 329 309 330 0.92

3 21 0.74 1.4e+02 4.8 2.5 1 20 337 356 337 358 0.93

4 21 0.0038 0.73 12.0 2.2 1 23 381 404 381 404 0.97

5 21 0.44 84 5.5 0.1 3 21 413 431 412 432 0.93

6 21 9.6 1.8e+03 1.3 2.7 2 23 439 459 438 459 0.88

7 21 0.00077 0.15 14.2 2.1 1 23 496 518 496 518 0.98

8 21 2.3e-05 0.0044 19.0 1.9 1 23 524 546 524 546 0.98

9 21 0.0014 0.26 13.4 5.2 1 23 601 623 601 623 0.98

10 21 0.037 7.1 8.9 0.1 1 21 637 657 637 658 0.93

11 21 0.00081 0.15 14.1 0.1 3 23 687 707 686 707 0.97

12 21 0.015 2.9 10.1 0.1 2 23 718 739 717 739 0.97

13 21 0.028 5.4 9.2 0.9 2 23 758 779 757 779 0.97

14 21 0.0025 0.47 12.6 0.1 1 23 800 822 800 822 0.97

15 21 0.0025 0.48 12.5 4.2 1 21 830 850 830 853 0.95

16 21 0.019 3.5 9.8 5.4 1 23 869 891 869 891 0.99

17 21 0.058 11 8.3 0.0 1 21 900 920 900 921 0.96

18 21 1.4 2.7e+02 3.9 4.8 2 23 925 946 924 946 0.86

19 21 0.0055 1 11.5 0.8 1 23 955 977 955 977 0.98

20 21 0.015 2.9 10.1 3.1 1 23 981 1004 981 1004 0.93

21 21 8.1e-05 0.015 17.2 0.7 1 23 1044 1067 1044 1067 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.00071	0.14	14.3	0.7	3	23	201	222	200	222	0.97
2	21	0.075	14	7.9	0.1	2	21	310	329	309	330	0.92
3	21	0.74	1.4e+02	4.8	2.5	1	20	337	356	337	358	0.93
4	21	0.0038	0.73	12.0	2.2	1	23	381	404	381	404	0.97
5	21	0.44	84	5.5	0.1	3	21	413	431	412	432	0.93
6	21	9.6	1.8e+03	1.3	2.7	2	23	439	459	438	459	0.88
7	21	0.00077	0.15	14.2	2.1	1	23	496	518	496	518	0.98
8	21	2.3e-05	0.0044	19.0	1.9	1	23	524	546	524	546	0.98
9	21	0.0014	0.26	13.4	5.2	1	23	601	623	601	623	0.98
10	21	0.037	7.1	8.9	0.1	1	21	637	657	637	658	0.93
11	21	0.00081	0.15	14.1	0.1	3	23	687	707	686	707	0.97
12	21	0.015	2.9	10.1	0.1	2	23	718	739	717	739	0.97
13	21	0.028	5.4	9.2	0.9	2	23	758	779	757	779	0.97
14	21	0.0025	0.47	12.6	0.1	1	23	800	822	800	822	0.97
15	21	0.0025	0.48	12.5	4.2	1	21	830	850	830	853	0.95
16	21	0.019	3.5	9.8	5.4	1	23	869	891	869	891	0.99
17	21	0.058	11	8.3	0.0	1	21	900	920	900	921	0.96
18	21	1.4	2.7e+02	3.9	4.8	2	23	925	946	924	946	0.86
19	21	0.0055	1	11.5	0.8	1	23	955	977	955	977	0.98
20	21	0.015	2.9	10.1	3.1	1	23	981	1004	981	1004	0.93
21	21	8.1e-05	0.015	17.2	0.7	1	23	1044	1067	1044	1067	0.96

Sequence Information

Coding Sequence: atggAAATTGTGACCGCGCGAGCTAACAGTTTCAATTTAATGTGTCGTCTGTGTTTGTCTACAGACGACTATTTAATATCTGTTTTTGATGAAAATTATACCTTTTTACCACAAAGAATTGCAGCTTGTGTATCTGTCGAAgtACATGTGGATGATAATTTTCCATCAATAATATGCAAACCATGTTTTACAAAAGTAGATGAATggttcaattttaaaaaatgttgtgatgaCTCTCAAGCAAAATTGCGACAGTGGGCCAGTATTAATAGCATAATATGTAGCAAGGCTatgACTGTTCCAGTTAAAGATGATTTTCTACCGGATACAGATGATATACAGATAATAGAAAACGAAATAAGCAttattaaagaagaaattgtAGAAGACGATTATTTACCATCTGATACAGAAGAAACCCAAATTGATCCTTTTGCGCTTCAGCCATGTGATCCTCAAAATTCTTCAGCTTTTGAATTAACAGACTCATTATTAGTGCCTACTTACGAGTGTCCTGCCACCGTGCATGGGATGAATGCTCCCCCAATCACTGCTAACAACAGAGGTACTCAACATACAATATCatctttaacaaaaaattgcagAATATGTGAAAAAGAATTTAGTAATGCACAAAATCGTATTCGACATGAACGTACTGTGCATAACATAAACAGCATAAATTCATTTGTTGAAACTTCCTTAGACTCTCCGTCAATTTTTGACACagaaattacaaatattcaGTCATTAAATTCTGAAGATTCCAACAGTAATAATGCAGACGAATCCAGTGATGCTACTGTTGAAGAACTGGCAGCTGACTTACCAATAGAGCAAAGTTTTGCGGTTATTAATTCTATACCAAAGTCCGAAAGacattttattgtgtataacaaaatattaggTGAAATGATCGGTAAATTACGTTGTTATTTTTGTGGCATAAGTTACGCAAAATCCGACAGTATGCTGGCACATTTGTCAAAAATGTTAGCTATTGAAAAATTTACATGCTTTTTATGTTGTATTACATTTCCAAACCGTTCGCAATATATGAAACATGCAagcaaaaaattttgtaaacaacGAGCTCGTCTAATTAGGGATAAAAATTGTTCGTTTAAGGCATATCAGCATTACAAATGCACAATTTGCGAAGAAATTTATGTGCATAAGAAACATGTAGCCAGCCATTTGTTAAGTTCTCATTTGCAGCCCAATTTTCCCCCTTCGTGCGATCGATGTGCTAAACCCTTTGAAAGTTTAAACGAATATAAGATGCATCTACAAGACTcttgtttttatcaaatttacTGCAGTATTTGTAAAATATCTTGCAGTCCTGAAGAATTTACTGAGCACTGTAAAATTCACGAGGATAATaatttggaatttaattttgacGATTACGTTAACAAAAAAAATGATTGTAGAAACAGATTACCAAAACCattgaatgaaaattatacgagatctaataaatattcttgtagtAGATGTGGTACACAATTTTCCACTCTAGACATGTGGTGTGAACATCAAAAGATTCATTCTGGTAATGATGTTTTCCGATGCACCGATTGTAACAGAGTTTTCGTTACAGAACATGAGTTAGAAGACCATAAAAGCACCCATGCTAATAATAACATTAAGTTAAAACTATATCGTTGTTCAAATACAAACTCTTACAAAGCAGTTTCTGAATTCTCGTCATCTTCTAATTCTCCACAGTTAGAACAAAACATGGAAGATGAACGCGATCCGCGAGAAGGAGAAAAATCGAAAGAAGAGAAGAAATTTATATGTACCACTTGTAAACGATGTTATAATACAGCAAAAAAGCTACAATCACACAAAAGAGTTCATCGTGATACAcactataaaacaaataaatggaaGAGAAAATTCAATTGCCCAAAATGTAATAGAGGGTATGGAAGTTCAGCTACTCTTGGGGCTCACAAAAAACTATGCTTAGGCAAAATTGTAAATCCTACAACTGTAGTAAATATCAAAAAAGAGTATTCTGAAGTAAAAGCACCAGAGGGAAATATCTGCCAAGTTTGTAACAAATCGTTTCCGACTGAAAGAGGCCTTGTGGCCCATTCTAAAATACACACATCCAGGGAAAATGATGCCGAAACAACGCAGTGTCAAGTATGTAATGGTAAATTCGTAAACGTCGAAGCACTGCTTGATCACTTGAAATCTCATTCAACGAAAAGTTTAAGCACTATTTTACATATCGACAAACACGACGAAAAATCGGTATGTCAGATTTgtaacaaaatatgtttaacCAAAGCCGGATTAATAAGTCACTTAAAATCACATAATGCTACTCTAGCAAGTccacaaatgaaaataaaaactgaaccTGCGTCAGATACAACATTCAATTGCAACTTTTGCGGTATGGAATTTGAAAGTCGTGCTGCTTTGAATCctcatattaaaatacatttgaaCGGGGCAAGTATAGCGTATAACTGTACTCTCTGCCCTAAAGTCTGCACAAATAGTTATCAGTTAGCTAATCATGTCAGATGTAGACACTCAAATGAATCTACCAATGTTAAAATTAAGCAGGAAGTACCGAATTATCGTTGCCATATTTGCAAAAAGAATTGTCTAAGTAATGCTGTTCTGCAAAGGCATCTTAAAACTCACGCAAAAGCAACAGTCAATAAGAAATTCAAATGTAATTCTTGTTTAAAGATCTTACCTTCTGCTGTAGCTCTTCAGCGTCATCTCAAAGGGAATTGTTTACATTGCACAAAgtgtaacaaaaaatttacatcCATGCAAGCGCATACCGCCCATAAAAACTGGCATTTGCGGCAGAAAAGCAATTCACTTTTTAATTGTAACCAGTGTCAGGCAGAATTTGATGTACAAAAGGATTacgtaaaacatttaaaatctcaCAAAAAGACATTTAAATGTAAGTTATGTCCAAAAGCTTTTCACTACATGAAATCTTTATTAACTCATACAACTTACGCTCATGGAAGCGATGGTTTAACTCCGAAAACCTCTGTTAAAAATCCggttagttttaaaaatagtattaaagtTAAACGCGAAGTAAAAACTGAGGTAAAACAAGTACAACCACCACCTATGTACAGGTGTACAGAATGTAATACAACCTTTGTAAATTCTAAACGGTTGAGGATTCATGTTTTGTCAGCGCACATGGCTGGTGACATGTAA
Protein Sequence: MEIVTARANSFNLMCRLCLSTDDYLISVFDENYTFLPQRIAACVSVEVHVDDNFPSIICKPCFTKVDEWFNFKKCCDDSQAKLRQWASINSIICSKAMTVPVKDDFLPDTDDIQIIENEISIIKEEIVEDDYLPSDTEETQIDPFALQPCDPQNSSAFELTDSLLVPTYECPATVHGMNAPPITANNRGTQHTISSLTKNCRICEKEFSNAQNRIRHERTVHNINSINSFVETSLDSPSIFDTEITNIQSLNSEDSNSNNADESSDATVEELAADLPIEQSFAVINSIPKSERHFIVYNKILGEMIGKLRCYFCGISYAKSDSMLAHLSKMLAIEKFTCFLCCITFPNRSQYMKHASKKFCKQRARLIRDKNCSFKAYQHYKCTICEEIYVHKKHVASHLLSSHLQPNFPPSCDRCAKPFESLNEYKMHLQDSCFYQIYCSICKISCSPEEFTEHCKIHEDNNLEFNFDDYVNKKNDCRNRLPKPLNENYTRSNKYSCSRCGTQFSTLDMWCEHQKIHSGNDVFRCTDCNRVFVTEHELEDHKSTHANNNIKLKLYRCSNTNSYKAVSEFSSSSNSPQLEQNMEDERDPREGEKSKEEKKFICTTCKRCYNTAKKLQSHKRVHRDTHYKTNKWKRKFNCPKCNRGYGSSATLGAHKKLCLGKIVNPTTVVNIKKEYSEVKAPEGNICQVCNKSFPTERGLVAHSKIHTSRENDAETTQCQVCNGKFVNVEALLDHLKSHSTKSLSTILHIDKHDEKSVCQICNKICLTKAGLISHLKSHNATLASPQMKIKTEPASDTTFNCNFCGMEFESRAALNPHIKIHLNGASIAYNCTLCPKVCTNSYQLANHVRCRHSNESTNVKIKQEVPNYRCHICKKNCLSNAVLQRHLKTHAKATVNKKFKCNSCLKILPSAVALQRHLKGNCLHCTKCNKKFTSMQAHTAHKNWHLRQKSNSLFNCNQCQAEFDVQKDYVKHLKSHKKTFKCKLCPKAFHYMKSLLTHTTYAHGSDGLTPKTSVKNPVSFKNSIKVKREVKTEVKQVQPPPMYRCTECNTTFVNSKRLRIHVLSAHMAGDM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -