Basic Information

Insect: Poecilus cupreus
Gene Symbol: ECU03_0790
Assembly: GCA_963942605.1
Location: OZ012727.1:16147593-16150850[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.004 0.77 11.9 0.4 2 23 79 100 78 100 0.97

2 15 0.58 1.1e+02 5.1 1.6 2 20 106 124 105 126 0.87

3 15 0.0052 0.98 11.6 2.8 1 23 139 161 139 161 0.96

4 15 0.022 4.2 9.6 0.1 3 23 166 187 165 187 0.97

5 15 0.00014 0.026 16.5 4.4 1 23 197 219 197 219 0.98

6 15 0.14 27 7.1 0.0 2 23 225 246 224 246 0.95

7 15 1.6 3.1e+02 3.7 4.9 2 23 253 274 252 274 0.96

8 15 0.0095 1.8 10.7 1.0 1 23 277 300 277 300 0.97

9 15 1.5e-06 0.00028 22.7 2.5 2 23 310 331 309 331 0.98

10 15 6.5e-05 0.012 17.5 0.7 2 22 338 358 337 361 0.89

11 15 0.0012 0.22 13.6 5.4 2 23 372 394 371 394 0.95

12 15 0.01 2 10.6 2.9 1 23 401 423 401 423 0.98

13 15 0.00013 0.025 16.6 0.1 3 23 432 453 430 453 0.93

14 15 1.1e-07 2.1e-05 26.3 1.3 2 23 460 481 459 481 0.97

15 15 0.00018 0.034 16.2 2.4 1 23 487 510 487 510 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.004	0.77	11.9	0.4	2	23	79	100	78	100	0.97
2	15	0.58	1.1e+02	5.1	1.6	2	20	106	124	105	126	0.87
3	15	0.0052	0.98	11.6	2.8	1	23	139	161	139	161	0.96
4	15	0.022	4.2	9.6	0.1	3	23	166	187	165	187	0.97
5	15	0.00014	0.026	16.5	4.4	1	23	197	219	197	219	0.98
6	15	0.14	27	7.1	0.0	2	23	225	246	224	246	0.95
7	15	1.6	3.1e+02	3.7	4.9	2	23	253	274	252	274	0.96
8	15	0.0095	1.8	10.7	1.0	1	23	277	300	277	300	0.97
9	15	1.5e-06	0.00028	22.7	2.5	2	23	310	331	309	331	0.98
10	15	6.5e-05	0.012	17.5	0.7	2	22	338	358	337	361	0.89
11	15	0.0012	0.22	13.6	5.4	2	23	372	394	371	394	0.95
12	15	0.01	2	10.6	2.9	1	23	401	423	401	423	0.98
13	15	0.00013	0.025	16.6	0.1	3	23	432	453	430	453	0.93
14	15	1.1e-07	2.1e-05	26.3	1.3	2	23	460	481	459	481	0.97
15	15	0.00018	0.034	16.2	2.4	1	23	487	510	487	510	0.89

Sequence Information

Coding Sequence: ATGATTGAAACAATTCATAATTTGGATTCCAATGATAAAAGTGAAGCTTTTGTATGTCTTCGCAAATGTCTCGACATagaaaactcaaatatttcaaCTAAGAATAAAAGAAAGACTTCGACAAAATCAGTAACCTCTacatCTGGTTATATTGAAGGAAGACCAAAGCGCAAAATccgtaaaaaaatcaaatttaaaaatcatacTTCAACAACTGTGAAACCGGCAGTACTAAAATGTCGCATCTGTGGTGTTCCAAATAAAACAAAGTCCTCTTTGTTAAAACATCTGGATACTCATATCGGTACTCCAATATCTTGTAAACTATGTAGACGAGATTTTAATAATAGATCATCATTTCTATGCCACATTTCACTAAAAATGTGCAACAAGACCAGGTTGATTGTAAAGAAATACCATTGTACTCAATGTCCAAAAGTATTTGGATATAAAAGACATATTGACAAACATATAGAAGGGCATAAAAGGAATAATTGTACTTACTGTGATGCAAGAATAACAGTGCGAAAGGAATTGGAAGATCATCTTTTAACCGTGCATGGCATTAAACTAGAACGCACGGTTATGTTTAAGTGCGAGTTTTGTGAGAAAAGaTATGTAAAGAAACGTTCATTGTATCGTCATATGAAACAACACGCAGAGGATAAAATTGTTTGTATGGAGTGCGGCTGGTTTAGCGGTACTCCAGAAGAAAATGAACTTCATATGAAAGATCACGAGAAAAATTGGACGTGGAAATGTTACAAATGTAATGATAGGTTCTTGCGAAGACAGCAGTATGTGCATCACATGAAGAGACATGACCGTTACAAATGCGTAACATGTAGTGAAACATTTGCTTTAAAATCTCGAGTTTTAAGGCACAGACAACGGGGACACACTGTTCAAGGATTAGAGCCCCAAAATAAGTGTCCTCACTGCCCGAAGGCATTCCAAAGAAGACTTAATTTACAGATTCATATGCGTAAACATACAGatgaAAAACTTATGACCTGTAAATATTGTGATAAAAATTTTCGATCTCCTTACTTGTATTTTCGGCACGTGGCATCAACAGTCCACGGAATAAATTCCCCGGAAACTAAACAATTAGTTTGCGAAAATTGCGGAAAATCATTCATGAAAAAACACCACTTAGACCAACATTTACATCGAGTGCATAACCAGGCGAAGCAAACGTTTACCTGCGAATTTTgcgattttaaatgttcaaacCGCGCGAATATAGACCGACATCTCAACTTACATTTAGAAGataagaaagaaattatttgcgAACAATGCGGCCAAGCATTTTACAATCAGTTCAGTTTGAAAGATCACATTTCTTACGTTCATTCTCAAGAAAGAGTGTTAAAGTGTACACAGTGCGATAAAGCGTTTAAAAGAAACTCTGAGCTTATTAGACACATGACAAGTCATTCAGAGCTTCGTCCTCATGTTTGTGAAACTTGTGGAGTTTCCTACAAACGAAGAAACCATCTTCGAAGGCACGAAGAGGCCCAACATGGAACTGTAGTGAAAACCAGACGAGTACAGCGATTGACAAAAGGTGAAAACGGGGAATTGATTCCAGTTgcagaagaaaagaaaagaaaaataaatacgaaGGCTCCCGAGCCAGCTGTAAACAACCAGCAACTATTTTCCATTATGGATGCGCAATCTGGAGAAATGGTTACATTCTCGCTTCCAGAAACGATAGAAAATCCAGAATCTTTAGCAATTTTGAATATCAATAGCCAGCAATTCAATCAAGATGTAATTCAAACTACGGAACTGCCAAATTTGGTTTTAAATCCTAGTGACAATATTATACTAACCAACGACCAATCTTTGAACATGGTTAATGCGCTAGAACcaagttttacaaataattttttgagtaCTGAGCTCACCAATTCACAGATTGAAAATTCTTTCATGCCCGCTCATTTCTTGGCGCAGCCAGTAGCTATTCAGAACTCTACAACTTGTGATATTCTGCTACCGGAGAACAGGATGGTGAATCTGCAGACCCAAGGCGAATATTCCCAAAATCCCTATCAGTTTTTGTAG
Protein Sequence: MIETIHNLDSNDKSEAFVCLRKCLDIENSNISTKNKRKTSTKSVTSTSGYIEGRPKRKIRKKIKFKNHTSTTVKPAVLKCRICGVPNKTKSSLLKHLDTHIGTPISCKLCRRDFNNRSSFLCHISLKMCNKTRLIVKKYHCTQCPKVFGYKRHIDKHIEGHKRNNCTYCDARITVRKELEDHLLTVHGIKLERTVMFKCEFCEKRYVKKRSLYRHMKQHAEDKIVCMECGWFSGTPEENELHMKDHEKNWTWKCYKCNDRFLRRQQYVHHMKRHDRYKCVTCSETFALKSRVLRHRQRGHTVQGLEPQNKCPHCPKAFQRRLNLQIHMRKHTDEKLMTCKYCDKNFRSPYLYFRHVASTVHGINSPETKQLVCENCGKSFMKKHHLDQHLHRVHNQAKQTFTCEFCDFKCSNRANIDRHLNLHLEDKKEIICEQCGQAFYNQFSLKDHISYVHSQERVLKCTQCDKAFKRNSELIRHMTSHSELRPHVCETCGVSYKRRNHLRRHEEAQHGTVVKTRRVQRLTKGENGELIPVAEEKKRKINTKAPEPAVNNQQLFSIMDAQSGEMVTFSLPETIENPESLAILNINSQQFNQDVIQTTELPNLVLNPSDNIILTNDQSLNMVNALEPSFTNNFLSTELTNSQIENSFMPAHFLAQPVAIQNSTTCDILLPENRMVNLQTQGEYSQNPYQFL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01275634;
90% Identity: -
80% Identity: -