Basic Information

Insect: Poecilus cupreus
Gene Symbol: -
Assembly: GCA_963942605.1
Location: OZ012723.1:14805945-14809143[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00088 0.17 14.0 0.2 1 19 238 256 238 258 0.96

2 10 0.025 4.9 9.4 4.1 1 23 271 293 271 293 0.98

3 10 8.1e-05 0.015 17.2 1.4 3 23 330 351 328 351 0.91

4 10 0.0032 0.61 12.2 0.1 2 21 410 429 409 430 0.93

5 10 7.6e-06 0.0015 20.5 3.6 3 23 463 483 461 483 0.96

6 10 1.5e-06 0.00028 22.7 0.4 1 23 489 511 489 511 0.98

7 10 0.0029 0.55 12.4 6.8 1 19 517 535 517 540 0.91

8 10 7.1e-08 1.4e-05 26.9 0.7 1 23 546 568 546 568 0.99

9 10 5.6e-07 0.00011 24.0 2.0 1 23 574 596 574 596 0.99

10 10 1e-06 0.00019 23.2 0.9 1 23 602 624 602 624 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00088	0.17	14.0	0.2	1	19	238	256	238	258	0.96
2	10	0.025	4.9	9.4	4.1	1	23	271	293	271	293	0.98
3	10	8.1e-05	0.015	17.2	1.4	3	23	330	351	328	351	0.91
4	10	0.0032	0.61	12.2	0.1	2	21	410	429	409	430	0.93
5	10	7.6e-06	0.0015	20.5	3.6	3	23	463	483	461	483	0.96
6	10	1.5e-06	0.00028	22.7	0.4	1	23	489	511	489	511	0.98
7	10	0.0029	0.55	12.4	6.8	1	19	517	535	517	540	0.91
8	10	7.1e-08	1.4e-05	26.9	0.7	1	23	546	568	546	568	0.99
9	10	5.6e-07	0.00011	24.0	2.0	1	23	574	596	574	596	0.99
10	10	1e-06	0.00019	23.2	0.9	1	23	602	624	602	624	0.97

Sequence Information

Coding Sequence: atgGAAGGTTCTGACTCGAGTCGTGAACTTCTAGATAATGTAACAATGGCAGAAGTTTCTCCTCCATTTATGATGCAGAGGATAGGAGTTGAACCACAGCTTCTAAGTGGAGAATTGCTTCCTTCACACAGTGGTTTAGTTGTGGATATGACAAACAATGAATATCTACCTGCAGTTAGTTATGCTGCTGATGATTTACTAGATCACGATTTAACAGAAGAAGATCGCAATTTGGCTGCTGCTCTTGTAGCTGTACAACTTGTACAACAACAAAAGCAGCAACAGCTTCATCAGGATTCAAATGTTATAGTTAGCACAAGTTCTTTAGCATCTTTAGTATCTTCCTCTCATTTAGAAAACGGAAAAGTAGATTTAGTAGACCAGCAACTTGTTATTTCGCCTGTCGATAAACCTGTGATATCATCAGTTAATAATGCTTACTTAAGCACAATTGAAGAAAGACATTTACATCACGATTCAATTCTAAAAAAGTATGGCAATATATCGGTAGATCCTAATGACCGATATTCCACTGGACATATAAAACATGAATACATAACtgtgaaacatgaaaatgatgAATCGATTCAACATCAGCGTGATTCAGACTGCGAGAATAAAAATGATGTTCGTTCATCCAAGAAAAGTCTTCCACATAAAAAGAGAATTTCTCGTAAGTTAAAAAAGAACTGTACTGTTTCAAGAAAAGGGCATAAATGTACTACTTGTGATCAGATTTTTAATACAGCTGAGGAATTAAACGTTCACAGCGCGTGCCATTCTGTAAATATCGTTGTTCAACCAAATCCGTTTTCCTGCCAAATTTGCGGCGTTATGTGTCATGATcagttacaattttttgaacatttaaaaactCATTATGAACCGAATTTAGTTTCACATCAAGTTAAAGAGAATGGTTCTGTATCAACAAAAACTGAAGAATCAAAAGATTCTTTACTTAGCTCATTACTGCCACCTTTAAACTGTATTCATTGTGGTAAAAATTTTCGAAGACAAAAGGCGTTTGAAGCACATATGAGGGATGTTCATAATAGGattgaagATGAATTCAGTGAACCAGAAGATCTTATGGAAGGAATTCGTAGTGTGGTAGAAGCAAACGATCGGGACTCCGGTGAAGAAGGCCCTGACTCTAAAGTGTGGTACCATGCCAGCGGCCTTCAAGCTGAGTCAGATCTCCAAGAGCTCGATGCTCAAGGACAAGTGTGCCATCTATGCGGCCAAATATTCAGCAGCAACGAAGAAGTGTTACAACATCTGCAAGAATGTAAAGCAAGCATTGAAACTAAACTGGAACAGACCTCGGACTCTGAAATTAAAAGCAGGACAAGAAAAAAGAGGCGAAAAAATGGGAATTTGTTTTGTCCCCATTGCGATCGGGTTTTTAGTCACAGAAATTCGTTGATGTATCACATGAGGGGGCACACGGGAGAACGGCCACATCAGTGCGATATTTGTGGGAAGAGCTTTTTTGCAGCTAGCGCCCTTAAAgttCATATACGGTTACATTCAGGTGATAAGCCGTATAAGTGTGAATATTGCGGTAGACATTTTAGGCAATGTggtgatttaaaatatcattgtatATCTATACATTCGGATGAAAAACAATACCAATGCGAATACTGCGGGAAAGATTTCGCGcgaaaatattctttaattgtTCACCGGAGAATTCACACTGGAGAGAAAAATTATCGCTGCGAATTTTGCGGAAAAACTTTCAGGGCATcttcatatttacaaaatcatcGAAGGATACACACAgGTGAAAAGCCACATCCTTGCGAAGTATGCGGAAAGCCTTTCCGGGTTCGGTCGGATATGAAGCGGCATTTAAACACTCATACACGCCTGAGAAACTCTAACTCCCAACCACCTAGGCTAACTACCGCCACGACTGCTGTGATAGAAGTTGCTGATGTAGATAATTCAGAAAGTATAGTTCCTGATAATGACGATGGAATGATAGACAATCAAGACATCCATATAGAAAATGAAGAACATGCGTCAGAAGAAAGCGTCCAATACCAAAGAGACCCTCTTGAAACAGTGAGAGAAGGAACGAATACCCTGTATGTTATGCCATTAATCATTACTTAA
Protein Sequence: MEGSDSSRELLDNVTMAEVSPPFMMQRIGVEPQLLSGELLPSHSGLVVDMTNNEYLPAVSYAADDLLDHDLTEEDRNLAAALVAVQLVQQQKQQQLHQDSNVIVSTSSLASLVSSSHLENGKVDLVDQQLVISPVDKPVISSVNNAYLSTIEERHLHHDSILKKYGNISVDPNDRYSTGHIKHEYITVKHENDESIQHQRDSDCENKNDVRSSKKSLPHKKRISRKLKKNCTVSRKGHKCTTCDQIFNTAEELNVHSACHSVNIVVQPNPFSCQICGVMCHDQLQFFEHLKTHYEPNLVSHQVKENGSVSTKTEESKDSLLSSLLPPLNCIHCGKNFRRQKAFEAHMRDVHNRIEDEFSEPEDLMEGIRSVVEANDRDSGEEGPDSKVWYHASGLQAESDLQELDAQGQVCHLCGQIFSSNEEVLQHLQECKASIETKLEQTSDSEIKSRTRKKRRKNGNLFCPHCDRVFSHRNSLMYHMRGHTGERPHQCDICGKSFFAASALKVHIRLHSGDKPYKCEYCGRHFRQCGDLKYHCISIHSDEKQYQCEYCGKDFARKYSLIVHRRIHTGEKNYRCEFCGKTFRASSYLQNHRRIHTGEKPHPCEVCGKPFRVRSDMKRHLNTHTRLRNSNSQPPRLTTATTAVIEVADVDNSESIVPDNDDGMIDNQDIHIENEEHASEESVQYQRDPLETVREGTNTLYVMPLIIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00029560;
90% Identity: iTF_01275601;
80% Identity: -