Pcup020300.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Poecilus cupreus
Gene Symbol
Zfa
Assembly
GCA_963942605.1
Location
OZ012718.1:12091737-12102175[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 58 0.00015 0.029 16.4 1.9 1 23 19 41 19 41 0.99
2 58 0.00035 0.067 15.2 0.2 2 23 48 69 47 69 0.96
3 58 7.2e-07 0.00014 23.7 2.0 2 23 76 97 75 97 0.97
4 58 0.47 90 5.4 6.8 1 23 103 125 103 125 0.97
5 58 6.8e-06 0.0013 20.6 0.2 1 23 131 153 131 153 0.98
6 58 6.2e-06 0.0012 20.7 3.3 1 23 159 181 159 181 0.98
7 58 0.00053 0.1 14.7 2.9 1 23 230 252 230 252 0.97
8 58 0.19 37 6.6 1.6 2 22 259 279 258 282 0.89
9 58 0.69 1.3e+02 4.9 1.4 1 21 285 305 285 306 0.92
10 58 0.0031 0.6 12.2 2.8 2 23 314 336 313 336 0.89
11 58 0.0075 1.4 11.0 2.4 1 23 340 362 340 362 0.96
12 58 0.00029 0.055 15.5 3.7 1 23 370 393 370 393 0.98
13 58 0.00031 0.059 15.4 0.2 3 23 401 421 399 421 0.97
14 58 0.093 18 7.6 0.5 2 13 428 439 427 440 0.90
15 58 0.24 45 6.3 3.1 2 23 451 473 451 473 0.97
16 58 8e-05 0.015 17.3 0.1 2 23 480 501 479 501 0.96
17 58 8.6e-06 0.0016 20.3 0.7 3 23 509 529 507 529 0.97
18 58 1.3e-05 0.0024 19.8 1.7 3 23 537 557 535 557 0.98
19 58 6.7 1.3e+03 1.8 0.2 1 13 563 575 563 577 0.90
20 58 0.00081 0.15 14.1 0.1 2 23 580 601 579 601 0.96
21 58 4e-05 0.0076 18.2 1.1 2 23 608 629 607 629 0.97
22 58 9.4e-06 0.0018 20.2 0.6 1 23 635 657 635 657 0.98
23 58 0.14 28 7.0 3.7 1 23 663 686 663 686 0.97
24 58 8.2 1.6e+03 1.5 2.2 1 23 718 740 718 740 0.92
25 58 0.014 2.7 10.2 0.4 1 22 754 775 754 775 0.96
26 58 0.12 23 7.3 2.6 2 23 783 805 782 805 0.95
27 58 2.3e-05 0.0044 18.9 1.7 1 23 809 831 809 831 0.97
28 58 0.53 1e+02 5.2 6.2 2 23 840 861 839 862 0.95
29 58 0.00012 0.022 16.7 0.1 2 23 870 891 869 891 0.96
30 58 7.4e-06 0.0014 20.5 1.5 3 23 899 919 897 919 0.97
31 58 4.8e-07 9.1e-05 24.2 1.7 1 23 925 947 925 947 0.98
32 58 0.1 19 7.5 4.0 1 23 953 976 953 976 0.97
33 58 0.0013 0.26 13.4 2.9 1 23 1008 1030 1008 1030 0.98
34 58 0.00027 0.052 15.6 2.3 1 23 1036 1058 1036 1058 0.98
35 58 0.0011 0.21 13.7 0.6 1 22 1063 1084 1063 1084 0.96
36 58 0.34 65 5.8 1.4 3 23 1093 1114 1092 1114 0.92
37 58 2.1 4e+02 3.4 0.0 1 23 1118 1140 1118 1140 0.95
38 58 1e-05 0.0019 20.1 0.8 1 23 1148 1171 1148 1171 0.97
39 58 8.4e-05 0.016 17.2 0.1 2 23 1178 1199 1177 1199 0.96
40 58 5.5e-06 0.001 20.9 2.3 2 23 1206 1227 1205 1227 0.97
41 58 2e-05 0.0038 19.1 0.5 1 23 1233 1255 1233 1255 0.98
42 58 0.032 6.2 9.0 2.3 1 23 1261 1284 1261 1284 0.96
43 58 0.0027 0.52 12.4 2.2 1 23 1322 1344 1322 1344 0.98
44 58 2.1e-05 0.004 19.1 0.3 1 23 1350 1372 1350 1372 0.98
45 58 0.02 3.7 9.7 1.3 1 21 1377 1397 1377 1398 0.95
46 58 0.0064 1.2 11.3 1.1 2 23 1406 1428 1405 1428 0.96
47 58 0.0042 0.8 11.8 0.3 1 23 1432 1454 1432 1454 0.96
48 58 0.0045 0.86 11.7 2.6 1 23 1463 1486 1463 1486 0.94
49 58 3.8e-05 0.0072 18.3 0.1 1 23 1492 1514 1492 1514 0.98
50 58 1.3e-06 0.00025 22.9 0.5 2 23 1521 1542 1520 1542 0.97
51 58 3.4e-06 0.00064 21.6 4.7 1 23 1548 1570 1548 1570 0.97
52 58 0.01 1.9 10.7 0.1 1 22 1761 1782 1761 1782 0.93
53 58 0.0033 0.63 12.2 0.8 3 23 1793 1813 1792 1813 0.97
54 58 0.00046 0.088 14.9 2.4 1 23 1819 1842 1819 1842 0.90
55 58 6.5e-07 0.00012 23.8 0.2 3 23 1884 1904 1883 1904 0.99
56 58 1.2e-06 0.00023 23.0 0.9 1 23 1910 1932 1910 1932 0.99
57 58 9.1e-05 0.017 17.1 4.3 1 23 1938 1960 1938 1960 0.98
58 58 4.2e-06 0.00079 21.3 1.4 1 23 1966 1988 1966 1988 0.98

Sequence Information

Coding Sequence
ATGGAAGCTGTAAAGGAACATTCAGATACACATAAAACAAATCGCACCGGAAAATATCAATGCAAATTTTGTGGCAAAAGATTTACGAGTAGGCAAGCTATATCTGTTCATGAACGTAAACACTTAGATTTAGATTCAGTGATGTGTGATGTCTGCGGGAAGAAATTATCTACCAAACCGAAATTGGAAGGACATATGCGACTACATACTGGCGAGAAACCTTTATCTTGTGAACACTGTGGAAAAAATTTCAGGAACTCAAATTCTTTGACTATTCATATGCGTATTCATACAGGAGAGAAACCATATGCCTGTCCCCATTGTGACATGCATTTCAgtcaatatttttcttatatttgtcaTGTTCGAAGGCATACTGGCGACAAACCTTACCCTTGCACACTTTGCGATCTCAGATTTATCAATAAGGGTAGTCTTCGAGTTCACATGATCACTCATACTGGGGAGAGACCACATAGCTGTCCTCATTGCGATAAACGTTACACTTCGCGAGGTGGTCTAACTATTCATCTTCGAACACATACGGGCGAAAAGCCGTTTTCTTGTAGTATATGTAGTGAAAAaTCTCAAGAGGCTTATGAAGATTTGGAAATGAACATGATATATCGCGAAGCCGACAAATATTTGGAAATTGTTACTGGCCCGGACAATCGCAAGATAAAGCGTTATAAATGTTCCAAATGTCCAAAAGTATTTCAGTATAAAAGCCAATTTGTAACTCACAATTTAAGACATGTGAAAGTAAAAACTTGTGTGTGTTCCATTTGCAATAAACAACTTAAATCCCGATTTGCAATCAAAGCTCATTTAAAATACGACGATCATACAATTTATAAGTGCGAAGTTTGTCAAAAAGAATATGAAATAAAAGTCTGTTTAGATTACCATTATAGAAGTTATCCTCCCACAATGGTGGTTCcatgtaataaatgtaataaaaaatttcatacaaaagaaaatttacaTATCCACGAAGCGCAAGAACATCGTTCCAGCTATAATTGTTATGCTTGCAGTAAATCTTTTTCTGATGTACAATCGCTGAAACATCATGTAAAAGAGCATAACGGATCAGTAGTATCAAAGTTTCAATGCGAATTCTGTGGAAAACAATGTTCTTCACGTCAAACATTAAACGTACATCGAAGAAGCTTACATTTAGACATGCGCTCAGTAATATGTGACCTGTGTGGAAAGAAACTTTCTTCCAAAACCGTCTTAGAAGATCACATGCGCATGCATAAAGGGGAGCGATCTCTTTCATGTGAACACTGTGACAAACGGTTTACTTCAAAAGTAATACATAACGGCACTGAATCTACCAAACCTCAGTGCGAGTTTTGTGGTAGAAATTTTGCGTGTCGACAATCTCTTAATGTTCATTTTCGAAGCCAACATTTAGGGTTATTATCAGTTGTTTGTGATATCTGCGGAAAAAAATTGTCTTCCAAGCGAAGTCTCGAAGAACACATGTTGCTTCACAAAGGAGAGAAGCCTCTGGCTTGTGAACGTTGCGGAAAAACTTTTGCCAAAAGAAGCACCTTGAGAGTTCATGAACGCACACATACTGGAGCTAAACCTTACGGATGTCCACATTGTGACAAAAGATTTACTCAACGAAATTCATTAGTAATACATGTGCGAAAACATACAGGTGATCGTCCATTCTCTTGTGATTTGTGCTCCGAAAAGTTCATAACTTCATTATCGGTTGTAGTTTGTGACATTTGTGGAAGAAAATTGTCTTCCAAGCGAAGTCTGGAAGATCACGTGTTGATTCATAAGGGAGAGAAACCACTGACTTGTGAAAGTTGTGGTAAAACTTTTGCCAAAAGAAATACCTTGAAAGTTCATGAACGCACACACACTGGAGTCAAACCTTACGCTTGTCCACAATGTGACAATAGATTTACTCAACGTAGTTCATTAGTAATTCACTTACGCAAACATACTGGCGATCGTCCATACTCTTGTGATTTGTGTTCTGATAGATTTATTAGTAGAAGTTGCTTAAACTTGCATCGAAAATCTAAACATAAAATACTgtTGGAAGATTACGTTAGACTGTTACAAGAAGCTGATACTAATTATACTGAAATATTAACATCGACAAACCGTTGGCGAAGAGTTTATAAATGTTCAAGCTGCCCTAAAGTAATTCATGAACGAAGTCGATTTTTAGATCACAGTTTAAAACATATAAGGGCCAAGAATTTTGCCTGTGATGTGTGTGATACATacaaatgtgaaatttgttataGAGAATTTGCTGCTAAATTTAACTATGATCAGCATATTCGCTCGTACCCAATAAATCTAGTAGTACCATGTACACATTGTGATCGAAAATATCATTCACAGAGAGCAATGTTAACTCATGTTTTAAAAGATCATGAAAAGAAATTCTCATGCTACTCTTGCAGTAAAAGTTTCAAAGACAGTGATTCTCTAAAACGGCATGTAATGATACACAACAGCACTGAATGTATTAAATCTCAGTGTGAATTTTGTGGCAGGAACTTTGCTTGTCGACAATCTCTAAACAGTCATTTTCGTAAACATCATTTAGGTTTATTATCGGTTGTAGTTTGTGACATCTGTGGGAAAAAATTGTCTTCCAGAGGGAGTCTAGAAGACCATATGCTTCTTCATAGAGGGGAAAAGCCAATAGCTTGTGAACACTGTGGAAAGACATTCACCAAAAGAACGACATTAATAGTTCATGAACGTACGCACACTGGAGCCAAACCTTACGCCTGTCCACATTGTGACAAAAGATTTACTCAACGAAGTTCATTAGTGATTCACGTACGCAAACATACTGGCGATCGTCCATATTCTTGTGATTTGTGTACTGATAGATTTATCAGTAAAAGTTGCTTAAACTTACATCGAAAatctaaacataaaatattGTTGGAAGAATACGTTAGACTGTTACAAGAAGCTGATACTAATTACATAGAAGTATTAGCACCAACGAATCGTTGGCGAAGAGTTTATAAGTGTTCAACCTGCTCCAAAGTATTTAACGAAAGAAGTCAGTTTTTAAGTCACAGCATGAAGCATCTGAAGGCGAAAAATTTTGTCTGTGACGTATGTGATCGAGCATTTCAACATAAAACTACTATGCTTAAACACATGAAATTACACAAAGGAGAAACTTATAAATGCGAAATTTGTTACAAAGAATttgctgttaaatttaattacgaCAAACATATACGTTCCTATCCAATCAATCTAGTAGCGCCATGCACACGTTGTGATAGAAAATTTCATTCCCGGAAAGCTATGTTGGTCCACGTTGTAAAAGATCATGATAAAGGATTCATTTGTTATTCTTGTGCAGCACCTTTCGACTCTGTGGATGCTCTTAAGGAGCACGTAATCATTCACAATACAAACATGACAGCAAAGTATCAGTGTGAAATTTGTGGAAAACGATTCGCTAAAAACCATGTCTTAAATGCTCACTTACGTGGACAACATTTAGATATGAGATCTGTAGTTTGTGAGATTTGTGGGAAGAAACTTTCATCAAGTACAAGTCTTAATGAACATATGTTACTCCATCGTGGGGAAAGACCGCTAAGTTGTGAACATTGTGGAAGAACATTTGCTAAGAAAAATACTCTGAATGTTCATTTGCGAACTCACACAGGTGTTAGGCCTTACGCGTGTCCGCATTGCGACAAACGCTTTACCCAAAGCTCTGCTGCTGCTATTCATGCTAGAAAACATACTGGCACGCGGCCATTTGCGTGTGATCTCTGCCCAGACCGTTTTGTCAGCAAGAGCTGTTTAAATCTCCATCGTAAATCTAAACATAAGATACTATGTGAAAAAGAACCAATGGATTCCGAATACGTAAAATTGTTGCATGAAGCTGATACAAAGTTCGTTCACATATTAACGGCCAATAATCGTTTACGTAGGCAATATAAATGTTCTTCTTGTCCGAAAGTATACAACAACAGAAGCAAATTTCTTGATCATAGTATGAAGCATTTAAAGAAACGAAATTTTATTTGTCCAGTCTGTAAATCCGCTTTCAAACGGCAGATGTCTTTAATTAAACACATGAATATTCACACGGATAATGCTTATAAATGCAGCATTTGTTTAAAACACTTTGCATTAAAACAATACTATGAAAAACACATCGCAAAATATCAGCCGGACAAAGCAGTACAGTGTTCAAAATGCGAGAAAAAATTTCATGTTCAGGATAATATGTTAATCCATGTTCTTACGGATCATGATAAGAAATTCTCCTGTTATGATTGTGCACAAAATTTTACTGATTCGAGATCACTTCAAGATCATGTTATTGAACACAATGGAAAAGAAGCTTCAACTAGACATCAGTGTATTCTTTGCGGCAAGATTTTTTCTAAACGTGAATCACTTCTGTCTCATCACCGAATAATTCATTTCGATTTAAAACCATTTGTCTGTGATGTTTGTGGAAAGAAATTGTCATCAAAAATGAGTTTAAATGCCCATATAATTGTTCATAAAGGGGAGAAGCCCATAACTTGCGATGTTTGTGGCAAACAATTTGCGCAGAAAAGTACTTTGAAACTTCATGTTAGAACACATACaggcgaaagaccccattcttgCCCACATTGTGACAAAAAGTTCACACAGCGTAGTCCGTTGAAAATTCACATACGTAAACATACGGGAGAAAGGCCTTATAACTGTGATTTGTGTAATGGACAATTAAACATAAAACTGCCGCCGGGAGTCAGAATTGAAAGAAATGTAGACAGAAGCTCAATTTTGAAGGAGGAGAAGGACGAAGTGGTTAAAACCCCTAATAAGAAGGCCAATGATAGTAAAAAGGAATCAATTTATACTGAATTTTTAAGTAAAGTCAGTCATCTTACATCTATCAAAATTAAGAAGATAGAAGCTGCCACAAACATTGAAACACCAAATACGTCTaatattgtagaaaatttaagcAAATGtggtttaattattaaaaaagtgcCTTGCACTACTGATATTACcactgaaaatgaaaatttaccagAAACAAAGCCTATTGAAAAAGACGACGATTTCAATGATGATAATGAATCAGAATATGAAATTGAAACTCTTGATGATGACGAATCAGATTTGGAATTTGTTCCGGAATTGAAAAGAAAACGTGAAGAAAAACTTGCGAAAGAAGTAGCGAATCATCCTGCACCACAGCCACAGAAAAAATCCagagaatttataaaaattaaaagcacTAATTATTTATGTGTGATGTGTAGCGAAAAGTTTCCTTCATTTGAACTTTTAACTGCACATATGCGCAGCACAACTCCATGTAGAGTTATTGTTGTTGCTTGTCCAGTTTGCGGCAAAGAATTTCCTAGTAAATCAAGATGTACTGCCCACATGTATTCGCACAAAGAAAAACCTAagtataattgtaataaatgtgaTAAGCATTTCTCGAACCCGGTTACATTGCAAATGCATTCTGAATATAATCATACCGAACATTTCGACTCAACGACCGATGGCTGGAAATGCAAAATGTGCGATTATTTCTGTGATTCGCGCATAAGAGTTGTGCATCATGTGAATGCCAAGCATTTACATATAAGTGCTATGTTGTGCGATGTTTGTGGAAAAAGTTTTGTTCGGGAAAGTAGTCTACGTGCTCATATTATGACTCATAGAGAAACTAGATCATATGTATGTCAAATTTGTTCAAAAGGCTTTAAAATGAAAAGTTCTCTTCGAGCTCATATCAAAACACACAATCTTGAAAGACGTTATGTTTGCGATGAATGCGGAAAGTCTTTCAAGAAAAACTGCACCTTAACAGAGCATAAAAAATATCACGCGGGTGATTTTTCGTATTCTTGTCTGTGGTGTGATAAACGATTTGTTTCGAAATCTATGTTAAACACCCATATGAAGAATCATTCAGCTTAG
Protein Sequence
MEAVKEHSDTHKTNRTGKYQCKFCGKRFTSRQAISVHERKHLDLDSVMCDVCGKKLSTKPKLEGHMRLHTGEKPLSCEHCGKNFRNSNSLTIHMRIHTGEKPYACPHCDMHFSQYFSYICHVRRHTGDKPYPCTLCDLRFINKGSLRVHMITHTGERPHSCPHCDKRYTSRGGLTIHLRTHTGEKPFSCSICSEKSQEAYEDLEMNMIYREADKYLEIVTGPDNRKIKRYKCSKCPKVFQYKSQFVTHNLRHVKVKTCVCSICNKQLKSRFAIKAHLKYDDHTIYKCEVCQKEYEIKVCLDYHYRSYPPTMVVPCNKCNKKFHTKENLHIHEAQEHRSSYNCYACSKSFSDVQSLKHHVKEHNGSVVSKFQCEFCGKQCSSRQTLNVHRRSLHLDMRSVICDLCGKKLSSKTVLEDHMRMHKGERSLSCEHCDKRFTSKVIHNGTESTKPQCEFCGRNFACRQSLNVHFRSQHLGLLSVVCDICGKKLSSKRSLEEHMLLHKGEKPLACERCGKTFAKRSTLRVHERTHTGAKPYGCPHCDKRFTQRNSLVIHVRKHTGDRPFSCDLCSEKFITSLSVVVCDICGRKLSSKRSLEDHVLIHKGEKPLTCESCGKTFAKRNTLKVHERTHTGVKPYACPQCDNRFTQRSSLVIHLRKHTGDRPYSCDLCSDRFISRSCLNLHRKSKHKILLEDYVRLLQEADTNYTEILTSTNRWRRVYKCSSCPKVIHERSRFLDHSLKHIRAKNFACDVCDTYKCEICYREFAAKFNYDQHIRSYPINLVVPCTHCDRKYHSQRAMLTHVLKDHEKKFSCYSCSKSFKDSDSLKRHVMIHNSTECIKSQCEFCGRNFACRQSLNSHFRKHHLGLLSVVVCDICGKKLSSRGSLEDHMLLHRGEKPIACEHCGKTFTKRTTLIVHERTHTGAKPYACPHCDKRFTQRSSLVIHVRKHTGDRPYSCDLCTDRFISKSCLNLHRKSKHKILLEEYVRLLQEADTNYIEVLAPTNRWRRVYKCSTCSKVFNERSQFLSHSMKHLKAKNFVCDVCDRAFQHKTTMLKHMKLHKGETYKCEICYKEFAVKFNYDKHIRSYPINLVAPCTRCDRKFHSRKAMLVHVVKDHDKGFICYSCAAPFDSVDALKEHVIIHNTNMTAKYQCEICGKRFAKNHVLNAHLRGQHLDMRSVVCEICGKKLSSSTSLNEHMLLHRGERPLSCEHCGRTFAKKNTLNVHLRTHTGVRPYACPHCDKRFTQSSAAAIHARKHTGTRPFACDLCPDRFVSKSCLNLHRKSKHKILCEKEPMDSEYVKLLHEADTKFVHILTANNRLRRQYKCSSCPKVYNNRSKFLDHSMKHLKKRNFICPVCKSAFKRQMSLIKHMNIHTDNAYKCSICLKHFALKQYYEKHIAKYQPDKAVQCSKCEKKFHVQDNMLIHVLTDHDKKFSCYDCAQNFTDSRSLQDHVIEHNGKEASTRHQCILCGKIFSKRESLLSHHRIIHFDLKPFVCDVCGKKLSSKMSLNAHIIVHKGEKPITCDVCGKQFAQKSTLKLHVRTHTGERPHSCPHCDKKFTQRSPLKIHIRKHTGERPYNCDLCNGQLNIKLPPGVRIERNVDRSSILKEEKDEVVKTPNKKANDSKKESIYTEFLSKVSHLTSIKIKKIEAATNIETPNTSNIVENLSKCGLIIKKVPCTTDITTENENLPETKPIEKDDDFNDDNESEYEIETLDDDESDLEFVPELKRKREEKLAKEVANHPAPQPQKKSREFIKIKSTNYLCVMCSEKFPSFELLTAHMRSTTPCRVIVVACPVCGKEFPSKSRCTAHMYSHKEKPKYNCNKCDKHFSNPVTLQMHSEYNHTEHFDSTTDGWKCKMCDYFCDSRIRVVHHVNAKHLHISAMLCDVCGKSFVRESSLRAHIMTHRETRSYVCQICSKGFKMKSSLRAHIKTHNLERRYVCDECGKSFKKNCTLTEHKKYHAGDFSYSCLWCDKRFVSKSMLNTHMKNHSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-