Pcup008408.1
Basic Information
- Insect
- Poecilus cupreus
- Gene Symbol
- mysm1
- Assembly
- GCA_963942605.1
- Location
- OZ012714.1:312535-317060[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-07 0.0005 21.7 0.0 4 43 104 143 101 146 0.94 2 3 2.8 7.1e+03 -1.2 0.0 33 45 431 443 422 444 0.83 3 3 3.8 9.5e+03 -1.6 0.0 11 33 598 621 596 621 0.81
Sequence Information
- Coding Sequence
- ATGGCGGATGACGACGAAATTGACGTTTTAGGTGACTTCTCTCTAGATAATTTGCTGTCTAAAAATGAATCGGGAATtcCGTCTTGTTATGATAACTCCGTTCTTACATCTCAGAATTCGGAATTATTAAGTTGTGATTACTCTCTAAACTCTCAGTGGTTACTGGAGAACCCAACATCAAACACAGATTGTTGGTATACAAGTGCCGGTACAGATTTCAATACAGTAGACGCTAGTTCAGAAACAAATACTAGTTTAGGTTTTGATGAGGTAATATGTACAGAAAACAAGGCTTTGGATGAAACAGGATGGACGGATGAGGAAAAAACATCATTATTGAAGGGTTTGGAAATATTTGGAAGAAACTCGACAAATTTGTCTCAGTTTGTTGGCACTAAATCTCCTAACCAAatcaaacattatttaaaacatcATTATacgaaaaatgttacaaatctcagttttgcttttaataatgtttataatactGTTGACATAACAGATAAGCAATCTCATATGGCTCATTCTAATTCGGATGATATACCATCggtatttaaaatgtcagatATAATAGAAGATGCACAGattCCGGCGTCAATAGAGGAAGTAATAGCAGCAGTGAGCACAGCGAAACCTACggttcaaaatatttgtaagaaaAGTCTTAATAAAAAGAAGGTTTGCCACAGTTATAAAACTCAttcgtcaaaaaaattaaaatatgcggATCAGCCAgtgtttaatttcaataaaaagaaattaatccGCCCAAAATtaccagaaaaaaataaaaagtttgttgAACGAAAACGAATTAAAtcggaaaaaaatgttttaatcaaAGAATTTCCGGAAATTGGCTTAGTGAAGAAAGAATATATTCCGCCAGTTGTTCTACCTGTATCTTCAGGAGAAGAACTTataaaaataaaaaaggagAATTCAGAATCTGAATCGGAAACTGAAATTGAAGTAGATATCGACGAAGATATTGAAAAAGTAGTAAAACCTGAAGTTAATGCTGTGAAAGAAGAAGTTAAAGAAGAGAAAAGCGTTGAACAGGAAATTATTCCAACAGTTGAAGAAAACATCTCTAAAGAAAATGAACAAGAGGAAATGTTGAATCGTCGGATAAAATCAATGAGTGATTCGGTGCTAGCATTTTTAACAAATAGTGATGTTCCGTCTGAGGAGTGCGTTCTTGAAGAAGACGTTATAACCGAGGTGGAGAAGAGTATGCATGCGGAATTTTTTGAAGGCAGGCCTACCAAAACTCCCAGTCGCTACTTAAAAATAAGAAATCACATAATTGATTATTGGTTAGAAAACAAACCAATGTATTGTACGAAAACTGCCGTTCGTCAAGGATTAAAAAATTGTGGTGACGTGAACTGCATTGGAAGAATTCACCAATATTTAGAACAAATTGGAGCAATTAATTTTGGTTGCGaacaaataaattatgtgaggccattgattaatttaattattacgtCGCCAGCGAAAGAGAAACCAGTTGTAATTCATCCACAGAAACTTGAACTTGTGCGGCCCCGAATGaaaaagaaatacaataatGACGGCGAAGGAGGATACACAATGATGCATGATGAAAATGGAGAAATCATTGATACAACAGTAGTAAATCAGGACAAGCAAGCAAAACCCAGAAACAAGagacaaaatattaaactaGTTTATTGTAAAGGCTTCACAGATGATAATCCAgCACCCTTCTCAGTAACATTGCACATCAGTGCGTTGCTGCTGATCGACATGCACGCGCATTCCGCTCTGATAGAAGTGATGGGGTTGTTAGGGGGAACATTCGATCAAATACAGAAAGTTTTACACATTACCAGATATATTCCATGCAGAGGAACAGATCATAGCAACACTCATTGTGATATGTGTCCAGTGTCTCAAAGCGAAGCCTCCGAGCTTCTGATCTCCGAAGGTGTTGAAGTAGTAGGTTGGTTTCACTCCCATCCAACTTTCTACCCAAACCCATCTCTTCAAGACATTGACACTCAACTAAACATGCAACTATATCTCAGCAATGAATACAAACCGTTCGTTGGTGTTATATTATCACCATTTCGAGCCCTGGCCACAGCTTTAGTCTCGGAATACAGATGTTTAATCGTCGATAAAAAAGAGAACGATCCCGAGGACGTTGGAACGCCGTATAAGTTTCAAACTAACCTTATTTCGGATCATTTAGACGTTGATTTGTTCCTGAGATACGCAGCGGATATGTTTTCAGCGAAGAGCAATATTCCCAAAGAGTTTGTTGTTGATTTTCACAAGCCGTATTTTCAAGACACAACCATGAGTTATCTAGAGAAGCTCTTGGCGAGTATCAAGCTACATTTGGCTCGTTGTagcgaaataaataaaatgacttGTGATGCAATAGTCCATGGTATTACAGAGGTATGCTTGAACTATATTAATACTCagtaa
- Protein Sequence
- MADDDEIDVLGDFSLDNLLSKNESGIPSCYDNSVLTSQNSELLSCDYSLNSQWLLENPTSNTDCWYTSAGTDFNTVDASSETNTSLGFDEVICTENKALDETGWTDEEKTSLLKGLEIFGRNSTNLSQFVGTKSPNQIKHYLKHHYTKNVTNLSFAFNNVYNTVDITDKQSHMAHSNSDDIPSVFKMSDIIEDAQIPASIEEVIAAVSTAKPTVQNICKKSLNKKKVCHSYKTHSSKKLKYADQPVFNFNKKKLIRPKLPEKNKKFVERKRIKSEKNVLIKEFPEIGLVKKEYIPPVVLPVSSGEELIKIKKENSESESETEIEVDIDEDIEKVVKPEVNAVKEEVKEEKSVEQEIIPTVEENISKENEQEEMLNRRIKSMSDSVLAFLTNSDVPSEECVLEEDVITEVEKSMHAEFFEGRPTKTPSRYLKIRNHIIDYWLENKPMYCTKTAVRQGLKNCGDVNCIGRIHQYLEQIGAINFGCEQINYVRPLINLIITSPAKEKPVVIHPQKLELVRPRMKKKYNNDGEGGYTMMHDENGEIIDTTVVNQDKQAKPRNKRQNIKLVYCKGFTDDNPAPFSVTLHISALLLIDMHAHSALIEVMGLLGGTFDQIQKVLHITRYIPCRGTDHSNTHCDMCPVSQSEASELLISEGVEVVGWFHSHPTFYPNPSLQDIDTQLNMQLYLSNEYKPFVGVILSPFRALATALVSEYRCLIVDKKENDPEDVGTPYKFQTNLISDHLDVDLFLRYAADMFSAKSNIPKEFVVDFHKPYFQDTTMSYLEKLLASIKLHLARCSEINKMTCDAIVHGITEVCLNYINTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -