Pcup039510.1
Basic Information
- Insect
- Poecilus cupreus
- Gene Symbol
- Trerf1_1
- Assembly
- GCA_963942605.1
- Location
- OZ012725.1:4408893-4414559[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2 1.1e+04 -1.7 0.0 31 43 264 276 256 276 0.87 2 2 1.9e-11 4.7e-08 34.6 0.1 3 46 931 974 929 974 0.96
Sequence Information
- Coding Sequence
- ATGGATCAATGGATACCGTATTATTATCGATTTTATCAgtcgCAACAAACATCATCAACAAAGAGTAACACAAGCAGCAGCGGATCTAATCCTTCGCAGGTGAAGTCGACAAATGCGACGTCCAGCGGCGCGACCGTGGCGGCCGCGTCATCTGGACCCACCTCCACCTCCAGCACCACTGCTGCCGCCGCTGTCGCCAAGCCCGAGCTTAAACCCGTCGAGTGCAACCTGTGTCATAGAAAGTTCAAGAACATCCCCGCGCTCAACGGACACATGCGGCTGCATGGCGGCTACTTCAAGAAGGACGCGGAGAACAAGAAGTGTGAGAAGAAAGAAAGCACAGGTCCACCACTGCAGACAGCCAGCGTGAGCGTCCGCGCCCTCATCGAGGAGAAGATCATCAGCAAAAGAACAACGAACCCAGCCGTGACGCAGCAGTCGAGCGGCAGTGGCCCCGCTGCGGCGGCGAGCGGCAGCGGAGGCGGCGCGCCGGCCACCACGCCCACCGAGAGCACCGCGCCGCCGCTCTATCCACTCTCCATGCATTCCACGGGCGATGCGGACGCCAGCGCCAAGGTGACGTCGTTCGTGGTGCCCGCGCCGCCTGCCCCCCAGCCCGCCGCAGCTGCCGCCGCCCCCGCGCCCGCCGCCGCGCGCAGACATTCCGACGCCGAGTTCACGGTTCCCCGCGCGCCCGCCACCGCCGCTGTGCAGCAGGAGGCCGAGGCCCTCGCCGACATGATCCTCAAGCGCGGCGGCAAAGTGTCCGTCAAGCGCGCCATCTCCGACCCGGGCAGATCCTCGCAGCAGATACAGCTTCAGTTCCAGCCCGGCGATGCCTTCGCGCTCGCTGGCGTCACGTACCAAGCTGAAGATGTGGGATACCTCTCGCCCAGTCTCCAAGAGGATGTGTTTCACCAGGTGCAGGATACTATGCTGTTGCAGGGAGTCGATGCACAGCAACTTGTTCAGTTTCAAGCGTCCTTGCTACAAGAGCAAGATGAACAATTGCAGGATATTGCTTCGTTGGAGGATTACGCGACGGTGACAGCTAGTTTACAAGAGACCGTGGTTGATTCTGCGACATATCAAGCCAGACAAGTAGTGAACCAAGAGCTGCAAGCGGTGCTGGATTCACCGTTGCCAGAGAGTTTAGCGGAGTTCAGTACTTTCCACACCAGCAACCTGGACATGCCGTCGCCTTCATACCAGACACAATCACCAGCGCAGCAGTTTACGAACTCGCCGCACACGTCTCTAGCAGCGCAGTCTCCACTGCAGTCGCCGCTGATCCGGCACGACTCCCCCGGGTTCGCGTACCCCACCCCGCCGGCGAGCCACGAGGGACAAAGTCCATCGTTCGTACAGACATCGCTATTACCGATGATTTCTCCACAGCAAACGTCTGACTTCGTACAGAATGTCAGCACAACGAGAGATCCGGAGGAACCTCCACAAGCGTCATCACCACTCTCGGCAGCATTCTTCACATCAACGATGTCGAGTGCAGCGGCTGTAGAAGAGGCTTTAGAAGAAGTATTGCCTGGTGAAAGTATAGCACCTGATGATATCTACCCTTCTTTATCAAACTCACCGCCTCCACAATCACCCATCTCTGTCGCAATGACTCCCGTTCCATCTCCATTATCAAGTATACCTACCTCTACGACTTCCGTATCTTCTCCAAGGCCGCCTGCGTCGTTCACGCCGGTTTCAACAAACATCACGTTTCCAATGTCACCTCATTATACATTACAGTCTCAAATGATGCCTAACTCGGATGATCCGTTGTTATCCAGTAGTCCTAAGGACTTCTCAACAAGGAAACGGTTCGAATTCGGTAGTTTACAATCTTTGAAGATTGTAGGAAATGGATACATCGATTTTGGAAACCCCAATCTTGCTGGAATACTCGTAGACAATAATGGCGAGTTGAAATTTATTCAGACTTCAGGAAGTCCTATTCAAGCAAAGAATCTTATAGTTACATCAAATATAACATCTCCAAATACAACGATtaaggaagaaattaaaaatgttcctCTGCAAAGGTTGCAGAAAATTAGTAAAACAACGCAGTGTACAATACCAGCGAACAAGAATAATATTCAGAGGCCTAAGCTGCATGTTGCAGTCGACAATGTCAAAACTGAAGAGGCGGATGATGTTTTTCTCAGTCCAACAACCATTCCGGCAAGTCCGAATAGAATATCACGGAAGAGGCCGCGATCGGAACCACTTCAACTTCCAGTTGTCCATCAATCGCGTCTTCGAGCAGCACGAGGGCGACCGCCTGGTGCAGCTCCTTACACCCCTTTGCCGATGTTAAATCCTTCGCGGCACGGGCCCGGACTTTACTGGAATGCCAAACTTAAAAACACAATTGCAGCCAATTCTCTAaATAACCAAGATGATAGTTCTATATCATCGACCTGTGAATCAATCCCAGAGAGTGATTCAACCCCTCATATAAACGTTGGTTCTCAGTATCAATGTACAGTACCTCCATGTAAGTTAGGAAGAGATAGAGATGATAGGGAACCGACGTACGAGCACCTTCTTTGGGACCCTGGTATCAACAATTATTGCACGGATAATGAAGttgACATGTACTTGGATTTCGCGTGCTGCGCGGCAGTTCCCGGTGGCGGCCGAAATAAAGAGTACGCTTTACATTTGCTTCACATGTGTGGTGGAAACATCCATGAGGCAATGCTGAAGTTAATGCAACCAACGCCTACGTTACCACCTGATCACCCGCTTCTACACTATCATTACTCCGAGAGTGATCAGTGGACGATAGCAGAAACAGAAGCTTTCCACCAAGCCATTCAGAAACATGATAAAGACTTCTTCAGCATTGCTCAAGAGATTGgttcaaaaactgtaaaacaaTGTATACAATTCTACTATGTCTGGAAGAAAGTTTGTGTGGATGAATACAGACGGCTCCGGTTAAATCGGGAACAAAGAGGTTATGTGAGTGGTAAATCAAATGCTGATGTCGACTTTGAAGAGAAGCCCTGTTTAGATACCAAATTACTTGGTATTGCTGAAACAGAGTCTCCCATGTCCGTGGCAGATCACAGGCATTTTAGCTGCGATTATTCTGATTGTTCAGctAGTTTCAACTCTCGGGCAGCTTTGACGGGTCACATTCGAATTCACGGTGGCGCGGTTCGTCGATCACCGACTCCAACCTCCCACTTAGAGAGGCGAGTAAACAGTCTCACGCCCACGCCCGTCACGGCGGAACTTTCGGAAGAGTTCCCCTGCAAAATATGCGGGAAAGTGTTCAGTAAGATAAAAAGCAGAAGCGCGCATATGAAGTCCCATCGACCACCAGACGTGGACCAGAAGAAGAAGAGCACCGAGTATCTGCCTGGCCTAGTTCCTGACACGACCATATCAAGTCCAGCCGCGCATGCACCGTGA
- Protein Sequence
- MDQWIPYYYRFYQSQQTSSTKSNTSSSGSNPSQVKSTNATSSGATVAAASSGPTSTSSTTAAAAVAKPELKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKESTGPPLQTASVSVRALIEEKIISKRTTNPAVTQQSSGSGPAAAASGSGGGAPATTPTESTAPPLYPLSMHSTGDADASAKVTSFVVPAPPAPQPAAAAAAPAPAAARRHSDAEFTVPRAPATAAVQQEAEALADMILKRGGKVSVKRAISDPGRSSQQIQLQFQPGDAFALAGVTYQAEDVGYLSPSLQEDVFHQVQDTMLLQGVDAQQLVQFQASLLQEQDEQLQDIASLEDYATVTASLQETVVDSATYQARQVVNQELQAVLDSPLPESLAEFSTFHTSNLDMPSPSYQTQSPAQQFTNSPHTSLAAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPSFVQTSLLPMISPQQTSDFVQNVSTTRDPEEPPQASSPLSAAFFTSTMSSAAAVEEALEEVLPGESIAPDDIYPSLSNSPPPQSPISVAMTPVPSPLSSIPTSTTSVSSPRPPASFTPVSTNITFPMSPHYTLQSQMMPNSDDPLLSSSPKDFSTRKRFEFGSLQSLKIVGNGYIDFGNPNLAGILVDNNGELKFIQTSGSPIQAKNLIVTSNITSPNTTIKEEIKNVPLQRLQKISKTTQCTIPANKNNIQRPKLHVAVDNVKTEEADDVFLSPTTIPASPNRISRKRPRSEPLQLPVVHQSRLRAARGRPPGAAPYTPLPMLNPSRHGPGLYWNAKLKNTIAANSLNNQDDSSISSTCESIPESDSTPHINVGSQYQCTVPPCKLGRDRDDREPTYEHLLWDPGINNYCTDNEVDMYLDFACCAAVPGGGRNKEYALHLLHMCGGNIHEAMLKLMQPTPTLPPDHPLLHYHYSESDQWTIAETEAFHQAIQKHDKDFFSIAQEIGSKTVKQCIQFYYVWKKVCVDEYRRLRLNREQRGYVSGKSNADVDFEEKPCLDTKLLGIAETESPMSVADHRHFSCDYSDCSASFNSRAALTGHIRIHGGAVRRSPTPTSHLERRVNSLTPTPVTAELSEEFPCKICGKVFSKIKSRSAHMKSHRPPDVDQKKKSTEYLPGLVPDTTISSPAAHAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00767655;
- 90% Identity
- iTF_01226217;
- 80% Identity
- iTF_01226217;