Pnob053813.1
Basic Information
- Insect
- Poecilobothrus nobilitatus
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_947095535.1
- Location
- OX352774.1:9453034-9456121[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2 7e+04 -7.8 5.6 15 19 147 151 146 151 0.81 2 15 0.68 2.4e+04 -2.6 0.9 4 10 182 188 182 188 0.91 3 15 3e-08 0.001 20.9 17.0 1 19 196 213 196 213 0.99 4 15 2.8e-08 0.00099 21.0 13.1 1 19 249 268 249 268 0.97 5 15 1.2e-08 0.00043 22.1 13.7 1 19 303 321 303 321 0.99 6 15 7.1e-09 0.00025 22.9 9.4 1 18 357 374 357 375 0.97 7 15 0.18 6.3e+03 -0.8 0.5 1 10 384 393 384 393 0.75 8 15 0.012 4.3e+02 2.9 14.2 3 18 411 426 409 427 0.91 9 15 2.4e-08 0.00083 21.2 12.6 3 18 438 453 436 454 0.91 10 15 2 7e+04 -4.7 12.0 9 19 500 510 493 510 0.88 11 15 0.071 2.5e+03 0.5 4.7 3 12 523 532 513 532 0.85 12 15 0.32 1.1e+04 -1.6 0.9 6 10 591 595 590 595 0.90 13 15 0.00026 9.2 8.3 6.3 1 11 601 611 601 612 0.96 14 15 8.3e-05 2.9 9.9 12.0 3 19 641 657 640 657 0.94 15 15 1.5e-06 0.053 15.5 11.6 1 18 708 727 708 728 0.90
Sequence Information
- Coding Sequence
- ATGAACAAAAAAGGAAACAATAGTCTTGTAAACAGCATAACAAAAAAAAAAGATAAGCTTCATATTACAAAAAACTGTAAAACATCTGACAACTATGAATCTAGTTCAGAGGAAGAAGATGTAAACGAAGTTTCTATTTTGAATCAAGTATTTCAAAGCTATTCTGGTGAAATAAGTTTAATTTCAAAAACTAGATTTTTTTTGGAAAATTTTTTTCAATCTGGTTCAGCTATTTGCTTAATATGCATTGAAACAGTGAAAAGAGTTCAACCAATATGGTCTTGCTCTAATTGTTACTGTTTTTTTCACTTCAATTGTATAAAACGGTGGGCTAATGATAGCATTATACAACAAAAATTAAGTGAAGATCAAGAAGTAGGATATTATAACAATCAAGGAGAATTTATACCAAAGAAAATAAAACTAGTACGATGGTGTTGTCCTAAATGTCGTCATGAATATGCTTCAGAAAATATTCCAAAATTATATGAATGTTTCTGTAAAAAAGAGGTAAATCCACAATATCATCCTTGGTTACTTCCACATTCATGTGGTGAGCGATGTGAAAAATATTTGATACCTTATTGTGGACACAAGTGCTTATTACTCTGTCATCCAGGACCATGTCCACCATGTCCACAAAATATATCTTTATCTTGTCAATGTCGTAAATCTAAACCTATAACGGTTCGCTGTTTTAATAAAATTTGGAACTGTGAAATTAAGTGTCAAGAGAAATTACTTTGTGGAATTCATAAATGCGACAAATTTTGTCATGAACCTGGAAAATGCCCTCCTTGTAAAAAGCAATCCAAACAAAAATGCCAGTGTGGTAATGAAAGCGCTCAACGAAATTGTTCTGAATCAACTTGGCATTGTAAAATGGTATGCAATAAATTGTATTCTTGCGGTTTGCATAAATGTAGAAAAATTTGTCATTCTGGAAATTGTGGTGAATGCCCATTAGGTTTACCAAGAGCATGTCCTTGTGGTAAAAATCAGAAAGTAATTGCTCCTTGCAGTGAAATTGTGGAACCATGTGGTGATAGTTGTCAGAAGGTATTAGATTGTGGTATTCATTATTGTGCTGAACGATGTCATAAAGGAAATTGCAGTCAGTGCCTTGTTATTGTACAAAAGAAATGTAAATGTGGGTTACATACAAAGGAATTACCATGTTCAAAAAATTTCGCTTGCGAAACTAAATGTAAATTGATGAAAGATTGTAGAAAACATCTTTGTAACAAAAAATGTTGCGATAGCCAATGTCCGCCTTGTGATAAAATTTGTAACAAAACTCTTTTATGTAAAAAGCATAAATGTAAATCTGTTTGCCATGAAGGACCTTGTTATCCATGCGACTTAAAATCATCGGTTAAATGTCGCTGTGGAAATACATCCATTGTTGTACCTTGTGGCAGGGAAAGGAAAGTTCGGCCACCTAAATGTTTGTTGCTTTGCAGAATACCGGTTAAATGTCATCATGAAAATCCACATCGTTGTCATATGAATGAATGTCCACCTTGTACACAAAAATGTGGTCTTAGAAATGATACAACCAACTGCGAGCATCCTTGTGATGCAAGATGTCATGATGCTGTTAAAGTTGAATTAAAACAGCCAAAAAGCACAAATATTTGGGAGTGGAATTCGGATACTTTTGAATATAAAAAACTACCTCATCCCAAATGTGAAATTAAAATAATGGTACCTTGTATAGGAGGCCATGAAATTGCTGCTTGGCCTTGTTGGAATTCAAAGCCAACATCATGTCAAAGACTTTGTCAGAGGCTTTTAAAATGTACCAATCATAAATGCACTAGAGTTTGCCACATTGTTCCAAATTTAGACAATAAAGAGGAACAAGATGGATGTATTTCATGTTTAGACCCTTGTCTAGTAAAAAGACCAACAGGTTGCATTCATAAATGTAAGCGGCTCTGTCATCCACCACCATGTGATATGTGTTCAGCTCATATTAAAACTGCTTGTCATTGCGGTATCACACAAGTTATTTATAAATGTAGCGAGTTTTATTCCTCAGTATTAAATATAGAAGAATTAAAACAAAATCAAGAGACATTAAAAAGTTGTGGCAATCGTTGTATTCGAAATTATGCATGTGGTCATCGCTGTTTATCTAATTGTCATTCAGGTCCTTGTCCGAATGCTGAATCTTGTAAAAAGAAAGTTAAGATATATTGCGATTGTAAAAACCTAAAATTAGAAATTTCTTGTGAGAAATACCGGAAGGGCATGAAAGAATTAATTTGTGATGGAAAATGCGAAGAAAAGAAAGCTCTTGAAGAACGCTCACGTAAAGAAGAAGAAGAAAAGCTGAAAAAACTTGAAGAAGAAAAGAATCGAATTGAATTAGAATTATATGAAAAAAAATTCGGCAAGAAAAAATATCGCGAAAGAAAAGTTGTTGAACGTCCAACAAAGAAAAATATAGACATTAAACTAATAATTCTAGCAAGTGTTATCGGTGTCATTTCTATAACTCTAATGATTTATTTGTTGTGCTAA
- Protein Sequence
- MNKKGNNSLVNSITKKKDKLHITKNCKTSDNYESSSEEEDVNEVSILNQVFQSYSGEISLISKTRFFLENFFQSGSAICLICIETVKRVQPIWSCSNCYCFFHFNCIKRWANDSIIQQKLSEDQEVGYYNNQGEFIPKKIKLVRWCCPKCRHEYASENIPKLYECFCKKEVNPQYHPWLLPHSCGERCEKYLIPYCGHKCLLLCHPGPCPPCPQNISLSCQCRKSKPITVRCFNKIWNCEIKCQEKLLCGIHKCDKFCHEPGKCPPCKKQSKQKCQCGNESAQRNCSESTWHCKMVCNKLYSCGLHKCRKICHSGNCGECPLGLPRACPCGKNQKVIAPCSEIVEPCGDSCQKVLDCGIHYCAERCHKGNCSQCLVIVQKKCKCGLHTKELPCSKNFACETKCKLMKDCRKHLCNKKCCDSQCPPCDKICNKTLLCKKHKCKSVCHEGPCYPCDLKSSVKCRCGNTSIVVPCGRERKVRPPKCLLLCRIPVKCHHENPHRCHMNECPPCTQKCGLRNDTTNCEHPCDARCHDAVKVELKQPKSTNIWEWNSDTFEYKKLPHPKCEIKIMVPCIGGHEIAAWPCWNSKPTSCQRLCQRLLKCTNHKCTRVCHIVPNLDNKEEQDGCISCLDPCLVKRPTGCIHKCKRLCHPPPCDMCSAHIKTACHCGITQVIYKCSEFYSSVLNIEELKQNQETLKSCGNRCIRNYACGHRCLSNCHSGPCPNAESCKKKVKIYCDCKNLKLEISCEKYRKGMKELICDGKCEEKKALEERSRKEEEEKLKKLEEEKNRIELELYEKKFGKKKYRERKVVERPTKKNIDIKLIILASVIGVISITLMIYLLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -