Basic Information

Insect: Poecilobothrus nobilitatus
Gene Symbol: Ptchd3_1
Assembly: GCA_947095535.1
Location: OX352773.1:207936980-207948709[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 6.6e-05 0.011 18.0 1.5 3 23 1563 1583 1561 1583 0.96

2 5 2.1e-06 0.00034 22.8 1.6 1 23 1589 1611 1589 1611 0.99

3 5 0.00043 0.071 15.5 3.2 1 23 1617 1639 1617 1639 0.98

4 5 0.0016 0.26 13.7 5.2 1 23 1645 1667 1645 1667 0.99

5 5 0.01 1.7 11.2 3.1 1 22 1673 1694 1673 1697 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	6.6e-05	0.011	18.0	1.5	3	23	1563	1583	1561	1583	0.96
2	5	2.1e-06	0.00034	22.8	1.6	1	23	1589	1611	1589	1611	0.99
3	5	0.00043	0.071	15.5	3.2	1	23	1617	1639	1617	1639	0.98
4	5	0.0016	0.26	13.7	5.2	1	23	1645	1667	1645	1667	0.99
5	5	0.01	1.7	11.2	3.1	1	22	1673	1694	1673	1697	0.89

Sequence Information

Coding Sequence: ATGGGAATAACAAAGACAATTTCAAACAAAATAACAAATGCAATTGCAAATACTTTTTATAGAATTGGTTATACAATTGCTTGCAATCCATGGAAATGTATACTAATAACATTTTGTATATTTGGAACATGCTGCTTCGGATTTTTAAAATTTGAAATACAAAAAGATCCACTGGAATTATGGGTACCAAGAGATTCACAATTTATACGCACAACAAAATGGATGTTAAGTAATTTGAATAGTGCATCGCGTATACAAACGGTACTTGTTACAGCACCAAATGTTTTAGAACCATCAGTATTAAATAAATTATTAATTATACATCATGAAATTGAAAATATTAGTGGAACATTAAGTAATGGGACATTAATTAAATGGTCTGATGTTTGTTTAAAAATACCTTTTATATCCCAAGTTAATGCAAAGAAAAAAAGAAGAAAACGAGATACTGAAAATAGTAGTAGTGAAGATTCATTTTTAGATATTTTTGGAATTGGTTCCTTAATAAAAAATATTCAAAAAGAATTCGAACCCAGTGTTGATTTACCATCAATAATTTATTGTAGACTTTTAAATAATTTACCACGTGGTTGTTTAGAAAAAAATCTTCTAGAATTATTTAATTATCGAGAAAATTTCAATGAAAATACAACGCTTAAAGAAGTTCAAAGTTTATTAAAACGTAATGAAACAATAAGTCCAGTTACTGGTCATCTAACTGATTTTAGTGAATTATTAGGTGATATAGAAAGAAATGAAAATGGACAAATTATTGGAGCAAAAGCAATTCTTATTCAATGGGTTGTTAATTTAAATTTAGATGATGTTGGTAAACAAAATCTTGGTAATTTAGCGGGAACTGAAAGTTGGATTACTGAAGAATCAGCTGTATGGGAAGAAGCATTTTTAGATAAAATGAAACAATTAAAACTAGAATTAGATGATAACAATACAAAAATTTATTATAATGCTGAAAAAAGTTTCGGTGATATAAGTAATCAAGCATTATTTCAAGAAAGTAATAAAATTGCAATAGGAATTATTATTATGTTTATATATGTACAAATAATTTTATCAAAATACAGTTGGACTGAATTAAGAGTCGGACTTAGTTCAATAGGTTTGTTGTCAGTAGTTTTAGCATTTTTATCAGCATGTGGTATTTGTTCTGTCCTTGATATTAATTATGGTCCGGTTCATACATCATTACCATTTTTATTAATGGGTTTAGGGGTAGATGATATGTTCGTTTTAATGGCATGTTGGAGAAAAATACAACACGTAGATGCTTCTATTGAAGAAAGAATTGGTTTAATGGTAAAGCATGCTGGCGCTTCAATTACTGTTACATCATTAACTGATATTATAGCATTTTTAGTAGGTGCTTCAACGGTAATACCATCATTACAATCCTTTTGTTTATATGCAGCTGTAGGAGTTTTCATGACATATTTTTATGCAATCATATTTTATGTAGCAGTTTTTACATTAGATGAACGTCGTATTAAAGCAAAACGAAATTCATTTATACCATTTATTGTGCATAAAGATGAAAATTTAAAATATTTCTGTGATTTGAATTTAATGAACAAATGTTTAAATATAATTTATGGAAAATTTATATTAACAAAATATGGAAAAATAATTATTTTTATGACTGTGATAGGTTTAACTGCACTCAGTAGCCAATGTTTATTAAAAATTGAACAAAAATTTGATCCAACATGGTTTATACCAGAATCCACATATTTACATAATTATTTAATAGAAACTAAAAAATATTTTCCTGAATCAGGATATACTGGATCTGTTTTTATGGGAAAACTTAATTATACTGATGTATTACCAGAAATTTACAATTTAACAAGTGAAATTGAAAGAAGTGATATGTTTTATAAAACAAAATCATGGATAAAACCATTTCAAGAGTTCGTAAAAAAAAATTATAAAATTGATATTTATAAGGATTATATAAGTGATTATGATTTCAAATTTTATCTATCAAAATTTTTATTTAGTGCAAAAGGTGGAAAATTTCAAGCAAATTTTAATTTTGAACAAAAATTAGAATGTGGTGAGCCAACTCCAAATATTTCAGTTTCTTGGATTGATTTTCGTTTTAAAAAGTTTTCACATCGAGATGATTATTTACCTGCAATGAGATCTATTGATATGATGGTAAAGCAACAGTACTTTAATGAAAGTGGTGATGGCTTTGCAGAACCATGGTCAAGAGCTTATGGAAATTGGATAACAGATGAGATTATTGACCGGGAAGTATTTCGAAATATAATTTTGGCATTAATTTGTGTAATGTTTTGTACTACAGTTATAATAGTAGATGTACAAGTATGTTTTTGGATATTTATATGCGTGCTAATAACTCTGATTAATGTAGGTGGTTTTATGCAAATTTGGGGTTTAACGATTGATTTAGTTTCATGTATTGGATTACAGTTGGCAGTTGGCTTATGTGTTGATTATGCGGCACATATAGGTCATACATTTTTAGTTTGCTCTGAAGGAGATCGAAATAAAAGAGCTTTAGATACAATTTTACATATTGGAGCAGCAGTTCTATATGGTGGAGGATCAACTCTTTTAGCCCTTCTATTACTTTCTCAATCAGATGCTTATACATTTAAAGCATTCTTTAAAATATTTTTTTTAATTATTGTGTTTGGTCTATTTCATGGCATTGTATTGTTACCTGTTATATTAAGTTTAGTTGGTCCGAAATCATACAGAAAATCTAAAACAAGCAATTATTTAAAAAATTCTGTTAATTTTAATAAAGAAGAAGAAATGAAACCAATGAAAAGTCACAATCATAATACGCTCACTGAAAAATCTCAAAATAAAACTACAGAAAATTCTAAATTAAATGATATTCAAAAAACTAATTATTTACCAGAAAGAATTTGTTCAACATGTATTAGAATTTTAAATTTAGCATATGTTTTCCGGTTAACTTGCCAAGAAACTGACATTAAATTGAAAAAATCTGCATTTGCAACAAATATAGCTCAAGTGATTGAAACGAAATCTAACTTGCCTCAGCTTTTGAATGAAGTCGAAGAAGATTTTGATGAATTTCAAGAATTTTCAGAAAATGAAGATAAAGCTTCCGCGAATTATGACCAACTACACAAAAAGACAAAATATTCAGATTGTAAAATAGAGACAAAACCAAGTAAAAAATATTCTAACACTAATAACAATTATGTTGCCGAATATAAATGTATACGTCGAACTAATGATAAAGAACTGGTCAGGTGTACCACTTGTAAATGTAAATTTTCTATTATCTATGGAGGACGTTCAGATATTATTAGGCATATTAATTCCAAGAAACATAAAGAAAATACAGATCCTTTAACAATGCCAGATTTGGAACCAGAATCGCCAGGCAATTCTCGAAAACAGGATAAATCCATTTCTACAGCTTTCTTGAATGATGAATCATTTTGTTGTTCAGATGAAGAATCAAAGTATACAAATTTTTTTAAAGTCAAAAGAGAAACCTCTAAAGAAAATTTGAACAAAAGAAAAATTGTGTGGAACGACGATGAAGAAAAAATATCAGCAATGATTACAGAGGAACACAAAAATAAATTAATTAAGCTTCAAGAAACAGCTAACCAAATACTTTTATATGAACGTAAAATTTTCGAAGAGGTAGTTTCATTACACCAAAGAAATTCTAGCGAATCTGAAGATATGGAAATAAATAAATTAAAACTGCCAATCCAAACAAAAGAAGATTTAATAGATTTGGAGGAAAGTTTGAGCAATGATGTTGAAATAAAAAGATGTTTGAAATCATCATTTATAAAAAATACTAACGATTTAACAAAATTTGTACAACTCAATTTAAAAAATATTATGACCGATGCTGTTGCGTCAAATTTTTCATGGTTTGGCCATCAAAATAATATAGCAATAAAAGATTACTTGATAATTAAATTATTAAAAGATACAGCTTTAATTTCATTTAACAAATCATCTGAAAATGAAATTGAGAAAACTAATTATTTACCAGAAAGCATTTGTTCAAAATGTATTAAAATATTAAATTTAGCTTATGTTTTCCGATTAACGTGTCAAGAAACTGATATCAAGTTAAAAGAATCGGCATTTACAACAGATATTGTTCAAATAGATGTAATTAAAACTGAATCCAATTTAGATCAACTATTGGAAGAAGTAGAGAAAATTTCAGAAGAACAACTTGATGAAGATAATAAAAATCTATTTGAATATTCAGAATTTTTATCGGTTCATGATAGTGCTGATACACCAGACAATGAAGATGAGAAAGAACAGGACAACAAAAAAAGTGAAAACAAACATACCGATGCAAATTTTCAACAATTACGCAAAAAGAAAAGACATGCAGAATGGAAAGAAAGAGCTAAACCAGCAAATAGAAGATTTTGTAAATTTAATAAACAATGGTTTGATGAATATAAATGGATACAACCAGGCGAAGATGAATATTATGCCAGTTGTTCTATATGCAAGTGTCAATTTTCTATTAGTCATGGAGGACGTTCTGATATTGCTAGACATATTAATACTGAGAAACACAAACAAAATACAGATCCATTGTTAGTAAAACAAAAAGTATTTCGTGGTAATGGAATAAAAGTTGCACAAAATGTTGAAGAAATTACATACATAATTTGTGAAATTTGTGGCAATAAGTATCCATCTAAAACACATTTAAGAAGACATATGAAATATCATTCTGATATTTTGGAATACGAGTGCGAAATATGTCAAAAGAAATTTAGATTATCAATGCAATTACGAAAACACATGCGAGTACATACAGGAGAAAAGCCATATGAATGTAAATTTTGTGGAAAGCGCTTCACAGATTTCAGTTCAAAATTAAAACATGAACGCTCACATACTAATGAAAGACCGTATAAGTGTGATACATGCGGCAAAACATTTACTTCATCTGGAGTTTGCAAAAAGCATAAAAGAACTCATACAGGAGAAAAACCACACCATTGTGAAATTTGTGATAAAGGTTTTGCAGAGAAGACCCAATTAATGACTCATTTTAAGTCGTTCTTACACCAAAGTCGGGAAGCGATTGCTATAAAAAATGCAATTAAATTAGAGGCTGAATAA
Protein Sequence: MGITKTISNKITNAIANTFYRIGYTIACNPWKCILITFCIFGTCCFGFLKFEIQKDPLELWVPRDSQFIRTTKWMLSNLNSASRIQTVLVTAPNVLEPSVLNKLLIIHHEIENISGTLSNGTLIKWSDVCLKIPFISQVNAKKKRRKRDTENSSSEDSFLDIFGIGSLIKNIQKEFEPSVDLPSIIYCRLLNNLPRGCLEKNLLELFNYRENFNENTTLKEVQSLLKRNETISPVTGHLTDFSELLGDIERNENGQIIGAKAILIQWVVNLNLDDVGKQNLGNLAGTESWITEESAVWEEAFLDKMKQLKLELDDNNTKIYYNAEKSFGDISNQALFQESNKIAIGIIIMFIYVQIILSKYSWTELRVGLSSIGLLSVVLAFLSACGICSVLDINYGPVHTSLPFLLMGLGVDDMFVLMACWRKIQHVDASIEERIGLMVKHAGASITVTSLTDIIAFLVGASTVIPSLQSFCLYAAVGVFMTYFYAIIFYVAVFTLDERRIKAKRNSFIPFIVHKDENLKYFCDLNLMNKCLNIIYGKFILTKYGKIIIFMTVIGLTALSSQCLLKIEQKFDPTWFIPESTYLHNYLIETKKYFPESGYTGSVFMGKLNYTDVLPEIYNLTSEIERSDMFYKTKSWIKPFQEFVKKNYKIDIYKDYISDYDFKFYLSKFLFSAKGGKFQANFNFEQKLECGEPTPNISVSWIDFRFKKFSHRDDYLPAMRSIDMMVKQQYFNESGDGFAEPWSRAYGNWITDEIIDREVFRNIILALICVMFCTTVIIVDVQVCFWIFICVLITLINVGGFMQIWGLTIDLVSCIGLQLAVGLCVDYAAHIGHTFLVCSEGDRNKRALDTILHIGAAVLYGGGSTLLALLLLSQSDAYTFKAFFKIFFLIIVFGLFHGIVLLPVILSLVGPKSYRKSKTSNYLKNSVNFNKEEEMKPMKSHNHNTLTEKSQNKTTENSKLNDIQKTNYLPERICSTCIRILNLAYVFRLTCQETDIKLKKSAFATNIAQVIETKSNLPQLLNEVEEDFDEFQEFSENEDKASANYDQLHKKTKYSDCKIETKPSKKYSNTNNNYVAEYKCIRRTNDKELVRCTTCKCKFSIIYGGRSDIIRHINSKKHKENTDPLTMPDLEPESPGNSRKQDKSISTAFLNDESFCCSDEESKYTNFFKVKRETSKENLNKRKIVWNDDEEKISAMITEEHKNKLIKLQETANQILLYERKIFEEVVSLHQRNSSESEDMEINKLKLPIQTKEDLIDLEESLSNDVEIKRCLKSSFIKNTNDLTKFVQLNLKNIMTDAVASNFSWFGHQNNIAIKDYLIIKLLKDTALISFNKSSENEIEKTNYLPESICSKCIKILNLAYVFRLTCQETDIKLKESAFTTDIVQIDVIKTESNLDQLLEEVEKISEEQLDEDNKNLFEYSEFLSVHDSADTPDNEDEKEQDNKKSENKHTDANFQQLRKKKRHAEWKERAKPANRRFCKFNKQWFDEYKWIQPGEDEYYASCSICKCQFSISHGGRSDIARHINTEKHKQNTDPLLVKQKVFRGNGIKVAQNVEEITYIICEICGNKYPSKTHLRRHMKYHSDILEYECEICQKKFRLSMQLRKHMRVHTGEKPYECKFCGKRFTDFSSKLKHERSHTNERPYKCDTCGKTFTSSGVCKKHKRTHTGEKPHHCEICDKGFAEKTQLMTHFKSFLHQSREAIAIKNAIKLEAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -