Basic Information

Insect: Poecilobothrus nobilitatus
Gene Symbol: L_1
Assembly: GCA_947095535.1
Location: OX352773.1:88493967-88510829[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.9e-05 0.0031 19.8 1.0 1 23 318 340 318 340 0.98

2 19 0.91 1.5e+02 5.0 5.7 1 23 346 368 346 368 0.98

3 19 5e-07 8.1e-05 24.7 3.1 1 23 374 396 374 396 0.99

4 19 5.3e-05 0.0087 18.3 0.2 1 23 402 424 402 424 0.98

5 19 0.63 1e+02 5.5 0.9 3 23 498 520 496 520 0.87

6 19 0.23 37 6.9 0.5 2 23 580 602 579 602 0.93

7 19 0.14 23 7.6 1.8 1 23 722 744 722 744 0.95

8 19 0.035 5.6 9.5 1.7 3 23 753 773 751 773 0.96

9 19 0.024 3.9 10.0 1.7 1 23 781 805 781 805 0.90

10 19 0.046 7.6 9.1 0.1 1 20 810 829 810 830 0.94

11 19 0.064 10 8.6 0.8 1 23 840 862 840 862 0.98

12 19 0.00037 0.06 15.7 0.9 1 23 896 918 896 919 0.96

13 19 3.1 5.1e+02 3.3 0.4 1 23 1120 1144 1120 1144 0.88

14 19 0.0065 1.1 11.8 3.6 2 23 1153 1175 1152 1175 0.94

15 19 0.25 41 6.8 0.1 1 23 1181 1203 1181 1203 0.92

16 19 7.1 1.2e+03 2.2 0.8 2 23 1211 1232 1211 1232 0.97

17 19 3.4 5.6e+02 3.2 1.8 2 23 1342 1363 1341 1363 0.94

18 19 0.012 1.9 10.9 0.1 1 23 1373 1395 1373 1395 0.98

19 19 0.65 1.1e+02 5.5 1.2 1 23 1402 1424 1402 1424 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.9e-05	0.0031	19.8	1.0	1	23	318	340	318	340	0.98
2	19	0.91	1.5e+02	5.0	5.7	1	23	346	368	346	368	0.98
3	19	5e-07	8.1e-05	24.7	3.1	1	23	374	396	374	396	0.99
4	19	5.3e-05	0.0087	18.3	0.2	1	23	402	424	402	424	0.98
5	19	0.63	1e+02	5.5	0.9	3	23	498	520	496	520	0.87
6	19	0.23	37	6.9	0.5	2	23	580	602	579	602	0.93
7	19	0.14	23	7.6	1.8	1	23	722	744	722	744	0.95
8	19	0.035	5.6	9.5	1.7	3	23	753	773	751	773	0.96
9	19	0.024	3.9	10.0	1.7	1	23	781	805	781	805	0.90
10	19	0.046	7.6	9.1	0.1	1	20	810	829	810	830	0.94
11	19	0.064	10	8.6	0.8	1	23	840	862	840	862	0.98
12	19	0.00037	0.06	15.7	0.9	1	23	896	918	896	919	0.96
13	19	3.1	5.1e+02	3.3	0.4	1	23	1120	1144	1120	1144	0.88
14	19	0.0065	1.1	11.8	3.6	2	23	1153	1175	1152	1175	0.94
15	19	0.25	41	6.8	0.1	1	23	1181	1203	1181	1203	0.92
16	19	7.1	1.2e+03	2.2	0.8	2	23	1211	1232	1211	1232	0.97
17	19	3.4	5.6e+02	3.2	1.8	2	23	1342	1363	1341	1363	0.94
18	19	0.012	1.9	10.9	0.1	1	23	1373	1395	1373	1395	0.98
19	19	0.65	1.1e+02	5.5	1.2	1	23	1402	1424	1402	1424	0.95

Sequence Information

Coding Sequence: ATGGCTCTAAAAGCAGCTTTATATCGTGGTCCAAGTTCAAGACTTGAAACATTAATTGAAAAAATTCAAGCAAATAATAAGGAAATAAATTCTGATGCATGCTCTATACATACATCATCACCAAGTTTTTCACCATCAATATCAGAGGGAGCAACAACACCTAATTCAACATTAAGTCAGCAACGTCATCATAAATATCATAATTTTTcaagtggtggtggtgaaaatgatggtgatgatggtgatggttatattgatatcaacgatgttaatggcggtgataataataaaaAAAATTTGCATTATAATCACTATCCACAACAACAAACACAACAACCACCACCGCCTTTTAAATTTTTTTCATTATCTGATGAAGAAGCAACTGAACGTGAAAGTATTGGCGTTATTACTAATATTGAAGAAACAGAACGTAGTTATAGTTTACCACCATCATTTTTATCACCAACATCACCAACAATAGCATCAGGATCGGCATCAACAGGTTTAATAAATAAACGTTTAAATCGAAGAAGAGAACGACATTTATTATTtaataataataacaatcataattataattattatcatttacgtcgcccaattaatcatgatctattaatggatgataatgatggtgttggtgttgaaaatgttaatgtaaataacagaaaatctcaaaaatcaaataaaaaattaagaaataataaagaatcttcaattaataatgaaagaaatgatgaagataatgattatgatgatgaaacaaggacaacaacaacaagtgaaatattaaaaaatgataatgcagattatgttgatggcgatgatgataacagtgataataGGATTTTATTAAAGGATATATTAAAGAAAAATGCTAAATTAGCTGATAAAGTTAAAAATTGTAACGGTGGTTCAAATAATGGTACAACAACAACAACAGATGGTTCATATCCATGTCAATTTTGTGATAAATCATTTCCAAGATTAGGCTATTTAAAAAAACATGAACAAAGTCATGCCGAACATCTTCCTTTTAAATGTGAATATTGTGCTCGTCTGTTTAAGCATAAACGATCTCGTGATCGTCATACAAAATTGCATACAGGTGATCGTCGTTATCGTTGTCCACACTGTGAAGCTGCATTCTCAAGAAGTGATCATTTAAAAATTCATATGAAAACACATGATAATCAGAAACCGTTTCAATGTACAATATGCAATCGTGGTTATAATACAGCTGCTGCGCTTACATCACATATACAAAATCATAAAAAACAAGCAGCGCTTATGGGTACTGGTTTACAACCATTAAATTATAGCCCACGTTCAACTGGTTCAACGTCAAGTAGTGCTGGTAGTTTATTTGGTTTAAGACATCCTAAAAGTCCATTGTCAATGTCTGGTACTGATTATTGTGGTAGTAATACAGGCAGTCCAATACGTACAGATTCAAAACAATCATCAATGATGCATCATCAAAATTTAGCTTGTATGTATTGTACACAGAATTCATTTAATGATTTAGAACAATTAAATCATCATATTCAGATTACACATAAAAATTTATCAGGGAATGGTAATGGTAATGAATCTTTATCAAATGATGGTATTCAAAATCAAAAAACAACACCAACACCATCTACACCAACATTAACACCAAGAGCGACACCTACTCCAACATCAATAACACAATCTCTTACACCAATACCATCAGGAATGTTAAGTTTTCCAATGAGTTGTGATTATTGTACCATGAAATTTACAAATATTTCAATTATGTTTCAACATATGAAAGCAGCTCATATTGATCAAATGAAGATATCAAATTTTCAAGAAAATTTTGAAGGCTTACCAAATTCTTTTGGATTTCCATCGAATTTTGGTGGCGCTTCAACATCACCAATGATACCACCACCAACCATAGCAACAGATTGCTTTGATGACATTAAAATTAAAAAAGAAAGTCCGAGCCCAAATTCAAACAAACAACAGTCCGAAGGAGGGGATAATGGTGACAATTCAGCTGCTTTAGAAAAAGATGAAAATTTAATTCAATTACGGCCAACAGATTTAAGTCAACCTAAAAAACATTTAAATGTAACACCCACATCAAGTAATAACGAAAATAATTTAGCAAACGAAAAATTTTTTCAACGTACATTTTTATGTAATCAATGTAATGAAGCTTTGCCAGATTTTCATTCTTTTAGAAATCATTTAAAATTGCATATAACACAAAAAATGGGAATGATTTGTCAACATTGTGGTATAACTTTACATGATAAAAATGAATTGGATCGTCATGTAATGTCGCATTTTTTAATAGCAACTTCAGAATTTATTTGTTCAAAATCATGTAAAAAAACATTTACCAAAGTTGACGATTTAAGAACTCACCTCTTTGAACAACATTCACAAATTGTATACAAATGCACTCTTTGTACAGAAGTTTTTGATACTAAAATAGCTATTCAGGTTCATTTGTCCTGTACTCATGTTAATGAAACAAAAACATATCAATGTTCAGCTTGTATGAAACAATTTCGTAATGAAGAAGACTTTTCAATTCATGTTAAAAGTCATTTAACGCCACCGAACGGTTGTATTCAATGTATGTTTTGCCGAACTATTTGCACATCTCAATTAGAAATGCATTTTCATTTAGCAGCACATACACAACAGTTTCGATGCCCATCATGCCCAGAAACATTTCAAGTTGAATTTTTACTTGAACGGCATATACAAACTCATCATACAGTTCGTAAAGATCCTATGCATCACATTCAGCAGCAGCCGCAAGATTTGTTAAATGGACCGAAACATTTAATGCAAGAAGAATCTGAACAATATAGTGCAACACAGCAACAACGACAATCACCTAGTGGTTATTCTTCAAGAGGGAAAAGTTTATTTCAAATACCAAATTCTATTGGTATTAAACCAAATAATAAATTTTATTCTCCTTTACAAGTTAATATCAATGCGAATAGTAAAACACATTTAAAATATGGGGGTAGTGGTGGTTTAAACCAAAGATATGATGCAAAAAAATCTCTTTTAAATCTAATGTACAATAATTACCATCATCAACAGCAGCAACATCAACAAGATATCGAAAAATTAAATAATGATACATTTAATCATGGTTCAAACTTTTTACTTAGTCCAACAACATATTTTGATAATAATTATGACAACATGgcagcagcagctgcagctgcagcagcagttgttacatccaaacgtaatcatatagtggcaacaacagcaacTAATATAGAAAATCCATCAAAATCATCTAATTCAGCACAAACACAAGCAACTGCAACTGCTGAACGGAAACAAATTGTTGGTTTTAGTTGTGGTATGTGTGAACGTAATGATTTTCGTACTGAATCTGAAGTTAATACTCATCGTAAAATTGTACATAATTTAAAAACAGGTGTTAGCCTTAGATGTGCATATTGCAGTGGTAATTTTAAATCAAGAAGTGAATTAGAACATCATATGAAAGCATGTCATAATTCTATGGGAAAACATAAATGTTTAATATGTGACGAAATTTTCCCATCGCCAGCTATACTAGCTGAACATAAATTACAACATTCTAGAGTTGGTAGATCTGGTAAATGTGTTCATTGTTCGGCACCATTAAATGATATTGCAACATTTAAACTTCATTTATCAAAACATATAACAACCACCAAAGATCCAATCCAATGTATTTGTTGTCGTCAAACATTAAATTCCGATTTTGAAGTTGAATTACATGCTAGATATCATACAAAAACACCAAATGTCCCAGAAAATGGTTGTGTACTTTGTTTGGAACCATTACCATCAACAGCACAAACACGTTTATGTGAAAAATGTGATCTTAAGCATAAATATACAGCCAATAATTCATCTGTGACTGCAGCAGTAGTTACAGCAGCTACCTCTAATAATGCATCAACAGGTGGAATTCGATTCCCAACAACCAAATTACAACAACCAAATTATTCTGAATATTTAGAAAATAAATGTCATTTATGTAAGATCATTTTACCACATCAGCAACGATTACAAGAACATTTAGTTGAGCATACATTTGCTGGTTGTGAAGAACGTGGCTATTCATGTTATATTTGTTCATCAGTTTTTACAATACCAGGTGGTTTATTAAATCATATGAATGAGCATGGTCAAAATGCCAGACCATATGATTGTAATATTTGTCAAGATAAATTCTTTTTTAGAGCTGAATTGGATAATCATTTGTTTAAGCATCAATTAAATGATACAACAAAAACTGATTTTATTGACAAAACATTACAAATTCAATCAATTCAACAACCAATTGATATGATTAAAGCAAAAGAATTAAAAAATTATCATCATCCATCATCATCACATCATCACTCTGGTAATTTAGTTCAGAATCAAGTAGATCCAAAAAATCGAGATATTAAAGATTTAATAAAAAGTGATCAAAAGCCACTACAGCATGATAATCCTAAAAATTCAAGATTATCATCAGAAAATCATGATTATAAATTACACGATAATAATAATGATAATATTTTTAAAACTGAAATTAAAATTGAAAATAAATCAATAGATATGGAATCAAATAATATCACCAATAATAATAATGAAAATACAGCAGATATTAATAATGAAGAAGATGAATATGTTGAAATTGAAAAATTAGCTGAAAATACATCAACACAAGAACATTAA
Protein Sequence: MALKAALYRGPSSRLETLIEKIQANNKEINSDACSIHTSSPSFSPSISEGATTPNSTLSQQRHHKYHNFSSGGGENDGDDGDGYIDINDVNGGDNNKKNLHYNHYPQQQTQQPPPPFKFFSLSDEEATERESIGVITNIEETERSYSLPPSFLSPTSPTIASGSASTGLINKRLNRRRERHLLFNNNNNHNYNYYHLRRPINHDLLMDDNDGVGVENVNVNNRKSQKSNKKLRNNKESSINNERNDEDNDYDDETRTTTTSEILKNDNADYVDGDDDNSDNRILLKDILKKNAKLADKVKNCNGGSNNGTTTTTDGSYPCQFCDKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHIQNHKKQAALMGTGLQPLNYSPRSTGSTSSSAGSLFGLRHPKSPLSMSGTDYCGSNTGSPIRTDSKQSSMMHHQNLACMYCTQNSFNDLEQLNHHIQITHKNLSGNGNGNESLSNDGIQNQKTTPTPSTPTLTPRATPTPTSITQSLTPIPSGMLSFPMSCDYCTMKFTNISIMFQHMKAAHIDQMKISNFQENFEGLPNSFGFPSNFGGASTSPMIPPPTIATDCFDDIKIKKESPSPNSNKQQSEGGDNGDNSAALEKDENLIQLRPTDLSQPKKHLNVTPTSSNNENNLANEKFFQRTFLCNQCNEALPDFHSFRNHLKLHITQKMGMICQHCGITLHDKNELDRHVMSHFLIATSEFICSKSCKKTFTKVDDLRTHLFEQHSQIVYKCTLCTEVFDTKIAIQVHLSCTHVNETKTYQCSACMKQFRNEEDFSIHVKSHLTPPNGCIQCMFCRTICTSQLEMHFHLAAHTQQFRCPSCPETFQVEFLLERHIQTHHTVRKDPMHHIQQQPQDLLNGPKHLMQEESEQYSATQQQRQSPSGYSSRGKSLFQIPNSIGIKPNNKFYSPLQVNINANSKTHLKYGGSGGLNQRYDAKKSLLNLMYNNYHHQQQQHQQDIEKLNNDTFNHGSNFLLSPTTYFDNNYDNMAAAAAAAAAVVTSKRNHIVATTATNIENPSKSSNSAQTQATATAERKQIVGFSCGMCERNDFRTESEVNTHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKACHNSMGKHKCLICDEIFPSPAILAEHKLQHSRVGRSGKCVHCSAPLNDIATFKLHLSKHITTTKDPIQCICCRQTLNSDFEVELHARYHTKTPNVPENGCVLCLEPLPSTAQTRLCEKCDLKHKYTANNSSVTAAVVTAATSNNASTGGIRFPTTKLQQPNYSEYLENKCHLCKIILPHQQRLQEHLVEHTFAGCEERGYSCYICSSVFTIPGGLLNHMNEHGQNARPYDCNICQDKFFFRAELDNHLFKHQLNDTTKTDFIDKTLQIQSIQQPIDMIKAKELKNYHHPSSSHHHSGNLVQNQVDPKNRDIKDLIKSDQKPLQHDNPKNSRLSSENHDYKLHDNNNDNIFKTEIKIENKSIDMESNNITNNNNENTADINNEEDEYVEIEKLAENTSTQEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -