Basic Information

Insect: Poecilobothrus nobilitatus
Gene Symbol: ZFX_1
Assembly: GCA_947095535.1
Location: OX352774.1:101371576-101373639[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0016 0.25 13.7 0.7 1 23 183 205 183 205 0.97

2 11 0.0011 0.18 14.2 6.4 1 23 211 234 211 234 0.96

3 11 1.8e-05 0.0029 19.8 1.3 1 23 240 262 240 262 0.99

4 11 2.3e-06 0.00038 22.6 0.5 1 23 268 290 268 290 0.98

5 11 0.00032 0.053 15.9 2.5 1 23 295 317 295 317 0.95

6 11 0.0011 0.18 14.2 1.2 1 23 322 345 322 345 0.95

7 11 2.2 3.7e+02 3.8 2.7 3 23 351 369 350 369 0.95

8 11 8.3e-07 0.00013 24.0 0.6 1 23 375 397 375 397 0.99

9 11 2.1e-05 0.0034 19.6 0.7 1 23 403 425 403 425 0.99

10 11 0.0027 0.43 13.0 0.6 3 23 433 457 431 457 0.83

11 11 0.82 1.3e+02 5.2 0.1 1 22 463 484 463 484 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0016	0.25	13.7	0.7	1	23	183	205	183	205	0.97
2	11	0.0011	0.18	14.2	6.4	1	23	211	234	211	234	0.96
3	11	1.8e-05	0.0029	19.8	1.3	1	23	240	262	240	262	0.99
4	11	2.3e-06	0.00038	22.6	0.5	1	23	268	290	268	290	0.98
5	11	0.00032	0.053	15.9	2.5	1	23	295	317	295	317	0.95
6	11	0.0011	0.18	14.2	1.2	1	23	322	345	322	345	0.95
7	11	2.2	3.7e+02	3.8	2.7	3	23	351	369	350	369	0.95
8	11	8.3e-07	0.00013	24.0	0.6	1	23	375	397	375	397	0.99
9	11	2.1e-05	0.0034	19.6	0.7	1	23	403	425	403	425	0.99
10	11	0.0027	0.43	13.0	0.6	3	23	433	457	431	457	0.83
11	11	0.82	1.3e+02	5.2	0.1	1	22	463	484	463	484	0.94

Sequence Information

Coding Sequence: ATGGATTTAATAACAATCAGAAATATTGATGATTTACAAGTTAATTCATCAGCTGGTGATGCAAATGATAGTGCAGTTTCATTATCAGAATTATCAGAACAATCAATACAAAATTTATCAAGAATATCAAGTGAAAATGATTCTTTAATTAGTACAACAAATACAACCATATCAACAAAAACAGGAACAATTAAAACCAGATCATCTAGAAGAAAATCAAATATAATAACTACTGGAGGAACAACAATAACAAATGAATTTATACCATTAAAAATAGAAAAACAAAGACGTTCAACAGTTAATTCATCAATTACAGTACAATCAAATTTAACAACAATTTCATCATCATCATCAACATCATCATCTTTAAAGAGTAAAAAAAAATCAATAGAAAATTTAAAAAATTCTCTTCTTGTTGTGCCATATAATAATAATAAATCATCATCAACATCAACAACAACAACAACAACAACGACAGGAATTTTAATTGATGATTTAAATAATTCAACAATAAATTCAACAAAAATTAAAAAAGAAAaaaaacaatatatttgtcatatatgtaataaaaattttttaggtattacagatttaaaacgtcatatattagtacatactggtgaaaaaccacatcaatgttcacattgtgaaaaacgttttcgtcaaactgtttgcttaaaaaatcatattgcatctgtacattcagatgattttaaatttaaatgtccaaaatgtccaaagaaatttccaataaaatttcgtttaagattacatatgagagtacattctggtgaaaaaccatataaatgtccaaaatgtccaaaaacatttgccagaggtggACAGTTACGTCAACATAAAGCAACTCATACTGAAAATTATCATAAATGTATTACATGTAATGAAACATTTGATACAAAACCAGATTTACGTAAACATATGCAAAGTCATAATAAACAAGATCATGTTTGTCAAATATGTATGAAATCATTTTCACAACCAGATTTATTACGGGGTCATTTATTTCGAACTCATGCTAATTTAAAATTTTGTACAATTTGTAATAAAGCACTTAAAGGACATTTGTCACAACATTTAAAATTACATGCAAATGAAAAACCTTTTACATGTGATATTTGTGAAGCACAATTTTCACAAAAATCACAATTAAATGTTCATCAGCGTATGCATTCTGGCGAAAGACCATATAAGTGTCCGGTTTGCTGGCAAGCTTTTGCACACAgtacagtattaaaattacatataagaaagcatactggtgaaaaaccatttgcatgttatttatgcaaagaaatgggtattgcattttcacaattggcacatttaaaaacacatatgagaacaatacatcaaacaacaaaaccatatgtatgtgaaggttgtatgggattttataaaataaaagctgatttagaaaaacatcaaaaaaAATGTAAAAAATATGAAGAAAATCAAAAAAATCATAATGATAATAATATTAAAAATATTGATGATTCAACAACATCATCTTCAATATCTTCAACAGATATTTCTAATAATAATAATAATAATAATCAAAATGGTATTTTTAGTAATGTTGGAAATATTAAACAACAAAAATTATCAAAATTACGTTTATTAATTGCTATATTATTAAAAAAAATTTCAACTGAAGAACGTCTTAAACAATTAGGTTTTGAAAAACGTTTAATTGATAATGTTATAATATCAGCATTAAAATTAGCAAATAGAAAATATCATGATGATGATGATAATTCAAATTTAGATAATTTAACACGTTTAAGATTAAATATAGAAGAATTTTTAAATTGGACAGTGCCATCAGCTATAATGACAATCATAAGAAAAGATAAAAATTCAATTGAAGAAATTTTAGAAAATATTGTATCAGCATATCCTCAAGGATAA
Protein Sequence: MDLITIRNIDDLQVNSSAGDANDSAVSLSELSEQSIQNLSRISSENDSLISTTNTTISTKTGTIKTRSSRRKSNIITTGGTTITNEFIPLKIEKQRRSTVNSSITVQSNLTTISSSSSTSSSLKSKKKSIENLKNSLLVVPYNNNKSSSTSTTTTTTTTGILIDDLNNSTINSTKIKKEKKQYICHICNKNFLGITDLKRHILVHTGEKPHQCSHCEKRFRQTVCLKNHIASVHSDDFKFKCPKCPKKFPIKFRLRLHMRVHSGEKPYKCPKCPKTFARGGQLRQHKATHTENYHKCITCNETFDTKPDLRKHMQSHNKQDHVCQICMKSFSQPDLLRGHLFRTHANLKFCTICNKALKGHLSQHLKLHANEKPFTCDICEAQFSQKSQLNVHQRMHSGERPYKCPVCWQAFAHSTVLKLHIRKHTGEKPFACYLCKEMGIAFSQLAHLKTHMRTIHQTTKPYVCEGCMGFYKIKADLEKHQKKCKKYEENQKNHNDNNIKNIDDSTTSSSISSTDISNNNNNNNQNGIFSNVGNIKQQKLSKLRLLIAILLKKISTEERLKQLGFEKRLIDNVIISALKLANRKYHDDDDNSNLDNLTRLRLNIEEFLNWTVPSAIMTIIRKDKNSIEEILENIVSAYPQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -