Basic Information

Gene Symbol
CAMTA1_1
Assembly
GCA_947095535.1
Location
OX352773.1:144935127-144967174[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.7e-39 1.9e-34 119.8 0.7 32 116 63 145 51 145 0.94
2 3 0.46 3.2e+04 -3.5 0.4 14 45 306 337 304 341 0.70
3 3 0.36 2.5e+04 -3.1 0.8 48 87 970 1009 943 1045 0.49

Sequence Information

Coding Sequence
ATGGCAACAACTTCTGTAAAATTTGGTTATGACGATATGGCAGTGTCTATTGAAGCTAGCTATCTTAAATTTAGTGAAAAAGTGTCGAGTTGCATGCCAAAAACTTTTATAAAATTTGATTGTTCTAAAGCAGCCGGTTCAGATTTCTTGCATTTCTTGGAACTTAATGAAGCTAGGCGCAATAGATTCGGACCAAAAAGTGGATCATTATTATTATATTCGAGAAAAAAGGTTCGATATCGACGTGATGGGTATTGTTGGAAAAAACGAAAAGATGGTAAAACAACTAGAGAAGATCATATGAAATTAAAGGTTCAAGGAACTGAGTGCATTTACGGATGTTATGTACATTCAGCTATTTTACCGACATTTCATCGCAGGTGTTACTGGCTATTACAGAATCCGGATATTGTTCTTGTACATTATTTGAACGTTCCATATCCAGATGATAATAAAATGGCAATAATAACACCAAGTCTTTCATTATGGGGTGACAAAAAAGAATGGACAAAAGAAGAGTTAGTCAGTCAATTAAAGCCAATGTTTTTTAGCGAAGATGATCCAGATGGTGGAAATGATATTGAAATATCGACGGCTGAAACAGTTGAAGCTATTGTCAGTCAATTAATGGAAAAACAACGTTTGGCAAGACAAGCTGCTTTAGTTAAACAATTAGAATGTGGTTGTCCGGATTCAACCTGTGCTGATGGTAAATCATGTGCACATCCAATGCGACGTATGGGTAAATCATTAACAGATAAAAGATCTGATGGTAGTAATCAAGTGACAAGTACAACACCAAATGTTTTAGTTGGACCAAGGTTCTATTCACGTTGGGTGGATCAAAGGAATCGTGATTCAGCAACAGATTTAACACAAAAATCTTCAATTGATAATCAATCATCAATGCAATTTCAAGTAATTCCAAATCTTCATTCTCAatcattatctcaacatcatcaacaccaacaacaacagcagcaacaacaacaacatttattaacacgacatcacagttcacatcaattattaccagttaataataataacacttcatcacaaacaccaagcattggtattattggtagaacaacttcaagtcatcatcaacaacaacaacaacaacaacaaaatcatcatcatcAACAATCACAACAACAATTTACCAATGCGTCTAATCAAAGCAATCAAATAAATCGCCACAATATTACAAATAATAATCAAATTAGTCAAATAATCATAAATTCCAATAATTCTAATAATCATTCAAGTTCAACTGGAACAATAACAACAACAACAACAGGAACAGGCACATCAATATATTCACAAAATATATCTACAACATCATCATCAGTATCAAATACTGATCACAGTATTGTTAGTAATCATAATAATAGTAATAATAATAAAAACTCTTCAAATAATTCAACAAATACCCATTCCAATCAACAACAAACATTACAAAATTCAAGTGATACTAATAATCTAACAAATAATCATCATAATACAACGTCTTCAACATCAACATCTTCCTCTTCCTTATCATCAGTTTCATCTGGATCTTCTTCGGCTTCTTCTACATCTTCTTCTTCTGCTTCTTCTTCTGCTTCATCATCCACTTCTTCAATATCATCAGCCTCGACTGTTGTACACCATCATCATTCAAATTCACATCATCCACAGAATCATCATTCCCAACATGGTGTTAGTTCACATcaacagcaacaacagcaatcacaacataataatagtagtaatggtaataatttaacaccacaaatgcaacatcataatatgcattctaatcaacaacaacaacaacaacatcaaacaataattgatagtaatggtgtcaatcaaAGGGTGTCATCATCAAATCTAATTAGTAACGGTTCCCTTGGTCATCGTAACAGTAATAATGTCAATAGTGGTAATGGTACTAACAACAGTTCAGCACCTCCACTTGTTTTAAATTTGTCCCAGTTAATCTTTTGTAACCTTCCTTTGGAATTTAATCCACAATTTCCGTCTAGTGGAATATCTTCCGAAAAAGGCGAAGTATCAGCTGCTGAATCAAGTCCACAGGATAAACAACCTGGATGTACATCTTCGGATGATGAAGATATTGCAGAACAAAATTTAATGAATGAAAATGGTGGTGTTTGCGTAGGGGAATCTGATGCAAAAGTATTAACTTTAGCAGAGCATATAATTGCAGCAATGCCTGAACGAATAAAGAATGAATCAGAAGATATAATGTCATTAAATAGTCCAATGTCTGAATCATTAAATACAAATGATTTAAATGATTCATTTATGGAACCGTTATTGGATTCTCTTCCAAGTTCACAATTTGATCATGAATTTAATTTTGAATTCAGTGATAACAATTATAGATATCATGATGTTAGTACACCATGTTCTAGTTTAAGTCCAGCCAGTTCTGGACCATTACAATCACCAGCAAGTTATTCAATATTACAAGAGCCAACAATGAGTTCACCAAGTCCACCGCCATCAACAAAAGAATTAACAGAATTTTTACATGCATCAAATACATCATTAAGACCATTTGAAGCTGATTTTTCAAATTTAACTCTTACAGATCGAGAACAACGTGAACTTTATGAAGCGGCTAAATGTATACAAAAAGCATATCGTTCATATAAAGGTCGTAAAAAACTTGAAGAACAAGATAAAGAAAGATCAGCAGCAATTGTTATACAAAATTATTATCGTCGTTATAAACAATTTGCATTATATAATAAACAAAGAACTCATGCTGCTTTAATAATACAAAATGGTTATAGATCATATTGTGAAAATAAAAGATTTAAAAAATCACAAAATCATACAGTTACATCAAATGATAGTGGTCAAGATTCACAATGTTTACAAAAATATTATAAAAGTTATCAAAATGATCAACAACAACAACAAAAAAATCAAATAAAAAATGTTGGTAATACTGGTATGACATCAAAAGAAGCAAGTCCATCTGGTCCATTAAAACGAACATATTCTCAAAGAACTCAAAATAAAGCAGCACGTAAAATTCAACAATTTATGAGGCAATCTAAAATGAAACTACAGAGAGAACGAGCCGAAAAAGAGAGGCTGGTGCACCAACGCAGGGCGGAATACCTCCTAAACTTGCAGTATCAAGGACAACAAGAAATGGAAATCACTCCAGAAGTAAAGTAA
Protein Sequence
MATTSVKFGYDDMAVSIEASYLKFSEKVSSCMPKTFIKFDCSKAAGSDFLHFLELNEARRNRFGPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAIITPSLSLWGDKKEWTKEELVSQLKPMFFSEDDPDGGNDIEISTAETVEAIVSQLMEKQRLARQAALVKQLECGCPDSTCADGKSCAHPMRRMGKSLTDKRSDGSNQVTSTTPNVLVGPRFYSRWVDQRNRDSATDLTQKSSIDNQSSMQFQVIPNLHSQSLSQHHQHQQQQQQQQQHLLTRHHSSHQLLPVNNNNTSSQTPSIGIIGRTTSSHHQQQQQQQQNHHHQQSQQQFTNASNQSNQINRHNITNNNQISQIIINSNNSNNHSSSTGTITTTTTGTGTSIYSQNISTTSSSVSNTDHSIVSNHNNSNNNKNSSNNSTNTHSNQQQTLQNSSDTNNLTNNHHNTTSSTSTSSSSLSSVSSGSSSASSTSSSSASSSASSSTSSISSASTVVHHHHSNSHHPQNHHSQHGVSSHQQQQQQSQHNNSSNGNNLTPQMQHHNMHSNQQQQQQHQTIIDSNGVNQRVSSSNLISNGSLGHRNSNNVNSGNGTNNSSAPPLVLNLSQLIFCNLPLEFNPQFPSSGISSEKGEVSAAESSPQDKQPGCTSSDDEDIAEQNLMNENGGVCVGESDAKVLTLAEHIIAAMPERIKNESEDIMSLNSPMSESLNTNDLNDSFMEPLLDSLPSSQFDHEFNFEFSDNNYRYHDVSTPCSSLSPASSGPLQSPASYSILQEPTMSSPSPPPSTKELTEFLHASNTSLRPFEADFSNLTLTDREQRELYEAAKCIQKAYRSYKGRKKLEEQDKERSAAIVIQNYYRRYKQFALYNKQRTHAALIIQNGYRSYCENKRFKKSQNHTVTSNDSGQDSQCLQKYYKSYQNDQQQQQKNQIKNVGNTGMTSKEASPSGPLKRTYSQRTQNKAARKIQQFMRQSKMKLQRERAEKERLVHQRRAEYLLNLQYQGQQEMEITPEVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-