Pnob040713.1
Basic Information
- Insect
- Poecilobothrus nobilitatus
- Gene Symbol
- Iswi
- Assembly
- GCA_947095535.1
- Location
- OX352773.1:32836530-32840038[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-06 0.012 17.6 0.0 3 41 802 841 801 843 0.96 2 2 0.089 4.1e+02 3.1 0.0 3 22 904 924 902 963 0.81
Sequence Information
- Coding Sequence
- ATGTCAGAAGACATCTCTGAAGCTCCAGGAACAAATGAAAATTCCAATGATTCTGCTTCCGAAGAAACATCTGAATCTGGAGGAAAAAGAGAACATGAATTTGATGATAAAATTGAAATGGATAGAGGGAAGCGATTTGATTTTCTTTTAAAACAAACAGAGATTTTTTCTCATTTTATGAGTGGATCAAAATCAGGGGGACCTAAAAAAGGAGCTGTTGGGAGACCGAAAAAAAAGGATAAAGATTTATCAAAAGAAGATAAGATAATAGATCCAGCTGATCACCGCCACCGGAAAACGGAGCAGGAAGAAGATGAAGAACTTTTGGCTGAAGAATTTGCAGAAAAAGCTTTGTTCCGTTTTGAACAGTCACCATCCTACATTAAAGGTGGAGAAAtgagagattatcaaatccgtggtttgaactggatgatatctttgtacgaaaatggtattaatggaatattggcggatgaaatgggtttgggaaaaactttacaaactatatccttattgggatatttGAAGCATTTTAAAAGTGTTCCAGGCCCTCATTTAGTGGTTGTACCCAAATCGACTTTACAAAATTGGATAAATGAATTTGCAAAATGGTGTCCATCTCTACGGGCAGTTTGTTTAATTGGCGATGCTGATACACGTAATACATTTATTCGTGATGTTTTAATGCCTGGGGAGTGGGATGTTTGTGTTACTTCGTATGAAATGTGTATTCGTGAGAAATCTGTATTTAAAAAGTTTAACTggcgttacatggttattgatgaagctcatagaatcaaaaatgaaaaatcaaaactttcagaaattttacgtgaattcaaaagtactaatcgtttattaattactggtacacccttacaaaataatcttcacgaattgtggtccttattgaattttttactccctgatgtgttcaatagttctgaagattttgaTGCTTGGTTTAATACTAACTCTTGTTTGGGAGATAATCAATTAATACAACGTTTGCATGCTGTATTGCAACCATTTTTATTACGTCGTTTAAAAGCTGAAGTAGAAAAATCATTGAAACCTAAAAAAGAAATTAAAATTTTTATTGGGTTAACGAAAATGCAACGTGAATGGTATACCAAAATTTTACTTAAAGATATCGATGTTGTTAATGGTGCAGGAAAAATGGAAAAaatgcgtttacaaaacatattgatgcaattgagaaaatgtacgaatcatccatatttgtttgatggagctgaacctggtccaccatatacaactgatgaacatttagttcaaaatggaggaaaaatggttctattggataaactcttaccaagactaaaagaacaaggttcaagagttttggttttctgtcaaatgacacggatgttggatattttagaggattattgttgctggaggcaatatcagtattgtagattagatggtaaaacagctcacgaagatcgtaacagacagatccaagaatataattcagaaaatagtttaaaattccttttcatgttgtcaacgcgtgctggaggcttgggtattaatttatatacagctgatgttgtaattttatatgattccgattggaatcctcaaatggatctacaagctatggatcgtgcacatcgtattggtcaaaagaagcaagtgcgtgttttccgattaattacagaaaatacagtagaagaaaagatagtggaacgggctgaaattaaattacgattagataaacttgttattcaacaaggtCGCTTGGTTGATAATAGAAATCAGTTAAACAAAGATGAAATGTTAAACATTATTCGTTTTGGTGCTAATCATGTTTTTGCTTCTAAGGATTCCGAAATTACAGAAGAAGACATTGATACTATTTTGGAACGTGGAGAACAAAAAACAGCTCAGTTAAATTCGAAACTTGATGAAATGGGTGAAGGTTCTTTAAGAACTTTTACTGTGGATAATAACGGTGAGGGAAATAAATCTTTATATCAATTTGAAGGTGAAGATTATAGAGAAAAACATAAATTGAATGCAATTGGAAATTGGATTGAACCACCCAAACGTGAAAGAAAGGCTAATTATGCCGTTGACGCATACTTTCGTGAAGCTTTGAGAGTCTCTGAACCAAAAGCTCCTAAAGCGCCAAGACCACCTAAACAGCCAATTGTTCAAGATTTCCAATTTTTTCCACCTCGTTTATTTGAACTTTTGGATCAAGAAATTTACTTTTACCGTAAATCTTTGGGATATCGTGTACCAAAAAATCCGGAATTGGGTTCTGAAGCAGTAAAATCTCAACGAGAGGAACAAAAAAAAATTGATGAGGCAGAACAATTAAATGAAGAGGAAATTGGCGAAAAAGAATCTCTGTTGACACAAGGCTTTACTAATTGGACAAAACGTGATTTTAATCAATTTATAAAAGCAAATGAAAAATACGGTCGCGATGATATTGACAATATAGCTAAAGATGTTGAAGGAAAAACTCCAGAAGAAGTAATTGAATATTCCCAAGTATTTTGGGAACGATGCCATGAATTACAAGATATTGAACGTATTATGGCACAAATTGAAAGAGGAGAGGCTAAAATTCAAAGACGTCAGTCTATTAAGAAAGCTTTGGATCAAAAGATGTCCAGATATCGTGCACCATTCCACCAATTGCGGCTTCAATATGGTAATAATAAGGGTAAAAATTATTCAGAAGTTGAAGATAGATTTTTAGTTTGTATGCTCCATAAACTTGGTTTCGACAAAGAAAATGTATATGAAGAATTAAAAGCTTGCATACGGGCATCGCCACAATTCCGTTTTGATTGGTTTCTTAAATCTCGTACAGCAGTTGAATTACAACGAAGATGTAATACACTTATTACATTAATTGAACGTGAAAATCAAGAATTAGAGGAAAAAGAACGTCAAGAGAAAAAGAAGAAAGCAAATAAGGGAGGCACTGGAAGTGTACCATTACAATCAACGGGGCAAAATAAAAATACACAAAAACGTAAATCTGAAGTATTGGTCAGCGATAAAAATAAAAAGAAAAGAAAATAA
- Protein Sequence
- MSEDISEAPGTNENSNDSASEETSESGGKREHEFDDKIEMDRGKRFDFLLKQTEIFSHFMSGSKSGGPKKGAVGRPKKKDKDLSKEDKIIDPADHRHRKTEQEEDEELLAEEFAEKALFRFEQSPSYIKGGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKSVPGPHLVVVPKSTLQNWINEFAKWCPSLRAVCLIGDADTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKSTNRLLITGTPLQNNLHELWSLLNFLLPDVFNSSEDFDAWFNTNSCLGDNQLIQRLHAVLQPFLLRRLKAEVEKSLKPKKEIKIFIGLTKMQREWYTKILLKDIDVVNGAGKMEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDEHLVQNGGKMVLLDKLLPRLKEQGSRVLVFCQMTRMLDILEDYCCWRQYQYCRLDGKTAHEDRNRQIQEYNSENSLKFLFMLSTRAGGLGINLYTADVVILYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAEIKLRLDKLVIQQGRLVDNRNQLNKDEMLNIIRFGANHVFASKDSEITEEDIDTILERGEQKTAQLNSKLDEMGEGSLRTFTVDNNGEGNKSLYQFEGEDYREKHKLNAIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYFYRKSLGYRVPKNPELGSEAVKSQREEQKKIDEAEQLNEEEIGEKESLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKTPEEVIEYSQVFWERCHELQDIERIMAQIERGEAKIQRRQSIKKALDQKMSRYRAPFHQLRLQYGNNKGKNYSEVEDRFLVCMLHKLGFDKENVYEELKACIRASPQFRFDWFLKSRTAVELQRRCNTLITLIERENQELEEKERQEKKKKANKGGTGSVPLQSTGQNKNTQKRKSEVLVSDKNKKKRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01549516;
- 90% Identity
- iTF_00363194; iTF_00160635;
- 80% Identity
- -