Pnob037051.1
Basic Information
- Insect
- Poecilobothrus nobilitatus
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_947095535.1
- Location
- OX352772.1:339322096-339356650[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-15 3.7e-12 47.6 0.0 1 38 330 368 330 374 0.95 2 2 4e-18 4.2e-15 57.1 0.0 1 43 803 846 803 848 0.95
Sequence Information
- Coding Sequence
- ATGGGACGAAGGAAATGGAAACTCTTTCAAGAAAATCTTTCACGATCACAAACAAATACGAATCCAGATCACTTAAATTTAGAACACAAATACATAGAAAATTTAGAACCATCAATTGCGGCGGAAAATCATATAACAGAGAAAAAAGAATATATAACAAAAAACGAAGCAAAGGATAATTTTGAAAACGATATTCAAATTAAAATAGAAAATAAAATCACCGAAAACCCCAACTCAATAAATAAAACAATTAAAACAGAAATAAATAATTTTAATACAACATTATCAACATCATCATTATCAACATCATCATTATTAGAATTATTAGAAAAGCCATCAATACCAATTGATTGGAAACCAAGTGATAAGTGTTATTTTTGTGTGGACGGTAAACTACTCACAGTGAACGAAAAAGGTGAACTGGTGGCTGAGTCAGGCTCGGCTTTGTCCGAGGCAGAACTCGCCAATAGGTCGACTATTGATACGGATAGCGGTGATTCAAGAAATAGTACACCAGATAATTCAATAGTTAATGTTAAAAAATTAATAGAATCACATCAACAACAACAAAAGAAAAATCAACATCAGCAAACAAGAGATTCACAAAATCCACCGAAAATGACCTCACTTGAATCTATGGCTGCTAGATTAGCTGCTGTTGCATCTATTCATCCAAGATTACCACCTGGTTTTGGTCAATTAAGTCAATTGAGCCAATTAGGACAAATTTATCCAAATTTATATTGTCAACAATTAGCTCAAATTTTACCAACAACACCTACAGCAGAAACATCAATGGCTGCAATTAGTCCATCTAATAAAGATTCACCAAGTCCTCATGATACAGGAGGAGGTGGTGAACAACCTTTAGATTTAAGTTCTAAACCAACACTAAATTCACCATCAATAGCTAGTGGAGAATTAAAACAAACGTCATCCAGACCTAAACCTCGTATAAATCCTGTAATCGCTAATCGTCGTACATATACCGAAGAAGAATTACAAAATGCTTTACAAGACATTATGAGCGGTAAGTTAGGTACACGTCGTGCTGCTGTAGTTTATGGTATACCACGATCAACTCTACGCAATAAGGTGTATAAAATTTCATCAGAACAAAGGCGTGAATCATCAACACCATCATCAGTACATGTATTtgatgctgatgaagatgaaaatgataatgataacgatattgataatgataatgacaatgacaatgataaaattggcttatcagatgatgaaattagtaatgataaACTATTGGAAAGTTCCTTGTTATCTGATCAAGAACAGCCTTCACGTTATACTGCTACTTTACAAAAGCATAGAAATTCAAATAATAGTGGTGGTGGTGGTACAAGTTTAAATGAAGAACAAAATTTAAAATCATTGTCACCTTTAGATTCAGTTACAACAGCATCAAGTACAGCTGCATCTACCGCTTCTAATCAAAACAAAACATTAACACCACAACCATCACAAACACCACCTATTGCACCGAATTGGATGGATCCTAATATATTATTACAAACTTTATTACTATCAGGTTCATTAACTGGCGGTAATGCAAGCGCTGCCGGAGCTATTGCTGGTATAGCAAATTTATTAACATCAACACAAAGTGCAAGTCCTGATCCAGCGACAATGCGAGATATAATAAATGTAATTAAATTACAATTAGAAGAACTAGCGAAAAAATTTTCTAATGATACAAATAATCGAGAAAATTTAAATAATGAAAAAGCGTTGTTGTTAGATTCAATGCAGTTAACTCAAAGTTTAAAACAACAACAACAACTGGGACATTTACATCAACACCATCATCATCAATCACGTTTACCAAAGTCTGATACACCAGAAACTGGATCATCAATTGATATGAATGAAACAAATGAAGATGGTGTAATATTAAAAATTCCGTCCTTTAAACCAGTTGTAGTACCTGCATCTTCATCCTCAACAGCATCTTCAATAAAGAGCTGCGATCAAAATCAAATTTCACCATTATCAACATCAACACATCATTCAATTGCACCTATGTTATCAAGAAGTCCACATCAACCAAATAATATACGTGGAATATCGCCACCGTTAATGCGTCAAAGTAGTGAGTCCCAATCCCCGCCTGATGTATCAATAGGTGAAATAATTGCAAATAGTTTAAATCGTTTTAATCAACAAAGTATCAAAGATAGTAATTTAAATAAATCACATCATTATAACGATTTAAGTGAGCAGTATGCAAAGAGAGCAAGTATATCTGTTATAAAAAATATTGGCGGCACAGATATAACAAAATTTGCTGCAACACCAAATTTATTAAATAATTATCAAAATTCAGCAAATCAATGTGCAGCTGGTAAGGGCACAAGACCCAAACGAGGTAAATATCGAAATTATGATCGTGATAGCTTAACTGAAGCTGTTAAGGCTGTGCAACGAGGTGAAATGTCTGTACATCGCGCTGGTAGTTATTATGGTGTACCACATTCAACATTAGAATATAAAGTAAAAGAAAGGCATTTAATGCGACCTAGAAAACGGGAACCAAAACCACAACCAATTGATGGTGGCGGTAACAGTGGTAGCACATCATCAACAACCAATTCAAAACATTCAAACATTCCAGGTTTAACGGCTGTTAATAATATAGATAAATTAAAAACATCAGTAGGACATCAACAACAAAAAACAATTTTAAAACCAAATCAAACATCAGCATTCCCAAATACATCTCCAAATGGTATGAAAGTACCAATATTTGATCCAGCTTTAACAGCACAATTACAATATTCACCACATTTATTTTGGCAACATCCTGCAGCTGCTGCAGCCGGTTTTAGTACTCTACCAATGGAATTTTCACCGACTGGCCGAACAACATCCACTGGTCCCGGTAATGGATCATCAGGAAATTCAACTGCCACATCTCCCGGACTACAACCAAATCCATTTTCACCAAATACTGATAGTTTTCTTGCAACGCAAATGATGCAACGTTTTCATGAGGAAACACGATTAAATGCTGCTGCAAGTAATAACAGTAAATCACCTTCTTTAACCAGTAGCAATGTTAATATAAATAACAATAGTAGTAATAATATAAACAACAATAATAATTTGACAAATGTGCCTGGTAAAACAGCTCGTGAAATTGCCCAAAGTTTATATGAGAGTGGTACTCAAAATGGATCTTTTTTAGATGATATTATAAGGCAAACATTAGATCGTAAATCAAATAATGATATTCCACATGGAGCATTATTTGATCAATTAATAAAAAATACAAAACCTCCATTATTATCATCATCAAGTACACTAGGAGGATCAACACCATCATCTTCATCCTCATCATCTGAAATTCATTCGCATGCATTAGTAAATGCATTAACAAGTAATAATAAAAGATCAGCCAGTCCAAATAGTTATCCTGTGATTAATATTAAACGAGAACGTTCAAGTTCTCCACAACCACCACCACCACCACCACTAACATCATCTTCTTTATTAAGTAATATTGGTAATAATTTAGTACGTGATCATGAATTACGTAATCACTCAAAACGAATTTTAATTAATGATGAAAATGATTCAACAAATGATACTAAATTAATTAGCGATTCAACTTCAGCTGCAGAAAGTTTAATTAAAGCCCGTTTAGAGGGTATTATGATTAAAACAGAACAACAAACAAATGAACATCACATTACATCAGATTCAATATCACAAAGACATCACACAAATACATCATCATCCTCATCAGAATTTAATACAAATAATACAAATAATTCAACTGGTCCAGTGAATATTAGTCATTCTATTATCTTAGAAGATTTAAATGGTAGAAATAATGGAGAAGGTAGTAATACAGGTAGTGGTATAAGAACTGATAATGAATTAATAAATAAGGATAATAGTAGAGGAGCTGTTGCAGCTAATAATATTATATCCAGTGATGATCATATTCTTAAAAGTAAATTAGGTCTTATAAAATCCGAAACGGATCAAAACTTATAG
- Protein Sequence
- MGRRKWKLFQENLSRSQTNTNPDHLNLEHKYIENLEPSIAAENHITEKKEYITKNEAKDNFENDIQIKIENKITENPNSINKTIKTEINNFNTTLSTSSLSTSSLLELLEKPSIPIDWKPSDKCYFCVDGKLLTVNEKGELVAESGSALSEAELANRSTIDTDSGDSRNSTPDNSIVNVKKLIESHQQQQKKNQHQQTRDSQNPPKMTSLESMAARLAAVASIHPRLPPGFGQLSQLSQLGQIYPNLYCQQLAQILPTTPTAETSMAAISPSNKDSPSPHDTGGGGEQPLDLSSKPTLNSPSIASGELKQTSSRPKPRINPVIANRRTYTEEELQNALQDIMSGKLGTRRAAVVYGIPRSTLRNKVYKISSEQRRESSTPSSVHVFDADEDENDNDNDIDNDNDNDNDKIGLSDDEISNDKLLESSLLSDQEQPSRYTATLQKHRNSNNSGGGGTSLNEEQNLKSLSPLDSVTTASSTAASTASNQNKTLTPQPSQTPPIAPNWMDPNILLQTLLLSGSLTGGNASAAGAIAGIANLLTSTQSASPDPATMRDIINVIKLQLEELAKKFSNDTNNRENLNNEKALLLDSMQLTQSLKQQQQLGHLHQHHHHQSRLPKSDTPETGSSIDMNETNEDGVILKIPSFKPVVVPASSSSTASSIKSCDQNQISPLSTSTHHSIAPMLSRSPHQPNNIRGISPPLMRQSSESQSPPDVSIGEIIANSLNRFNQQSIKDSNLNKSHHYNDLSEQYAKRASISVIKNIGGTDITKFAATPNLLNNYQNSANQCAAGKGTRPKRGKYRNYDRDSLTEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPIDGGGNSGSTSSTTNSKHSNIPGLTAVNNIDKLKTSVGHQQQKTILKPNQTSAFPNTSPNGMKVPIFDPALTAQLQYSPHLFWQHPAAAAAGFSTLPMEFSPTGRTTSTGPGNGSSGNSTATSPGLQPNPFSPNTDSFLATQMMQRFHEETRLNAAASNNSKSPSLTSSNVNINNNSSNNINNNNNLTNVPGKTAREIAQSLYESGTQNGSFLDDIIRQTLDRKSNNDIPHGALFDQLIKNTKPPLLSSSSTLGGSTPSSSSSSSEIHSHALVNALTSNNKRSASPNSYPVINIKRERSSSPQPPPPPPLTSSSLLSNIGNNLVRDHELRNHSKRILINDENDSTNDTKLISDSTSAAESLIKARLEGIMIKTEQQTNEHHITSDSISQRHHTNTSSSSSEFNTNNTNNSTGPVNISHSIILEDLNGRNNGEGSNTGSGIRTDNELINKDNSRGAVAANNIISSDDHILKSKLGLIKSETDQNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -