Pnob040612.2
Basic Information
- Insect
- Poecilobothrus nobilitatus
- Gene Symbol
- kn
- Assembly
- GCA_947095535.1
- Location
- OX352773.1:29853051-29857350[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-119 1.4e-114 385.5 0.0 205 385 1 209 1 212 0.99 2 2 2.4e-11 5.7e-07 30.2 14.6 422 515 212 307 208 326 0.81
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAGGTTGTGATAGCAACACAAGTTAGTGTTGAAGGACCATTATTAGCTATATCTGATAATATGTTTGTTCATAATAATTCAAAACATGGTAGACGAGCAAAACGTTTGGATGCAACGGAAGGTACTGGAAATTCTCCTTTGTCCATAACGGGTCATCCCCTTGCACCTGACAGTACATACGACGGTTTATATCCACCATTACCAGTTGCAACACCATGTATTAAAGCGATATCACCAAGTGAAGGTTGGACAACTGGTGGTGCTACTGTTATTATTGTTGGTGATAATTTCTTTGATGGCCTTCAAGTTGTATTTGGTACAATGTTAGTATGGAGTGAATTATTAACATCACATGCAATAAGAGTTCAAACACCACCACGTCATATACCAGGTGTTGTAGAAGTAACATTATCATATAAAAGTAAACAATTTTGTAAAGGATCACCCGGACGTTTTGTATATGTTTCATTAAATGAACCAACAATAGATTATGGATTTCAACGATTACAAAAATTGATACCAAGACATCCTGGCGATCCAGAAAAATTACAAAAAGAAATTATATTAAAGCGTGCTGCTGATTTAGTTGAAGCTTTATATTCAATGCCAAGATCACCAAGTGGAACATCTAGTTTTAATGCATATACTGGACAATTAGCTGTTAGTGTTCAAGATGGTACTGGTCAATGGACTGAAGATGAATATCAAAGAAATCAAAGTAGCAGTGTTAGTCCACGTGGTGGTTATTGTAGTAGTGCATCAACACCACATTCATCAGGTGGTTCATATGGTACAACAGCAAATGGTTATGGTTCAACAGCAAATATGGGTACATTATCATCATCACCTGGAAGTGTTTTTAATTCAACGTCGACCAGTGCCTTTTCACCACTTATaacatcggcaacatcacatcaatggcatcatagtttggtaccaccaccacatccaccaccaacatctggtgcacatcatcatcattctggtcatcctggacatcatcattatcatcatcatcaatcatggcataatcctcAAACAACTGTGGCTGCTACCGTTATATAA
- Protein Sequence
- MRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDATEGTGNSPLSITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELLTSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPSGTSSFNAYTGQLAVSVQDGTGQWTEDEYQRNQSSSVSPRGGYCSSASTPHSSGGSYGTTANGYGSTANMGTLSSSPGSVFNSTSTSAFSPLITSATSHQWHHSLVPPPHPPPTSGAHHHHSGHPGHHHYHHHQSWHNPQTTVAATVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01116233;
- 90% Identity
- iTF_00893648;
- 80% Identity
- -