Pnob050742.1
Basic Information
- Insect
- Poecilobothrus nobilitatus
- Gene Symbol
- retn_1
- Assembly
- GCA_947095535.1
- Location
- OX352773.1:187866181-187877728[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2 2.2e+04 -2.2 0.0 23 33 7 17 3 22 0.77 2 2 1.2e-15 8.4e-12 47.2 0.0 15 79 45 107 25 108 0.90
Sequence Information
- Coding Sequence
- ATGGTTATGGAATACCCACCTCCTGTAATGCAATCTAAAATAGTTGACCTAAATTGGATGAAAAGTGATCTACTACTTGTGATCTATGAGTTTTGTATTGGTAAACAGGACACTGCTCCATTAGCTTACATGCTAGAAGGTACACCAATAAATCGTCTTCCAATAATGGCAAAATCTGTTTTAGATTTATATGAATTATATAATTTGGTAATAGCACGTGGTGGTTTAGTTGATGTGATAAATAAAAAATTATGGCAAGAAATAATAAAAGGTCTTCATTTACCATCAAGTATaacaagtgctgcatttacattaagaacacagtaa
- Protein Sequence
- MVMEYPPPVMQSKIVDLNWMKSDLLLVIYEFCIGKQDTAPLAYMLEGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -