Pnob065463.1
Basic Information
- Insect
- Poecilobothrus nobilitatus
- Gene Symbol
- -
- Assembly
- GCA_947095535.1
- Location
- OX352774.1:175780897-175783970[+]
Transcription Factor Domain
- TF Family
- Nrf1
- Domain
- Nrf1_DNA-bind domain
- PFAM
- PF10491
- TF Group
- Basic Domians group
- Description
- In Drosophila, the erect wing (ewg) protein is required for proper development of the central nervous system and the indirect flight muscles. The fly ewg gene encodes a novel DNA-binding domain that is also found in four genes previously identified in sea urchin, chicken, zebrafish, and human [1]. Nuclear respiratory factor-1 is a transcriptional activator that has been implicated in the nuclear control of respiratory chain expression in vertebrates. The first 26 amino acids of nuclear respiratory factor-1 are required for the binding of dynein light chain. The interaction with dynein light chain is observed for both ewg and Nrf-1, transcription factors that are structurally and functionally similar between humans and Drosophila [2]. The highest level of expression of both ewg and Nrf-1 was found in the central nervous system, somites, first branchial arch, optic vesicle, and otic vesicle. In the mouse Nrf-1 protein, Swiss-Prot:Q8C4C0 there is also an NLS domain at 88-116, and a DNA binding and dimerisation domain at 127-282. Ewg is a site-specific transcriptional activator, and evolutionarily conserved regions of ewg contribute both positively and negatively to transcriptional activity [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.7e-15 6.1e-11 44.4 0.0 109 209 9 105 2 109 0.84 2 5 0.84 2.9e+04 -3.6 1.2 106 143 314 351 287 363 0.51 3 5 0.19 6.5e+03 -1.5 0.0 15 33 495 513 489 524 0.76 4 5 2 7e+04 -4.9 8.4 83 112 540 569 527 590 0.59 5 5 0.8 2.8e+04 -3.6 0.6 103 122 822 841 793 865 0.48
Sequence Information
- Coding Sequence
- ATGGATGACAGTGATGATTCAGTAAATAATATGGTATCAAATTTACCATTATTATTTGCTAACGGATATCCAACATCTTTAGAAAAAATTACTGAAACACAAATACAAAAATTTATACCATTTATGGTACAATGTTCTTTAGGTAATATAAATGTACCGGGTAAAGAAGAATATAATGAACCAGAATGGTGGCCAGAAGATATAGAATTTACAATACCTATAACAAGACCAAAAAAGTTTCAAGGGGATTGGTTGCATAAAATGAAAGAAATTGTAAAAATTTGTTATCAATTTCATAAAAGTATATTTTTATTACGATTTTGTAATGATTTAGCAGCATATGAACATACTTGGTTACGCTTTATTAATAATCATAATTCAACGACATCTTTATACGATAGACGATGTAACAAATTATTGGTAACATTCCGTAATGAGAATATGACATATGATCAACCACCGCTAAAGCGTAAATGTTTGCTTCAACAAAAGACAAGGACTCAAAATGATAATAATCAACAACAAATGGTTGAACAATCACTTTTTGACATATATTTATGTGATAATTGTGATGCAGAACTGTATTCTTCAGAAGCATATAAAAAACATGAAAAAATTTGTACTTCGGATGATGATGATGTAATATTTTGCAATTCAACAATACCTGTAATTAGTTCAACATATTCTTGTAATGATGAGGCGTCATCCACCCGAAAAGAATCAAATACTGTTAGTGAAGAATCATGTAGAGATTTTTTATTAAATTTTCAATTACTCAGTAAAAAATGTTTAGAAAGGACACAATCATTATCACCATCGATAGAATATCATTCAACATCAAATAATGAAGATAGTAATAATAGCAATAATAGTAACACAAATAGTTTAAGTAATAATAATAACAATAATAATAATAATAATTTTAACAAAAATAATATCCATAAAAATAAGAATAATAATAATAATATTAATAACAAATTAACCAAAGAAATCAACAATCCCACAAGAAAGCCAGGTAGACCAAGAGTACATAATTTAGAGGATAATATAATTGATCATCATGATAGAAAAACAAAAGTAACAAGAAATAATCGAACAATTTATGCCTTGACACGATGTCCAAACATTCCATTTTCATCACCAGCTGGACAATTGCTTATTAGAACTTTTAGATCTTATGTTCATAAAGAATATTTAACAGAACGTTTAGATCGTGTTGAAAGATTTTGTGCTACACCAATATTACAAAGTGGTTGTCAACGTCCTGCTAAATTTTTTGGTAAACAACGTTATTCATCAATACACAATATTAATTGTACCTATAAAAAACCACAAGAATATTCAACACATAAATATATATTTCCCCGGAGGCAGTACTTTAGTCAATACCGTGCTGATAGTTTAAAGTTCCTAAATGATTTAATATTGAAAAAACGCTGCCGGCCAATAACAGTAAGATTAAGAAAAATTACTGATAGTGAAATAAAAAGAAAACGACGATCGTCATTTAGTAGTAATAATTCAATTGTTAATTCTGATTTGAATATTAAACTTATACGTGATCAGTCTCATGGTTCAACAAAATGGAAAATAACACATCAACAACAACAAATACAGCAACAACAGCAACAAAATCGTCAACAAAAGATTAATCAAGAATTGCAGCAACAACAACCACAACAACAACAACAACAACCACAACAACAAAAAACTGTTATTAAGCCACAAAGACAAAAGAATTATGTAGAAAATTTAATAATTGAAGAAACAATAGATTTATGTTCATCAGATGAAGAATTAGACCAAAATTCAAATGATGCTACTAGATCTAAATTTTTTATAAATAGTAGTTTTCCACTTGCTCAAATAATACCTGTACAAGGTATTCAAAATAATAAAGATTATAATGTTAGTGAAAATGGTATAATTGTTAATGATGACGACGACGATGATGATGATGTTTTACAAATTGTTGATGAATGTCCTGTACAATTAGATCATCTTATTAAACCAACTCATTTAAATGTTTTACAATTTGCATCTGGTAAACCACCCCGATTAGAAGTTCAAACATTATTACAAAAATTAAATAGTGAAAATGAAATTACAGTAACCCCATTAAAAAAAGTATTAGATCCATTAGCATTAACACCAATAGAATCATCTAGTAATATAATATTATCAAGAACATCTATACAAAATACATATAATGCATCAAATATTATTGAAGAAATTCGTAAACAAAATAAATATGAAAAAAATTTCTTAACATCAAATATTACAAATCAAAGTAAACCAATGCAACCATCTGTGTTTTTATTTTCAAATTATACTGCAAATTCAACTGGTTCAAATAATACAACACCTACAACAACAATGATTTTACAACAACAAATTAATAATGATCTAAATAGTAATAGTAATAATCAAGAAAATTTAATTGATAATTCTAATAATAGTAATAATTTATATAAAAATAAAAATACAGATGATATATGGTTGCCAAATAATAATATTAATAATAATTTAAATAATAATATTAGTAATTTAACAACAACTTCAACAAATATTAATAATAATTCATCATTAAATCATCTTAGACAAAATAATTTAAATTCAGTTATAACAAATTCGCCATTATTATTAAATACAGCATCTCAATTACATAATCCAGCCGCTGTTGTTGCTCAGGCTACAAATGTTACAGCAAATAAATTATTACAATGGCAAATTAATTCACCAAATCGGCCATTTTCTGTTGATTTGACATTATAA
- Protein Sequence
- MDDSDDSVNNMVSNLPLLFANGYPTSLEKITETQIQKFIPFMVQCSLGNINVPGKEEYNEPEWWPEDIEFTIPITRPKKFQGDWLHKMKEIVKICYQFHKSIFLLRFCNDLAAYEHTWLRFINNHNSTTSLYDRRCNKLLVTFRNENMTYDQPPLKRKCLLQQKTRTQNDNNQQQMVEQSLFDIYLCDNCDAELYSSEAYKKHEKICTSDDDDVIFCNSTIPVISSTYSCNDEASSTRKESNTVSEESCRDFLLNFQLLSKKCLERTQSLSPSIEYHSTSNNEDSNNSNNSNTNSLSNNNNNNNNNNFNKNNIHKNKNNNNNINNKLTKEINNPTRKPGRPRVHNLEDNIIDHHDRKTKVTRNNRTIYALTRCPNIPFSSPAGQLLIRTFRSYVHKEYLTERLDRVERFCATPILQSGCQRPAKFFGKQRYSSIHNINCTYKKPQEYSTHKYIFPRRQYFSQYRADSLKFLNDLILKKRCRPITVRLRKITDSEIKRKRRSSFSSNNSIVNSDLNIKLIRDQSHGSTKWKITHQQQQIQQQQQQNRQQKINQELQQQQPQQQQQQPQQQKTVIKPQRQKNYVENLIIEETIDLCSSDEELDQNSNDATRSKFFINSSFPLAQIIPVQGIQNNKDYNVSENGIIVNDDDDDDDDVLQIVDECPVQLDHLIKPTHLNVLQFASGKPPRLEVQTLLQKLNSENEITVTPLKKVLDPLALTPIESSSNIILSRTSIQNTYNASNIIEEIRKQNKYEKNFLTSNITNQSKPMQPSVFLFSNYTANSTGSNNTTPTTTMILQQQINNDLNSNSNNQENLIDNSNNSNNLYKNKNTDDIWLPNNNINNNLNNNISNLTTTSTNINNNSSLNHLRQNNLNSVITNSPLLLNTASQLHNPAAVVAQATNVTANKLLQWQINSPNRPFSVDLTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -