Basic Information

Insect: Pocota personata
Gene Symbol: ZEB2
Assembly: GCA_963082735.1
Location: OY720429.1:16150594-16153873[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.4e-05 0.021 16.9 3.5 2 23 231 252 230 253 0.94

2 11 0.00066 0.16 14.1 0.2 1 21 323 343 323 344 0.95

3 11 3.5e-07 8.7e-05 24.4 0.2 1 23 352 374 352 374 0.98

4 11 0.00063 0.16 14.2 0.3 1 23 378 401 378 401 0.91

5 11 6.3e-07 0.00016 23.6 1.0 2 23 408 429 407 429 0.98

6 11 1.1e-06 0.00027 22.9 0.5 1 23 435 457 435 457 0.95

7 11 6.1e-06 0.0015 20.5 1.2 1 23 463 485 463 485 0.99

8 11 1.6e-05 0.0041 19.2 0.7 1 23 491 513 491 513 0.97

9 11 0.00019 0.047 15.8 1.0 1 23 519 541 519 541 0.98

10 11 0.0011 0.26 13.5 2.9 1 23 547 569 547 569 0.99

11 11 4.9e-06 0.0012 20.8 0.4 1 23 575 597 575 597 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.4e-05	0.021	16.9	3.5	2	23	231	252	230	253	0.94
2	11	0.00066	0.16	14.1	0.2	1	21	323	343	323	344	0.95
3	11	3.5e-07	8.7e-05	24.4	0.2	1	23	352	374	352	374	0.98
4	11	0.00063	0.16	14.2	0.3	1	23	378	401	378	401	0.91
5	11	6.3e-07	0.00016	23.6	1.0	2	23	408	429	407	429	0.98
6	11	1.1e-06	0.00027	22.9	0.5	1	23	435	457	435	457	0.95
7	11	6.1e-06	0.0015	20.5	1.2	1	23	463	485	463	485	0.99
8	11	1.6e-05	0.0041	19.2	0.7	1	23	491	513	491	513	0.97
9	11	0.00019	0.047	15.8	1.0	1	23	519	541	519	541	0.98
10	11	0.0011	0.26	13.5	2.9	1	23	547	569	547	569	0.99
11	11	4.9e-06	0.0012	20.8	0.4	1	23	575	597	575	597	0.99

Sequence Information

Coding Sequence: ATGTCGTTGGAAATCACTAAAATCTGTCGGACTTGCTTAGCGCTGGAAGGCACACTTCTATCCATTTACGATAGCAAAGGCTCTTCAGGTCATGGTTGCGTCGCAGATATGCTTGGAGACTTAACCAGCATCCCACCCAAAAAATCCGATGGAATGCCCGAGAAAGTCTGCATCGCGTGCATTAGTGAAATCAATCGATGCTATTCGTTCAAAATGAAATGCGACAACTCGGACAGAACACTCAGGCAACTCCTTAATATTACCGGAGAATGTGTGGAACACGAGGAGAAGGTAGAGTTCAAAACCGAAACAATTACTCTGTGCAAGCTGTTCAATGAGAAAAAGAAGCCACAAAAGCGAAAAGCAGACACCAGCTTGAGAGTACTCAACGAAGAATTTGAGCAAGAGCAATCTGGTGGATCGAATGAGATTTACTCTGTACAAACTGAAGGGGAGTTGGAAGCTTCTTACTTTGTCACTGGTTCGGGCGAGGAGGAGAGCGAATGTGACGAAGAGAAACAAGAATATCAGAACGAGAGCAAGTCGGACGTGTATGAGGAATTGCTCCACAAATTCGTTACTCAGCCGCAAGAAAACGAAGAGGAAGATGAGGTTATGGATGAGATTGACGATTCTGATGCATACAAACCGGCATCAAGACGATCAGCTCCACGGAAGAAAGAAGAACTCAAGTGTCAATCGTGCCCCATGACTTTCGTTCATCCAAGGAATCTAGCCAAACACATGACCAAGCATCATAACTTGTGTGAATTAACATACGGTCAACAAGAACAGCCACCAGAGTCCGTTAGCAAGAATAAAGTAAAACAGGAACCCGCTCAGTCTCCGCCGGCAGAGGAACATGAAGATTTCGAGGTGGAGTTTCAGTCGATTGAGGATGATGAGACAACTGCTGTCGAGGAACCTGAACTTCTGAAAGAAATTATTGAAGTGCAGATGCACAGCCATCGCTGTCCATATTGTGCAGCAGGCTTTGCGCAGCAAAAATCACTGAATATCCACATCAAGCAGAGCAAGTGCACTGAGAAGCAGTACGCTTGCTCAAAGTGTCAGAAAGTGTTTATTTCGCCAGAGAGCCTTAGCGCGCACATTCGAACTCACAAGGAGGTGTTTATTTGCGATATCTGTGGACACACATTCAACCAGAAGGAAGAAATTGACGAGCACATGGCAGACAAACACAACCTTAAGGCTAAGAATAAATGTCCGACGTGCAAGAAAGTTTTCTCGATGCTCTCATCACTCAAGGACCACATGCGAATTCACAGCGGTGAAAGACCATTCCTCTGCTCACTTTGTGGCAAGGGCTTTAGTCAGAATGCCAATCTTAAACAACACGTGATGCGGCACAATAAAAACAAGCCTTTCAAGTGTGATCAGTGTTCTCGGTCATTTGTCAGCAAAGGAGAACTCTACTCACATGTTCGTAGCCACACCGGCGATCAACCATTCGCCTGTGACTTCTGCAAGGCGGCATTCACGACTTCCAGCTCTTTGGTGAAACACAAACGGATACACACCGGAGAGCGACCGTATGCCTGTGAGTTTTGCCCTATGCGATTTACCGCACTGAACACCCTCAAAAACCACCGAAGGACGCACACTGGCGAAAAGCCATATAAATGCAAGTTCTGTGAACGAGGATTCGCCCAGAGGAGCGACTGCGGGATTCACATGCGAACGCACACTGGCGAACGAAGGTACGTCTGTCAAGTTTGCGGCTCAGCATTCCAGCAGTCAGGTACCCTGCGAACCCACATGAAAACCCACAGAAGTAGGAAGGCAGAATTCGAGGAGGAAGAAATGGACGAAGAACAGCCACAAGAAGAAATGGATGGACAGAAGAAGGCGACCACTTCGATGGAAGTATCAGTGGAGCTGGCCGAGGATGACCTCCTTAACTTTGCCATTGAAGAGTGTTCCAGTGAGAACAACGATTTCAGTGGTGAATAA
Protein Sequence: MSLEITKICRTCLALEGTLLSIYDSKGSSGHGCVADMLGDLTSIPPKKSDGMPEKVCIACISEINRCYSFKMKCDNSDRTLRQLLNITGECVEHEEKVEFKTETITLCKLFNEKKKPQKRKADTSLRVLNEEFEQEQSGGSNEIYSVQTEGELEASYFVTGSGEEESECDEEKQEYQNESKSDVYEELLHKFVTQPQENEEEDEVMDEIDDSDAYKPASRRSAPRKKEELKCQSCPMTFVHPRNLAKHMTKHHNLCELTYGQQEQPPESVSKNKVKQEPAQSPPAEEHEDFEVEFQSIEDDETTAVEEPELLKEIIEVQMHSHRCPYCAAGFAQQKSLNIHIKQSKCTEKQYACSKCQKVFISPESLSAHIRTHKEVFICDICGHTFNQKEEIDEHMADKHNLKAKNKCPTCKKVFSMLSSLKDHMRIHSGERPFLCSLCGKGFSQNANLKQHVMRHNKNKPFKCDQCSRSFVSKGELYSHVRSHTGDQPFACDFCKAAFTTSSSLVKHKRIHTGERPYACEFCPMRFTALNTLKNHRRTHTGEKPYKCKFCERGFAQRSDCGIHMRTHTGERRYVCQVCGSAFQQSGTLRTHMKTHRSRKAEFEEEEMDEEQPQEEMDGQKKATTSMEVSVELAEDDLLNFAIEECSSENNDFSGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -